RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 ARHGEF25Q86VW2 580 aa22.16■■□□□ 1.14
TSR1-202ENST00000571806 COL18A1P39060 1754 aa22.16■■□□□ 1.14
TSR1-202ENST00000571806 SBNO2Q9Y2G9 1366 aa22.15■■□□□ 1.14
TSR1-202ENST00000571806 AXIN2Q9Y2T1 843 aa22.14■■□□□ 1.13
TSR1-202ENST00000571806 KTN1Q86UP2 1357 aaKnown RBP22.13■■□□□ 1.13
TSR1-202ENST00000571806 PLSCR1O15162 318 aa22.13■■□□□ 1.13
TSR1-202ENST00000571806 NUP188Q5SRE5 1749 aa22.12■■□□□ 1.13
TSR1-202ENST00000571806 PEAK1Q9H792 1746 aa22.12■■□□□ 1.13
TSR1-202ENST00000571806 CARD10Q9BWT7 1032 aa22.12■■□□□ 1.13
TSR1-202ENST00000571806 LRRC37A3O60309 1634 aa22.12■■□□□ 1.13
TSR1-202ENST00000571806 ABCC6O95255 1503 aa22.11■■□□□ 1.13
TSR1-202ENST00000571806 RGPD3A6NKT7 1758 aaPredicted RBP22.11■■□□□ 1.13
TSR1-202ENST00000571806 RGPD4Q7Z3J3 1758 aa22.11■■□□□ 1.13
TSR1-202ENST00000571806 BCL9O00512 1426 aa22.11■■□□□ 1.13
TSR1-202ENST00000571806 CSB-PGBD3P0DP91 1061 aa22.1■■□□□ 1.13
TSR1-202ENST00000571806 BCL11BQ9C0K0 894 aaPredicted RBP22.1■■□□□ 1.13
TSR1-202ENST00000571806 CARD11Q9BXL7 1154 aa22.09■■□□□ 1.13
TSR1-202ENST00000571806 WNK3Q9BYP7 1800 aa22.08■■□□□ 1.13
TSR1-202ENST00000571806 CCDC7Q96M83 1385 aa22.08■■□□□ 1.12
TSR1-202ENST00000571806 SBF2Q86WG5 1849 aa22.08■■□□□ 1.12
TSR1-202ENST00000571806 MON2Q7Z3U7 1717 aa22.07■■□□□ 1.12
TSR1-202ENST00000571806 EXOC5O00471 708 aa22.07■■□□□ 1.12
TSR1-202ENST00000571806 NFAT5O94916 1531 aa22.06■■□□□ 1.12
TSR1-202ENST00000571806 SOX12O15370 315 aa22.06■■□□□ 1.12
TSR1-202ENST00000571806 PUS7Q96PZ0 661 aaKnown RBP22.06■■□□□ 1.12
TSR1-202ENST00000571806 USP31Q70CQ4 1352 aa22.06■■□□□ 1.12
TSR1-202ENST00000571806 RGPD5Q99666 1765 aa22.05■■□□□ 1.12
TSR1-202ENST00000571806 HDGFL2Q7Z4V5 671 aaPredicted RBP22.05■■□□□ 1.12
TSR1-202ENST00000571806 MARCH10Q8NA82 808 aaPredicted RBP22.05■■□□□ 1.12
TSR1-202ENST00000571806 SPON1Q9HCB6 807 aa22.05■■□□□ 1.12
TSR1-202ENST00000571806 SLC24A1O60721 1099 aa22.03■■□□□ 1.12
TSR1-202ENST00000571806 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.03■■□□□ 1.12
TSR1-202ENST00000571806 USP54Q70EL1 1684 aa22.03■■□□□ 1.12
TSR1-202ENST00000571806 TONSLQ96HA7 1378 aa22.02■■□□□ 1.12
TSR1-202ENST00000571806 TERF2IPQ9NYB0 399 aa22.02■■□□□ 1.12
TSR1-202ENST00000571806 KCNQ2O43526 872 aa22.01■■□□□ 1.11
TSR1-202ENST00000571806 TMC1Q8TDI8 760 aa22.01■■□□□ 1.11
TSR1-202ENST00000571806 PPP1R1BQ9UD71 204 aaPredicted RBP22■■□□□ 1.11
TSR1-202ENST00000571806 EDC4Q6P2E9 1401 aaKnown RBP21.99■■□□□ 1.11
TSR1-202ENST00000571806 CD163L1Q9NR16 1453 aa21.99■■□□□ 1.11
TSR1-202ENST00000571806 ERBB3P21860 1342 aa21.98■■□□□ 1.11
TSR1-202ENST00000571806 TNS2Q63HR2 1409 aa21.97■■□□□ 1.11
TSR1-202ENST00000571806 NME9Q86XW9 330 aa21.97■■□□□ 1.11
TSR1-202ENST00000571806 SLC12A5Q9H2X9 1139 aa21.97■■□□□ 1.11
TSR1-202ENST00000571806 NINLQ9Y2I6 1382 aa21.97■■□□□ 1.11
TSR1-202ENST00000571806 DCAF8L1A6NGE4 600 aa21.95■■□□□ 1.1
TSR1-202ENST00000571806 PROM2Q8N271 834 aa21.95■■□□□ 1.1
TSR1-202ENST00000571806 NLRP2Q9NX02 1062 aa21.95■■□□□ 1.1
TSR1-202ENST00000571806 LTN1O94822 1766 aa21.94■■□□□ 1.1
TSR1-202ENST00000571806 IL2RBP14784 551 aa21.94■■□□□ 1.1
TSR1-202ENST00000571806 PTF1AQ7RTS3 328 aa21.94■■□□□ 1.1
TSR1-202ENST00000571806 TXNRD1Q16881 649 aa21.93■■□□□ 1.1
TSR1-202ENST00000571806 A0A1W2PP64 1363 aa21.92■■□□□ 1.1
TSR1-202ENST00000571806 ANKRD24Q8TF21 1146 aa21.92■■□□□ 1.1
TSR1-202ENST00000571806 STK32BQ9NY57 414 aa21.92■■□□□ 1.1
TSR1-202ENST00000571806 ANO8Q9HCE9 1232 aaPredicted RBP21.91■■□□□ 1.1
TSR1-202ENST00000571806 CASZ1Q86V15 1759 aa21.89■■□□□ 1.1
TSR1-202ENST00000571806 NHSQ6T4R5 1651 aa21.89■■□□□ 1.1
TSR1-202ENST00000571806 SLC15A2Q16348 729 aa21.89■■□□□ 1.09
TSR1-202ENST00000571806 IP6K1Q92551 441 aa21.89■■□□□ 1.09
TSR1-202ENST00000571806 ST20-MTHFSA0A0A6YYL1 179 aa21.87■■□□□ 1.09
TSR1-202ENST00000571806 COG3Q96JB2 828 aa21.87■■□□□ 1.09
TSR1-202ENST00000571806 TESK2Q96S53 571 aa21.87■■□□□ 1.09
TSR1-202ENST00000571806 FAM208AQ9UK61 1670 aaKnown RBP21.86■■□□□ 1.09
TSR1-202ENST00000571806 ACSBG1Q96GR2 724 aa21.84■■□□□ 1.09
TSR1-202ENST00000571806 YY1P25490 414 aa21.83■■□□□ 1.09
TSR1-202ENST00000571806 ZBTB7AO95365 584 aa21.82■■□□□ 1.08
TSR1-202ENST00000571806 MTFR1LQ9H019 292 aa21.82■■□□□ 1.08
TSR1-202ENST00000571806 PTGER2P43116 358 aa21.81■■□□□ 1.08
TSR1-202ENST00000571806 PDGFDQ9GZP0 370 aaPredicted RBP21.81■■□□□ 1.08
TSR1-202ENST00000571806 ANKRD36BQ8N2N9 1353 aa21.81■■□□□ 1.08
TSR1-202ENST00000571806 BTAF1O14981 1849 aa21.79■■□□□ 1.08
TSR1-202ENST00000571806 HOXC9P31274 260 aa21.79■■□□□ 1.08
TSR1-202ENST00000571806 AMPHP49418 695 aa21.79■■□□□ 1.08
TSR1-202ENST00000571806 TMF1P82094 1093 aa21.79■■□□□ 1.08
TSR1-202ENST00000571806 MAP3K19Q56UN5 1328 aa21.79■■□□□ 1.08
TSR1-202ENST00000571806 CDCA8Q53HL2 280 aa21.78■■□□□ 1.08
TSR1-202ENST00000571806 SLC27A3Q5K4L6 730 aa21.78■■□□□ 1.08
TSR1-202ENST00000571806 ATF5Q9Y2D1 282 aaPredicted RBP21.78■■□□□ 1.08
TSR1-202ENST00000571806 DDX54Q8TDD1 881 aaKnown RBP21.77■■□□□ 1.08
TSR1-202ENST00000571806 LTV1Q96GA3 475 aaPredicted RBP21.77■■□□□ 1.08
TSR1-202ENST00000571806 RTL1A6NKG5 1358 aa21.76■■□□□ 1.07
TSR1-202ENST00000571806 PAPPAQ13219 1627 aa21.76■■□□□ 1.07
TSR1-202ENST00000571806 TRIM26Q12899 539 aaPredicted RBP21.75■■□□□ 1.07
TSR1-202ENST00000571806 MYOM1P52179 1685 aa21.75■■□□□ 1.07
TSR1-202ENST00000571806 KAT6BQ8WYB5 2073 aa21.74■■□□□ 1.07
TSR1-202ENST00000571806 CGNL1Q0VF96 1302 aa21.74■■□□□ 1.07
TSR1-202ENST00000571806 ZCRB1Q8TBF4 217 aaKnown RBP21.73■■□□□ 1.07
TSR1-202ENST00000571806 SGIP1Q9BQI5 828 aa21.73■■□□□ 1.07
TSR1-202ENST00000571806 USP47Q96K76 1375 aa21.73■■□□□ 1.07
TSR1-202ENST00000571806 FYB1O15117 783 aa21.72■■□□□ 1.07
TSR1-202ENST00000571806 SLC16A10Q8TF71 515 aa21.72■■□□□ 1.07
TSR1-202ENST00000571806 SYT17Q9BSW7 474 aa21.72■■□□□ 1.07
TSR1-202ENST00000571806 LRRC4BQ9NT99 713 aa21.72■■□□□ 1.07
TSR1-202ENST00000571806 SMG6Q86US8 1419 aaKnown RBP21.72■■□□□ 1.07
TSR1-202ENST00000571806 HMGB2P26583 209 aaKnown RBP21.71■■□□□ 1.07
TSR1-202ENST00000571806 FHDC1Q9C0D6 1143 aaPredicted RBP21.71■■□□□ 1.07
TSR1-202ENST00000571806 SYTL4Q96C24 671 aaPredicted RBP21.7■■□□□ 1.06
TSR1-202ENST00000571806 ARXQ96QS3 562 aa21.7■■□□□ 1.06
TSR1-202ENST00000571806 KIF24Q5T7B8 1368 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms