RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 USTQ9Y2C2 406 aa10.39□□□□□ -0.75
TCF4-246ENST00000570287 POGZQ7Z3K3 1410 aa10.39□□□□□ -0.75
TCF4-246ENST00000570287 MLH3Q9UHC1 1453 aa10.39□□□□□ -0.75
TCF4-246ENST00000570287 EIF3AQ14152 1382 aaKnown RBP10.39□□□□□ -0.75
TCF4-246ENST00000570287 PATL2C9JE40 543 aaKnown RBP10.38□□□□□ -0.75
TCF4-246ENST00000570287 PDIA6Q15084 440 aa10.38□□□□□ -0.75
TCF4-246ENST00000570287 PRDM16Q9HAZ2 1276 aa10.38□□□□□ -0.75
TCF4-246ENST00000570287 MAP3K4Q9Y6R4 1608 aa10.38□□□□□ -0.75
TCF4-246ENST00000570287 PPRC1Q5VV67 1664 aaKnown RBP10.38□□□□□ -0.75
TCF4-246ENST00000570287 DRC1Q96MC2 740 aa10.38□□□□□ -0.75
TCF4-246ENST00000570287 PSMD1Q99460 953 aa10.38□□□□□ -0.75
TCF4-246ENST00000570287 IFT172Q9UG01 1749 aa10.37□□□□□ -0.75
TCF4-246ENST00000570287 SYNMO15061 1565 aa10.37□□□□□ -0.75
TCF4-246ENST00000570287 DNAJC14Q6Y2X3 702 aaPredicted RBP10.37□□□□□ -0.75
TCF4-246ENST00000570287 BCCIPQ9P287 314 aaKnown RBP eCLIP10.37□□□□□ -0.75
TCF4-246ENST00000570287 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.37□□□□□ -0.75
TCF4-246ENST00000570287 NEFMP07197 916 aa10.37□□□□□ -0.75
TCF4-246ENST00000570287 ANKRD62A6NC57 917 aa10.36□□□□□ -0.75
TCF4-246ENST00000570287 RFC5P40937 340 aa10.36□□□□□ -0.75
TCF4-246ENST00000570287 TAGLNQ01995 201 aaKnown RBP10.36□□□□□ -0.75
TCF4-246ENST00000570287 HECW2Q9P2P5 1572 aa10.36□□□□□ -0.75
TCF4-246ENST00000570287 SREK1Q8WXA9 508 aaKnown RBP10.36□□□□□ -0.75
TCF4-246ENST00000570287 UGGT1Q9NYU2 1555 aa10.36□□□□□ -0.75
TCF4-246ENST00000570287 CC2D1BQ5T0F9 858 aaKnown RBP10.36□□□□□ -0.75
TCF4-246ENST00000570287 BEGAINQ9BUH8 593 aa10.36□□□□□ -0.75
TCF4-246ENST00000570287 VRTNQ9H8Y1 702 aa10.36□□□□□ -0.75
TCF4-246ENST00000570287 ABCA6Q8N139 1617 aa10.35□□□□□ -0.75
TCF4-246ENST00000570287 PDE3BQ13370 1112 aa10.35□□□□□ -0.75
TCF4-246ENST00000570287 NRXN1Q9ULB1 1477 aa10.35□□□□□ -0.75
TCF4-246ENST00000570287 FRMPD1Q5SYB0 1578 aa10.35□□□□□ -0.75
TCF4-246ENST00000570287 MDM2Q00987 491 aaPredicted RBP10.35□□□□□ -0.75
TCF4-246ENST00000570287 HDGFL1Q5TGJ6 251 aa10.34□□□□□ -0.75
TCF4-246ENST00000570287 GIPC2Q8TF65 315 aa10.34□□□□□ -0.75
TCF4-246ENST00000570287 NEO1Q92859 1461 aa10.34□□□□□ -0.75
TCF4-246ENST00000570287 ADGRB3O60242 1522 aa10.34□□□□□ -0.75
TCF4-246ENST00000570287 BLMP54132 1417 aaPredicted RBP10.34□□□□□ -0.75
TCF4-246ENST00000570287 FOSBP53539 338 aa10.34□□□□□ -0.75
TCF4-246ENST00000570287 NLRP6P59044 892 aa10.34□□□□□ -0.75
TCF4-246ENST00000570287 MROH2AA6NES4 1674 aa10.34□□□□□ -0.75
TCF4-246ENST00000570287 KNSTRNQ9Y448 316 aa10.34□□□□□ -0.75
TCF4-246ENST00000570287 KDM5AP29375 1690 aaKnown RBP10.33□□□□□ -0.75
TCF4-246ENST00000570287 GLIPR1L2Q4G1C9 344 aa10.33□□□□□ -0.76
TCF4-246ENST00000570287 TSPYL2Q9H2G4 693 aaPredicted RBP10.33□□□□□ -0.76
TCF4-246ENST00000570287 MYOM1P52179 1685 aa10.33□□□□□ -0.76
TCF4-246ENST00000570287 PRIM1P49642 420 aaKnown RBP10.33□□□□□ -0.76
TCF4-246ENST00000570287 NOL8Q76FK4 1167 aaKnown RBP10.33□□□□□ -0.76
TCF4-246ENST00000570287 FAM43AQ8N2R8 423 aa10.33□□□□□ -0.76
TCF4-246ENST00000570287 NPC1L1Q9UHC9 1359 aa10.33□□□□□ -0.76
TCF4-246ENST00000570287 ADGRF5Q8IZF2 1346 aa10.33□□□□□ -0.76
TCF4-246ENST00000570287 MARCH6O60337 910 aa10.32□□□□□ -0.76
TCF4-246ENST00000570287 MYSM1Q5VVJ2 828 aa10.32□□□□□ -0.76
TCF4-246ENST00000570287 PPP1R15BQ5SWA1 713 aa10.32□□□□□ -0.76
TCF4-246ENST00000570287 NPATQ14207 1427 aa10.32□□□□□ -0.76
TCF4-246ENST00000570287 SETBP1Q9Y6X0 1596 aa10.32□□□□□ -0.76
TCF4-246ENST00000570287 ASXL1Q8IXJ9 1541 aa10.32□□□□□ -0.76
TCF4-246ENST00000570287 FARP1Q9Y4F1 1045 aaPredicted RBP10.32□□□□□ -0.76
TCF4-246ENST00000570287 MYO3AQ8NEV4 1616 aa10.32□□□□□ -0.76
TCF4-246ENST00000570287 ANKRD13AQ8IZ07 590 aa10.31□□□□□ -0.76
TCF4-246ENST00000570287 TCERG1O14776 1098 aaKnown RBP10.31□□□□□ -0.76
TCF4-246ENST00000570287 ABCC3O15438 1527 aa10.31□□□□□ -0.76
TCF4-246ENST00000570287 BCL2L13Q9BXK5 485 aa10.3□□□□□ -0.76
TCF4-246ENST00000570287 SBNO2Q9Y2G9 1366 aa10.3□□□□□ -0.76
TCF4-246ENST00000570287 NAP1L5Q96NT1 182 aaPredicted RBP10.3□□□□□ -0.76
TCF4-246ENST00000570287 PPLO60437 1756 aa10.3□□□□□ -0.76
TCF4-246ENST00000570287 SENP3-EIF4A1A0A087X0R7 540 aa10.3□□□□□ -0.76
TCF4-246ENST00000570287 BACH2Q9BYV9 841 aa10.3□□□□□ -0.76
TCF4-246ENST00000570287 ERVK-7P63135 1459 aa10.3□□□□□ -0.76
TCF4-246ENST00000570287 NOS1P29475 1434 aa10.29□□□□□ -0.76
TCF4-246ENST00000570287 PPP2R1AP30153 589 aa10.29□□□□□ -0.76
TCF4-246ENST00000570287 HIC1Q14526 733 aa10.29□□□□□ -0.76
TCF4-246ENST00000570287 GGT6Q6P531 493 aa10.29□□□□□ -0.76
TCF4-246ENST00000570287 PIK3C2GO75747 1445 aa10.29□□□□□ -0.76
TCF4-246ENST00000570287 RPGRIP1LQ68CZ1 1315 aa10.29□□□□□ -0.76
TCF4-246ENST00000570287 SSTR3P32745 418 aaPredicted RBP10.29□□□□□ -0.76
TCF4-246ENST00000570287 SCNN1AP37088 669 aa10.29□□□□□ -0.76
TCF4-246ENST00000570287 CAMSAP1Q5T5Y3 1602 aa10.29□□□□□ -0.76
TCF4-246ENST00000570287 OSBPP22059 807 aa10.28□□□□□ -0.76
TCF4-246ENST00000570287 LAS1LQ9Y4W2 734 aaKnown RBP10.28□□□□□ -0.76
TCF4-246ENST00000570287 DIP2CQ9Y2E4 1556 aa10.28□□□□□ -0.76
TCF4-246ENST00000570287 RRP1P56182 461 aaKnown RBP10.28□□□□□ -0.76
TCF4-246ENST00000570287 RCAN3Q9UKA8 241 aa10.28□□□□□ -0.76
TCF4-246ENST00000570287 FAM161AQ3B820 660 aa10.27□□□□□ -0.77
TCF4-246ENST00000570287 TICAM2Q86XR7 235 aa10.27□□□□□ -0.77
TCF4-246ENST00000570287 LMOD1P29536 600 aaPredicted RBP10.27□□□□□ -0.77
TCF4-246ENST00000570287 PPP1R12CQ9BZL4 782 aa10.27□□□□□ -0.77
TCF4-246ENST00000570287 C14orf93Q9H972 538 aaKnown RBP10.27□□□□□ -0.77
TCF4-246ENST00000570287 RICTORQ6R327 1708 aa10.27□□□□□ -0.77
TCF4-246ENST00000570287 PIK3C2BO00750 1634 aa10.26□□□□□ -0.77
TCF4-246ENST00000570287 ZC3H13Q5T200 1668 aaKnown RBP10.26□□□□□ -0.77
TCF4-246ENST00000570287 TMUB1Q9BVT8 246 aa10.26□□□□□ -0.77
TCF4-246ENST00000570287 CFAP65Q6ZU64 1925 aaKnown RBP10.26□□□□□ -0.77
TCF4-246ENST00000570287 ARHGAP31Q2M1Z3 1444 aa10.26□□□□□ -0.77
TCF4-246ENST00000570287 RAPGEF3O95398 923 aa10.26□□□□□ -0.77
TCF4-246ENST00000570287 WDR43Q15061 677 aaKnown RBP eCLIP10.26□□□□□ -0.77
TCF4-246ENST00000570287 ADAMTS8Q9UP79 889 aa10.26□□□□□ -0.77
TCF4-246ENST00000570287 CENPJQ9HC77 1338 aaPredicted RBP10.26□□□□□ -0.77
TCF4-246ENST00000570287 ADGRB1O14514 1584 aa10.25□□□□□ -0.77
TCF4-246ENST00000570287 PALM3A6NDB9 673 aaPredicted RBP10.25□□□□□ -0.77
TCF4-246ENST00000570287 NAALADL2Q58DX5 795 aa10.25□□□□□ -0.77
TCF4-246ENST00000570287 CC2D2BQ6DHV5 1058 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms