RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 A0A0G2JS52 829 aa14.28□□□□□ -0.12
GTF3C1-213ENST00000571886 MYT1Q01538 1121 aa14.28□□□□□ -0.12
GTF3C1-213ENST00000571886 CDCA8Q53HL2 280 aa14.28□□□□□ -0.12
GTF3C1-213ENST00000571886 POLR3GLQ9BT43 218 aa14.28□□□□□ -0.12
GTF3C1-213ENST00000571886 OVOS2A0A0J9YW53 1432 aa14.27□□□□□ -0.12
GTF3C1-213ENST00000571886 OVOS2Q6IE36 1432 aa14.27□□□□□ -0.12
GTF3C1-213ENST00000571886 FYB1O15117 783 aa14.27□□□□□ -0.13
GTF3C1-213ENST00000571886 FAM182BQ5T319 152 aa14.27□□□□□ -0.13
GTF3C1-213ENST00000571886 THSD7AQ9UPZ6 1657 aa14.26□□□□□ -0.13
GTF3C1-213ENST00000571886 KRT27Q7Z3Y8 459 aa14.26□□□□□ -0.13
GTF3C1-213ENST00000571886 GGNBP2Q9H3C7 697 aa14.26□□□□□ -0.13
GTF3C1-213ENST00000571886 LTN1O94822 1766 aa14.26□□□□□ -0.13
GTF3C1-213ENST00000571886 BARGINQ6ZT62 677 aa14.24□□□□□ -0.13
GTF3C1-213ENST00000571886 TCP11L2Q8N4U5 519 aa14.24□□□□□ -0.13
GTF3C1-213ENST00000571886 EP400Q96L91 3159 aa14.23□□□□□ -0.13
GTF3C1-213ENST00000571886 TOM1L2Q6ZVM7 507 aa14.23□□□□□ -0.13
GTF3C1-213ENST00000571886 COG3Q96JB2 828 aa14.23□□□□□ -0.13
GTF3C1-213ENST00000571886 CRB1P82279 1406 aa14.23□□□□□ -0.13
GTF3C1-213ENST00000571886 WDR17Q8IZU2 1322 aa14.22□□□□□ -0.13
GTF3C1-213ENST00000571886 NSD3Q9BZ95 1437 aa14.22□□□□□ -0.13
GTF3C1-213ENST00000571886 KIF20BQ96Q89 1820 aa14.21□□□□□ -0.13
GTF3C1-213ENST00000571886 THRAP3Q9Y2W1 955 aaKnown RBP14.21□□□□□ -0.13
GTF3C1-213ENST00000571886 MAP3K19Q56UN5 1328 aa14.2□□□□□ -0.14
GTF3C1-213ENST00000571886 CSB-PGBD3P0DP91 1061 aa14.2□□□□□ -0.14
GTF3C1-213ENST00000571886 RRS1Q15050 365 aaKnown RBP14.2□□□□□ -0.14
GTF3C1-213ENST00000571886 PANK3Q9H999 370 aa14.2□□□□□ -0.14
GTF3C1-213ENST00000571886 DEFB132Q7Z7B7 95 aa14.19□□□□□ -0.14
GTF3C1-213ENST00000571886 IP6K1Q92551 441 aa14.19□□□□□ -0.14
GTF3C1-213ENST00000571886 CARD10Q9BWT7 1032 aa14.19□□□□□ -0.14
GTF3C1-213ENST00000571886 ERBB3P21860 1342 aa14.18□□□□□ -0.14
GTF3C1-213ENST00000571886 ANKRD24Q8TF21 1146 aa14.18□□□□□ -0.14
GTF3C1-213ENST00000571886 LTV1Q96GA3 475 aaPredicted RBP14.18□□□□□ -0.14
GTF3C1-213ENST00000571886 KIF7Q2M1P5 1343 aa14.17□□□□□ -0.14
GTF3C1-213ENST00000571886 ABCC6O95255 1503 aa14.17□□□□□ -0.14
GTF3C1-213ENST00000571886 HOXC9P31274 260 aa14.17□□□□□ -0.14
GTF3C1-213ENST00000571886 CCDC125Q86Z20 511 aa14.17□□□□□ -0.14
GTF3C1-213ENST00000571886 PARP4Q9UKK3 1724 aaKnown RBP14.17□□□□□ -0.14
GTF3C1-213ENST00000571886 WNK3Q9BYP7 1800 aa14.17□□□□□ -0.14
GTF3C1-213ENST00000571886 RGPD2P0DJD1 1756 aa14.17□□□□□ -0.14
GTF3C1-213ENST00000571886 BLMP54132 1417 aaPredicted RBP14.16□□□□□ -0.14
GTF3C1-213ENST00000571886 AMPHP49418 695 aa14.16□□□□□ -0.14
GTF3C1-213ENST00000571886 PDE3BQ13370 1112 aa14.16□□□□□ -0.14
GTF3C1-213ENST00000571886 NLRP2Q9NX02 1062 aa14.16□□□□□ -0.14
GTF3C1-213ENST00000571886 PEAK1Q9H792 1746 aa14.15□□□□□ -0.14
GTF3C1-213ENST00000571886 DISP2A7MBM2 1401 aa14.15□□□□□ -0.14
GTF3C1-213ENST00000571886 MAP2P11137 1827 aaKnown RBP14.14□□□□□ -0.15
GTF3C1-213ENST00000571886 TRIM37O94972 964 aa14.14□□□□□ -0.15
GTF3C1-213ENST00000571886 LRRC37A3O60309 1634 aa14.14□□□□□ -0.15
GTF3C1-213ENST00000571886 CGNL1Q0VF96 1302 aa14.14□□□□□ -0.15
GTF3C1-213ENST00000571886 DDB1Q16531 1140 aa14.13□□□□□ -0.15
GTF3C1-213ENST00000571886 HSP90AB2PQ58FF8 381 aa14.13□□□□□ -0.15
GTF3C1-213ENST00000571886 FAM196AQ6ZSG2 479 aa14.13□□□□□ -0.15
GTF3C1-213ENST00000571886 MARCH10Q8NA82 808 aaPredicted RBP14.13□□□□□ -0.15
GTF3C1-213ENST00000571886 EMILIN1Q9Y6C2 1016 aa14.13□□□□□ -0.15
GTF3C1-213ENST00000571886 CCDC7Q96M83 1385 aa14.12□□□□□ -0.15
GTF3C1-213ENST00000571886 TNNT2P45379 298 aaPredicted RBP14.11□□□□□ -0.15
GTF3C1-213ENST00000571886 EN1Q05925 392 aaPredicted RBP14.11□□□□□ -0.15
GTF3C1-213ENST00000571886 SF3B2Q13435 895 aaKnown RBP14.11□□□□□ -0.15
GTF3C1-213ENST00000571886 PTF1AQ7RTS3 328 aa14.11□□□□□ -0.15
GTF3C1-213ENST00000571886 TNS1Q9HBL0 1735 aaKnown RBP14.11□□□□□ -0.15
GTF3C1-213ENST00000571886 SBF2Q86WG5 1849 aa14.11□□□□□ -0.15
GTF3C1-213ENST00000571886 ANKRD26Q9UPS8 1709 aa14.1□□□□□ -0.15
GTF3C1-213ENST00000571886 NBPF6Q5VWK0 638 aa14.1□□□□□ -0.15
GTF3C1-213ENST00000571886 NBPF4Q96M43 638 aa14.1□□□□□ -0.15
GTF3C1-213ENST00000571886 POLKQ9UBT6 870 aa14.1□□□□□ -0.15
GTF3C1-213ENST00000571886 WASHC2AQ641Q2 1341 aa14.1□□□□□ -0.15
GTF3C1-213ENST00000571886 RGPD1P0DJD0 1748 aa14.1□□□□□ -0.15
GTF3C1-213ENST00000571886 EXOC5O00471 708 aa14.09□□□□□ -0.15
GTF3C1-213ENST00000571886 IL2RBP14784 551 aa14.09□□□□□ -0.15
GTF3C1-213ENST00000571886 USHBP1Q8N6Y0 703 aa14.09□□□□□ -0.15
GTF3C1-213ENST00000571886 CDCA7Q9BWT1 371 aaPredicted RBP14.09□□□□□ -0.15
GTF3C1-213ENST00000571886 FAM208AQ9UK61 1670 aaKnown RBP14.09□□□□□ -0.15
GTF3C1-213ENST00000571886 RTL1A6NKG5 1358 aa14.09□□□□□ -0.15
GTF3C1-213ENST00000571886 PPM1GO15355 546 aaPredicted RBP14.08□□□□□ -0.16
GTF3C1-213ENST00000571886 PER1O15534 1290 aaPredicted RBP14.08□□□□□ -0.16
GTF3C1-213ENST00000571886 INSRP06213 1382 aa14.08□□□□□ -0.16
GTF3C1-213ENST00000571886 APBA3O96018 575 aa14.07□□□□□ -0.16
GTF3C1-213ENST00000571886 BAG6P46379 1132 aa14.07□□□□□ -0.16
GTF3C1-213ENST00000571886 EZH2Q15910 746 aaKnown RBP14.07□□□□□ -0.16
GTF3C1-213ENST00000571886 AMER1Q5JTC6 1135 aaPredicted RBP14.07□□□□□ -0.16
GTF3C1-213ENST00000571886 FLT4P35916 1363 aa14.07□□□□□ -0.16
GTF3C1-213ENST00000571886 CAMKK2Q96RR4 588 aa14.06□□□□□ -0.16
GTF3C1-213ENST00000571886 KNSTRNQ9Y448 316 aa14.06□□□□□ -0.16
GTF3C1-213ENST00000571886 OVOS2A0A0G2JMS6 1433 aa14.06□□□□□ -0.16
GTF3C1-213ENST00000571886 TNS2Q63HR2 1409 aa14.06□□□□□ -0.16
GTF3C1-213ENST00000571886 MEGF6O75095 1541 aa14.05□□□□□ -0.16
GTF3C1-213ENST00000571886 KAT6BQ8WYB5 2073 aa14.04□□□□□ -0.16
GTF3C1-213ENST00000571886 KCNQ2O43526 872 aa14.04□□□□□ -0.16
GTF3C1-213ENST00000571886 MORC1Q86VD1 984 aa14.04□□□□□ -0.16
GTF3C1-213ENST00000571886 KIF24Q5T7B8 1368 aa14.04□□□□□ -0.16
GTF3C1-213ENST00000571886 DDX54Q8TDD1 881 aaKnown RBP14.03□□□□□ -0.16
GTF3C1-213ENST00000571886 ACSBG1Q96GR2 724 aa14.03□□□□□ -0.16
GTF3C1-213ENST00000571886 SHANK3Q9BYB0 1731 aa14.03□□□□□ -0.16
GTF3C1-213ENST00000571886 BCL9O00512 1426 aa14.02□□□□□ -0.16
GTF3C1-213ENST00000571886 NSD2O96028 1365 aa14.02□□□□□ -0.17
GTF3C1-213ENST00000571886 CNGB1Q14028 1251 aaPredicted RBP14.02□□□□□ -0.17
GTF3C1-213ENST00000571886 EYA1Q99502 592 aa14.02□□□□□ -0.17
GTF3C1-213ENST00000571886 EIF4A2Q14240 407 aaKnown RBP14.01□□□□□ -0.17
GTF3C1-213ENST00000571886 CC2D1BQ5T0F9 858 aaKnown RBP14.01□□□□□ -0.17
GTF3C1-213ENST00000571886 BCL11BQ9C0K0 894 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms