RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 PER1O15534 1290 aaPredicted RBP9.66□□□□□ -0.86
SMG6-209ENST00000571442 RBM6P78332 1123 aaKnown RBP9.66□□□□□ -0.86
SMG6-209ENST00000571442 RRS1Q15050 365 aaKnown RBP9.66□□□□□ -0.86
SMG6-209ENST00000571442 VPS72Q15906 364 aa9.66□□□□□ -0.86
SMG6-209ENST00000571442 LARP1Q6PKG0 1096 aaKnown RBP9.66□□□□□ -0.86
SMG6-209ENST00000571442 KCNH5Q8NCM2 988 aa9.66□□□□□ -0.86
SMG6-209ENST00000571442 COG3Q96JB2 828 aa9.66□□□□□ -0.86
SMG6-209ENST00000571442 GJD4Q96KN9 370 aaPredicted RBP9.66□□□□□ -0.86
SMG6-209ENST00000571442 STRN4Q9NRL3 753 aa9.66□□□□□ -0.86
SMG6-209ENST00000571442 MAP3K19Q56UN5 1328 aa9.65□□□□□ -0.86
SMG6-209ENST00000571442 RGPD2P0DJD1 1756 aa9.65□□□□□ -0.87
SMG6-209ENST00000571442 SPATA31A5Q5VU36 1347 aa9.64□□□□□ -0.87
SMG6-209ENST00000571442 SPATA31A7Q8IWB4 1347 aa9.64□□□□□ -0.87
SMG6-209ENST00000571442 MAP2P11137 1827 aaKnown RBP9.64□□□□□ -0.87
SMG6-209ENST00000571442 AMER1Q5JTC6 1135 aaPredicted RBP9.64□□□□□ -0.87
SMG6-209ENST00000571442 THSD7AQ9UPZ6 1657 aa9.64□□□□□ -0.87
SMG6-209ENST00000571442 CGNL1Q0VF96 1302 aa9.63□□□□□ -0.87
SMG6-209ENST00000571442 SPATA31A1Q5TZJ5 1347 aa9.63□□□□□ -0.87
SMG6-209ENST00000571442 ABCC6O95255 1503 aa9.63□□□□□ -0.87
SMG6-209ENST00000571442 ZEB1P37275 1124 aaPredicted RBP9.63□□□□□ -0.87
SMG6-209ENST00000571442 CCDC9Q9Y3X0 531 aaKnown RBP9.63□□□□□ -0.87
SMG6-209ENST00000571442 EMILIN1Q9Y6C2 1016 aa9.63□□□□□ -0.87
SMG6-209ENST00000571442 WNK3Q9BYP7 1800 aa9.63□□□□□ -0.87
SMG6-209ENST00000571442 HOXC9P31274 260 aa9.62□□□□□ -0.87
SMG6-209ENST00000571442 TNNT2P45379 298 aaPredicted RBP9.62□□□□□ -0.87
SMG6-209ENST00000571442 FAM98CQ17RN3 349 aaKnown RBP9.62□□□□□ -0.87
SMG6-209ENST00000571442 USP35Q9P2H5 1018 aa9.62□□□□□ -0.87
SMG6-209ENST00000571442 ONECUT3O60422 494 aaPredicted RBP9.61□□□□□ -0.87
SMG6-209ENST00000571442 EVA1CP58658 441 aa9.61□□□□□ -0.87
SMG6-209ENST00000571442 SEPT12Q8IYM1 358 aa9.61□□□□□ -0.87
SMG6-209ENST00000571442 IP6K1Q92551 441 aa9.61□□□□□ -0.87
SMG6-209ENST00000571442 CRB1P82279 1406 aa9.61□□□□□ -0.87
SMG6-209ENST00000571442 FAM208AQ9UK61 1670 aaKnown RBP9.61□□□□□ -0.87
SMG6-209ENST00000571442 ERBB3P21860 1342 aa9.6□□□□□ -0.87
SMG6-209ENST00000571442 WDR17Q8IZU2 1322 aa9.6□□□□□ -0.87
SMG6-209ENST00000571442 CNGB1Q14028 1251 aaPredicted RBP9.6□□□□□ -0.87
SMG6-209ENST00000571442 HSP90AB2PQ58FF8 381 aa9.6□□□□□ -0.87
SMG6-209ENST00000571442 CC2D1BQ5T0F9 858 aaKnown RBP9.6□□□□□ -0.87
SMG6-209ENST00000571442 ANKRD24Q8TF21 1146 aa9.6□□□□□ -0.87
SMG6-209ENST00000571442 LTV1Q96GA3 475 aaPredicted RBP9.6□□□□□ -0.87
SMG6-209ENST00000571442 POLKQ9UBT6 870 aa9.6□□□□□ -0.87
SMG6-209ENST00000571442 KNSTRNQ9Y448 316 aa9.6□□□□□ -0.87
SMG6-209ENST00000571442 EP400Q96L91 3159 aa9.59□□□□□ -0.87
SMG6-209ENST00000571442 DISP2A7MBM2 1401 aa9.59□□□□□ -0.87
SMG6-209ENST00000571442 BLMP54132 1417 aaPredicted RBP9.59□□□□□ -0.87
SMG6-209ENST00000571442 TOM1L2Q6ZVM7 507 aa9.59□□□□□ -0.87
SMG6-209ENST00000571442 LRRC37A3O60309 1634 aa9.59□□□□□ -0.87
SMG6-209ENST00000571442 NSD2O96028 1365 aa9.59□□□□□ -0.87
SMG6-209ENST00000571442 SMG6Q86US8 1419 aaKnown RBP9.58□□□□□ -0.88
SMG6-209ENST00000571442 CSB-PGBD3P0DP91 1061 aa9.58□□□□□ -0.88
SMG6-209ENST00000571442 AMPHP49418 695 aa9.58□□□□□ -0.88
SMG6-209ENST00000571442 FAM182BQ5T319 152 aa9.58□□□□□ -0.88
SMG6-209ENST00000571442 TCP11L2Q8N4U5 519 aa9.58□□□□□ -0.88
SMG6-209ENST00000571442 PARP4Q9UKK3 1724 aaKnown RBP9.58□□□□□ -0.88
SMG6-209ENST00000571442 RTL1A6NKG5 1358 aa9.58□□□□□ -0.88
SMG6-209ENST00000571442 DDX10Q13206 875 aaKnown RBP9.57□□□□□ -0.88
SMG6-209ENST00000571442 BARGINQ6ZT62 677 aa9.57□□□□□ -0.88
SMG6-209ENST00000571442 MORC1Q86VD1 984 aa9.57□□□□□ -0.88
SMG6-209ENST00000571442 CARD10Q9BWT7 1032 aa9.57□□□□□ -0.88
SMG6-209ENST00000571442 INSRP06213 1382 aa9.57□□□□□ -0.88
SMG6-209ENST00000571442 FLT4P35916 1363 aa9.57□□□□□ -0.88
SMG6-209ENST00000571442 NPC1L1Q9UHC9 1359 aa9.56□□□□□ -0.88
SMG6-209ENST00000571442 PPM1GO15355 546 aaPredicted RBP9.56□□□□□ -0.88
SMG6-209ENST00000571442 NBPF6Q5VWK0 638 aa9.56□□□□□ -0.88
SMG6-209ENST00000571442 USHBP1Q8N6Y0 703 aa9.56□□□□□ -0.88
SMG6-209ENST00000571442 NBPF4Q96M43 638 aa9.56□□□□□ -0.88
SMG6-209ENST00000571442 NLRP2Q9NX02 1062 aa9.56□□□□□ -0.88
SMG6-209ENST00000571442 SHANK3Q9BYB0 1731 aa9.56□□□□□ -0.88
SMG6-209ENST00000571442 KIF24Q5T7B8 1368 aa9.55□□□□□ -0.88
SMG6-209ENST00000571442 A0A0G2JS52 829 aa9.55□□□□□ -0.88
SMG6-209ENST00000571442 MYT1Q01538 1121 aa9.55□□□□□ -0.88
SMG6-209ENST00000571442 THRAP3Q9Y2W1 955 aaKnown RBP9.55□□□□□ -0.88
SMG6-209ENST00000571442 MEGF6O75095 1541 aa9.55□□□□□ -0.88
SMG6-209ENST00000571442 EIF4A2Q14240 407 aaKnown RBP9.54□□□□□ -0.88
SMG6-209ENST00000571442 KRT27Q7Z3Y8 459 aa9.54□□□□□ -0.88
SMG6-209ENST00000571442 NCAPD2Q15021 1401 aa9.54□□□□□ -0.88
SMG6-209ENST00000571442 RGPD1P0DJD0 1748 aa9.53□□□□□ -0.88
SMG6-209ENST00000571442 COL3A1P02461 1466 aaPredicted RBP9.53□□□□□ -0.88
SMG6-209ENST00000571442 MTHFSP49914 203 aa9.53□□□□□ -0.88
SMG6-209ENST00000571442 EYA1Q99502 592 aa9.53□□□□□ -0.88
SMG6-209ENST00000571442 TNS2Q63HR2 1409 aa9.52□□□□□ -0.89
SMG6-209ENST00000571442 SRCAPQ6ZRS2 3230 aa9.52□□□□□ -0.89
SMG6-209ENST00000571442 MARCH10Q8NA82 808 aaPredicted RBP9.52□□□□□ -0.89
SMG6-209ENST00000571442 SBF2Q86WG5 1849 aa9.52□□□□□ -0.89
SMG6-209ENST00000571442 TNS1Q9HBL0 1735 aaKnown RBP9.51□□□□□ -0.89
SMG6-209ENST00000571442 ZNF316A6NFI3 1004 aaPredicted RBP9.51□□□□□ -0.89
SMG6-209ENST00000571442 IL2RBP14784 551 aa9.51□□□□□ -0.89
SMG6-209ENST00000571442 PPP2R1AP30153 589 aa9.51□□□□□ -0.89
SMG6-209ENST00000571442 IL13P35225 146 aa9.51□□□□□ -0.89
SMG6-209ENST00000571442 PTF1AQ7RTS3 328 aa9.51□□□□□ -0.89
SMG6-209ENST00000571442 PARD3Q8TEW0 1356 aa9.5□□□□□ -0.89
SMG6-209ENST00000571442 DDB1Q16531 1140 aa9.5□□□□□ -0.89
SMG6-209ENST00000571442 AEBP1Q8IUX7 1158 aa9.5□□□□□ -0.89
SMG6-209ENST00000571442 IGSF1Q8N6C5 1336 aa9.5□□□□□ -0.89
SMG6-209ENST00000571442 OVOS2A0A0G2JMS6 1433 aa9.49□□□□□ -0.89
SMG6-209ENST00000571442 PKD1L3Q7Z443 1732 aa9.49□□□□□ -0.89
SMG6-209ENST00000571442 CCDC125Q86Z20 511 aa9.49□□□□□ -0.89
SMG6-209ENST00000571442 EXOC5O00471 708 aa9.48□□□□□ -0.89
SMG6-209ENST00000571442 PDE3BQ13370 1112 aa9.48□□□□□ -0.89
SMG6-209ENST00000571442 SF3B2Q13435 895 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms