RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 GLI3P10071 1580 aa11.98□□□□□ -0.49
TRAPPC1-203ENST00000571739 SPATA31A1Q5TZJ5 1347 aa11.98□□□□□ -0.49
TRAPPC1-203ENST00000571739 SOCS7O14512 581 aa11.98□□□□□ -0.49
TRAPPC1-203ENST00000571739 ZEB1P37275 1124 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC1-203ENST00000571739 NRAPQ86VF7 1730 aa11.97□□□□□ -0.49
TRAPPC1-203ENST00000571739 CGNL1Q0VF96 1302 aa11.97□□□□□ -0.49
TRAPPC1-203ENST00000571739 MAP3K19Q56UN5 1328 aa11.97□□□□□ -0.49
TRAPPC1-203ENST00000571739 RRS1Q15050 365 aaKnown RBP11.97□□□□□ -0.49
TRAPPC1-203ENST00000571739 IP6K1Q92551 441 aa11.97□□□□□ -0.49
TRAPPC1-203ENST00000571739 CDK12Q9NYV4 1490 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC1-203ENST00000571739 RGS12O14924 1447 aa11.96□□□□□ -0.49
TRAPPC1-203ENST00000571739 FAM98CQ17RN3 349 aaKnown RBP11.96□□□□□ -0.49
TRAPPC1-203ENST00000571739 AMER1Q5JTC6 1135 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC1-203ENST00000571739 SEPT12Q8IYM1 358 aa11.96□□□□□ -0.49
TRAPPC1-203ENST00000571739 USP35Q9P2H5 1018 aa11.96□□□□□ -0.49
TRAPPC1-203ENST00000571739 COL5A2P05997 1499 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC1-203ENST00000571739 HOXC9P31274 260 aa11.95□□□□□ -0.5
TRAPPC1-203ENST00000571739 KNSTRNQ9Y448 316 aa11.95□□□□□ -0.5
TRAPPC1-203ENST00000571739 WDR17Q8IZU2 1322 aa11.94□□□□□ -0.5
TRAPPC1-203ENST00000571739 BARGINQ6ZT62 677 aa11.94□□□□□ -0.5
TRAPPC1-203ENST00000571739 TOM1L2Q6ZVM7 507 aa11.94□□□□□ -0.5
TRAPPC1-203ENST00000571739 RGPD5Q99666 1765 aa11.94□□□□□ -0.5
TRAPPC1-203ENST00000571739 AMPHP49418 695 aa11.93□□□□□ -0.5
TRAPPC1-203ENST00000571739 HSP90AB2PQ58FF8 381 aa11.93□□□□□ -0.5
TRAPPC1-203ENST00000571739 TCP11L2Q8N4U5 519 aa11.93□□□□□ -0.5
TRAPPC1-203ENST00000571739 ANKRD24Q8TF21 1146 aa11.93□□□□□ -0.5
TRAPPC1-203ENST00000571739 POLKQ9UBT6 870 aa11.93□□□□□ -0.5
TRAPPC1-203ENST00000571739 EMILIN1Q9Y6C2 1016 aa11.93□□□□□ -0.5
TRAPPC1-203ENST00000571739 CSB-PGBD3P0DP91 1061 aa11.92□□□□□ -0.5
TRAPPC1-203ENST00000571739 TNNT2P45379 298 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC1-203ENST00000571739 CARD10Q9BWT7 1032 aa11.92□□□□□ -0.5
TRAPPC1-203ENST00000571739 THRAP3Q9Y2W1 955 aaKnown RBP11.92□□□□□ -0.5
TRAPPC1-203ENST00000571739 CRB1P82279 1406 aa11.92□□□□□ -0.5
TRAPPC1-203ENST00000571739 ERBB3P21860 1342 aa11.91□□□□□ -0.5
TRAPPC1-203ENST00000571739 KIF20BQ96Q89 1820 aa11.91□□□□□ -0.5
TRAPPC1-203ENST00000571739 MORC1Q86VD1 984 aa11.91□□□□□ -0.5
TRAPPC1-203ENST00000571739 LTV1Q96GA3 475 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC1-203ENST00000571739 LTN1O94822 1766 aa11.91□□□□□ -0.5
TRAPPC1-203ENST00000571739 CC2D1BQ5T0F9 858 aaKnown RBP11.9□□□□□ -0.5
TRAPPC1-203ENST00000571739 KRT27Q7Z3Y8 459 aa11.9□□□□□ -0.5
TRAPPC1-203ENST00000571739 UPF1Q92900 1129 aaKnown RBP eCLIP11.9□□□□□ -0.5
TRAPPC1-203ENST00000571739 BLMP54132 1417 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC1-203ENST00000571739 A0A0G2JS52 829 aa11.89□□□□□ -0.51
TRAPPC1-203ENST00000571739 PPM1GO15355 546 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC1-203ENST00000571739 MYT1Q01538 1121 aa11.89□□□□□ -0.51
TRAPPC1-203ENST00000571739 FAM182BQ5T319 152 aa11.89□□□□□ -0.51
TRAPPC1-203ENST00000571739 NLRP2Q9NX02 1062 aa11.89□□□□□ -0.51
TRAPPC1-203ENST00000571739 NSD2O96028 1365 aa11.89□□□□□ -0.51
TRAPPC1-203ENST00000571739 ABCC6O95255 1503 aa11.88□□□□□ -0.51
TRAPPC1-203ENST00000571739 NBPF6Q5VWK0 638 aa11.88□□□□□ -0.51
TRAPPC1-203ENST00000571739 NBPF4Q96M43 638 aa11.88□□□□□ -0.51
TRAPPC1-203ENST00000571739 INSRP06213 1382 aa11.88□□□□□ -0.51
TRAPPC1-203ENST00000571739 MAP2P11137 1827 aaKnown RBP11.88□□□□□ -0.51
TRAPPC1-203ENST00000571739 BRWD3Q6RI45 1802 aa11.88□□□□□ -0.51
TRAPPC1-203ENST00000571739 PEAK1Q9H792 1746 aa11.87□□□□□ -0.51
TRAPPC1-203ENST00000571739 CNGB1Q14028 1251 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC1-203ENST00000571739 KIF24Q5T7B8 1368 aa11.87□□□□□ -0.51
TRAPPC1-203ENST00000571739 DDX10Q13206 875 aaKnown RBP11.86□□□□□ -0.51
TRAPPC1-203ENST00000571739 RTL1A6NKG5 1358 aa11.86□□□□□ -0.51
TRAPPC1-203ENST00000571739 FLT4P35916 1363 aa11.86□□□□□ -0.51
TRAPPC1-203ENST00000571739 NPC1L1Q9UHC9 1359 aa11.86□□□□□ -0.51
TRAPPC1-203ENST00000571739 THSD7AQ9UPZ6 1657 aa11.85□□□□□ -0.51
TRAPPC1-203ENST00000571739 CDCA7Q9BWT1 371 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC1-203ENST00000571739 DISP2A7MBM2 1401 aa11.85□□□□□ -0.51
TRAPPC1-203ENST00000571739 ANKRD26Q9UPS8 1709 aa11.84□□□□□ -0.51
TRAPPC1-203ENST00000571739 EXOC5O00471 708 aa11.84□□□□□ -0.51
TRAPPC1-203ENST00000571739 IL2RBP14784 551 aa11.84□□□□□ -0.51
TRAPPC1-203ENST00000571739 MTHFSP49914 203 aa11.84□□□□□ -0.51
TRAPPC1-203ENST00000571739 PDE3BQ13370 1112 aa11.84□□□□□ -0.51
TRAPPC1-203ENST00000571739 EIF4A2Q14240 407 aaKnown RBP11.84□□□□□ -0.51
TRAPPC1-203ENST00000571739 DDB1Q16531 1140 aa11.84□□□□□ -0.51
TRAPPC1-203ENST00000571739 USHBP1Q8N6Y0 703 aa11.84□□□□□ -0.51
TRAPPC1-203ENST00000571739 EYA1Q99502 592 aa11.84□□□□□ -0.51
TRAPPC1-203ENST00000571739 MARCH10Q8NA82 808 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC1-203ENST00000571739 RGPD2P0DJD1 1756 aa11.82□□□□□ -0.52
TRAPPC1-203ENST00000571739 SMG6Q86US8 1419 aaKnown RBP11.81□□□□□ -0.52
TRAPPC1-203ENST00000571739 FAM196AQ6ZSG2 479 aa11.81□□□□□ -0.52
TRAPPC1-203ENST00000571739 ZNF316A6NFI3 1004 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC1-203ENST00000571739 IL13P35225 146 aa11.8□□□□□ -0.52
TRAPPC1-203ENST00000571739 CCDC125Q86Z20 511 aa11.8□□□□□ -0.52
TRAPPC1-203ENST00000571739 PARP4Q9UKK3 1724 aaKnown RBP11.8□□□□□ -0.52
TRAPPC1-203ENST00000571739 PPP2R1AP30153 589 aa11.79□□□□□ -0.52
TRAPPC1-203ENST00000571739 PTF1AQ7RTS3 328 aa11.79□□□□□ -0.52
TRAPPC1-203ENST00000571739 FAM208AQ9UK61 1670 aaKnown RBP11.78□□□□□ -0.52
TRAPPC1-203ENST00000571739 TRIM37O94972 964 aa11.78□□□□□ -0.52
TRAPPC1-203ENST00000571739 DEFB132Q7Z7B7 95 aa11.78□□□□□ -0.52
TRAPPC1-203ENST00000571739 ZCRB1Q8TBF4 217 aaKnown RBP11.78□□□□□ -0.52
TRAPPC1-203ENST00000571739 NCAPD2Q15021 1401 aa11.77□□□□□ -0.52
TRAPPC1-203ENST00000571739 MEGF6O75095 1541 aa11.77□□□□□ -0.52
TRAPPC1-203ENST00000571739 TATP17735 454 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC1-203ENST00000571739 DDX54Q8TDD1 881 aaKnown RBP11.77□□□□□ -0.53
TRAPPC1-203ENST00000571739 RAPGEF4Q8WZA2 1011 aa11.77□□□□□ -0.53
TRAPPC1-203ENST00000571739 LRRC37A3O60309 1634 aa11.77□□□□□ -0.53
TRAPPC1-203ENST00000571739 IGSF1Q8N6C5 1336 aa11.77□□□□□ -0.53
TRAPPC1-203ENST00000571739 AEBP1Q8IUX7 1158 aa11.76□□□□□ -0.53
TRAPPC1-203ENST00000571739 WNK3Q9BYP7 1800 aa11.76□□□□□ -0.53
TRAPPC1-203ENST00000571739 CYP27B1O15528 508 aa11.75□□□□□ -0.53
TRAPPC1-203ENST00000571739 KCNQ2O43526 872 aa11.75□□□□□ -0.53
TRAPPC1-203ENST00000571739 DIAPH1O60610 1272 aaKnown RBP11.75□□□□□ -0.53
TRAPPC1-203ENST00000571739 SULT6B1Q6IMI4 303 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms