RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 NRAPQ86VF7 1730 aa13.28□□□□□ -0.28
HCCAT5-201ENST00000569990 RXRBP28702 533 aa13.28□□□□□ -0.28
HCCAT5-201ENST00000569990 RBM6P78332 1123 aaKnown RBP13.28□□□□□ -0.28
HCCAT5-201ENST00000569990 KIF7Q2M1P5 1343 aa13.28□□□□□ -0.28
HCCAT5-201ENST00000569990 NSD3Q9BZ95 1437 aa13.27□□□□□ -0.29
HCCAT5-201ENST00000569990 LMO7Q8WWI1 1683 aa13.27□□□□□ -0.29
HCCAT5-201ENST00000569990 FYB1O15117 783 aa13.26□□□□□ -0.29
HCCAT5-201ENST00000569990 SOX12O15370 315 aa13.26□□□□□ -0.29
HCCAT5-201ENST00000569990 VPS72Q15906 364 aa13.26□□□□□ -0.29
HCCAT5-201ENST00000569990 ARHGEF25Q86VW2 580 aa13.26□□□□□ -0.29
HCCAT5-201ENST00000569990 GJD4Q96KN9 370 aaPredicted RBP13.26□□□□□ -0.29
HCCAT5-201ENST00000569990 CDK12Q9NYV4 1490 aaPredicted RBP13.26□□□□□ -0.29
HCCAT5-201ENST00000569990 CAMTA1Q9Y6Y1 1673 aa13.26□□□□□ -0.29
HCCAT5-201ENST00000569990 AATKQ6ZMQ8 1374 aa13.25□□□□□ -0.29
HCCAT5-201ENST00000569990 COG3Q96JB2 828 aa13.25□□□□□ -0.29
HCCAT5-201ENST00000569990 GLI3P10071 1580 aa13.24□□□□□ -0.29
HCCAT5-201ENST00000569990 CCDC7Q96M83 1385 aa13.24□□□□□ -0.29
HCCAT5-201ENST00000569990 GGNBP2Q9H3C7 697 aa13.24□□□□□ -0.29
HCCAT5-201ENST00000569990 PANK3Q9H999 370 aa13.24□□□□□ -0.29
HCCAT5-201ENST00000569990 RGS12O14924 1447 aa13.23□□□□□ -0.29
HCCAT5-201ENST00000569990 KIF20BQ96Q89 1820 aa13.23□□□□□ -0.29
HCCAT5-201ENST00000569990 COL18A1P39060 1754 aa13.23□□□□□ -0.29
HCCAT5-201ENST00000569990 WASHC2AQ641Q2 1341 aa13.23□□□□□ -0.29
HCCAT5-201ENST00000569990 ZBTB7CA1YPR0 619 aa13.23□□□□□ -0.29
HCCAT5-201ENST00000569990 COL5A2P05997 1499 aaPredicted RBP13.23□□□□□ -0.29
HCCAT5-201ENST00000569990 CGNL1Q0VF96 1302 aa13.22□□□□□ -0.29
HCCAT5-201ENST00000569990 STRN4Q9NRL3 753 aa13.22□□□□□ -0.29
HCCAT5-201ENST00000569990 CCDC9Q9Y3X0 531 aaKnown RBP13.22□□□□□ -0.29
HCCAT5-201ENST00000569990 ABCC6O95255 1503 aa13.22□□□□□ -0.29
HCCAT5-201ENST00000569990 SPATA31A5Q5VU36 1347 aa13.21□□□□□ -0.29
HCCAT5-201ENST00000569990 SPATA31A7Q8IWB4 1347 aa13.21□□□□□ -0.29
HCCAT5-201ENST00000569990 ZEB1P37275 1124 aaPredicted RBP13.21□□□□□ -0.29
HCCAT5-201ENST00000569990 AXIN2Q9Y2T1 843 aa13.21□□□□□ -0.29
HCCAT5-201ENST00000569990 EVA1CP58658 441 aa13.2□□□□□ -0.3
HCCAT5-201ENST00000569990 LARP1Q6PKG0 1096 aaKnown RBP13.2□□□□□ -0.3
HCCAT5-201ENST00000569990 SPATA31A1Q5TZJ5 1347 aa13.19□□□□□ -0.3
HCCAT5-201ENST00000569990 SOCS7O14512 581 aa13.19□□□□□ -0.3
HCCAT5-201ENST00000569990 FBLN1P23142 703 aa13.19□□□□□ -0.3
HCCAT5-201ENST00000569990 LTN1O94822 1766 aa13.19□□□□□ -0.3
HCCAT5-201ENST00000569990 MAP3K19Q56UN5 1328 aa13.18□□□□□ -0.3
HCCAT5-201ENST00000569990 ONECUT3O60422 494 aaPredicted RBP13.18□□□□□ -0.3
HCCAT5-201ENST00000569990 WDR17Q8IZU2 1322 aa13.17□□□□□ -0.3
HCCAT5-201ENST00000569990 CRB1P82279 1406 aa13.17□□□□□ -0.3
HCCAT5-201ENST00000569990 FAM98CQ17RN3 349 aaKnown RBP13.17□□□□□ -0.3
HCCAT5-201ENST00000569990 FOXD4L1Q9NU39 408 aa13.17□□□□□ -0.3
HCCAT5-201ENST00000569990 NSD2O96028 1365 aa13.17□□□□□ -0.3
HCCAT5-201ENST00000569990 BLMP54132 1417 aaPredicted RBP13.16□□□□□ -0.3
HCCAT5-201ENST00000569990 PER1O15534 1290 aaPredicted RBP13.16□□□□□ -0.3
HCCAT5-201ENST00000569990 RRS1Q15050 365 aaKnown RBP13.16□□□□□ -0.3
HCCAT5-201ENST00000569990 IP6K1Q92551 441 aa13.16□□□□□ -0.3
HCCAT5-201ENST00000569990 KNSTRNQ9Y448 316 aa13.16□□□□□ -0.3
HCCAT5-201ENST00000569990 RGPD5Q99666 1765 aa13.16□□□□□ -0.3
HCCAT5-201ENST00000569990 ANKRD26Q9UPS8 1709 aa13.16□□□□□ -0.3
HCCAT5-201ENST00000569990 ERBB3P21860 1342 aa13.15□□□□□ -0.3
HCCAT5-201ENST00000569990 AMER1Q5JTC6 1135 aaPredicted RBP13.15□□□□□ -0.3
HCCAT5-201ENST00000569990 SEPT12Q8IYM1 358 aa13.15□□□□□ -0.3
HCCAT5-201ENST00000569990 USP35Q9P2H5 1018 aa13.15□□□□□ -0.3
HCCAT5-201ENST00000569990 RTL1A6NKG5 1358 aa13.15□□□□□ -0.3
HCCAT5-201ENST00000569990 THSD7AQ9UPZ6 1657 aa13.15□□□□□ -0.31
HCCAT5-201ENST00000569990 CSB-PGBD3P0DP91 1061 aa13.14□□□□□ -0.31
HCCAT5-201ENST00000569990 HOXC9P31274 260 aa13.14□□□□□ -0.31
HCCAT5-201ENST00000569990 AMPHP49418 695 aa13.14□□□□□ -0.31
HCCAT5-201ENST00000569990 BARGINQ6ZT62 677 aa13.14□□□□□ -0.31
HCCAT5-201ENST00000569990 TOM1L2Q6ZVM7 507 aa13.14□□□□□ -0.31
HCCAT5-201ENST00000569990 TCP11L2Q8N4U5 519 aa13.14□□□□□ -0.31
HCCAT5-201ENST00000569990 THRAP3Q9Y2W1 955 aaKnown RBP13.14□□□□□ -0.31
HCCAT5-201ENST00000569990 ZBTB12Q9Y330 459 aaPredicted RBP13.14□□□□□ -0.31
HCCAT5-201ENST00000569990 KIF24Q5T7B8 1368 aa13.13□□□□□ -0.31
HCCAT5-201ENST00000569990 ANKRD24Q8TF21 1146 aa13.13□□□□□ -0.31
HCCAT5-201ENST00000569990 CARD10Q9BWT7 1032 aa13.13□□□□□ -0.31
HCCAT5-201ENST00000569990 ATF5Q9Y2D1 282 aaPredicted RBP13.13□□□□□ -0.31
HCCAT5-201ENST00000569990 PEAK1Q9H792 1746 aa13.13□□□□□ -0.31
HCCAT5-201ENST00000569990 A0A0G2JS52 829 aa13.12□□□□□ -0.31
HCCAT5-201ENST00000569990 MYT1Q01538 1121 aa13.12□□□□□ -0.31
HCCAT5-201ENST00000569990 EMILIN1Q9Y6C2 1016 aa13.12□□□□□ -0.31
HCCAT5-201ENST00000569990 FLT4P35916 1363 aa13.11□□□□□ -0.31
HCCAT5-201ENST00000569990 TNNT2P45379 298 aaPredicted RBP13.11□□□□□ -0.31
HCCAT5-201ENST00000569990 MORC1Q86VD1 984 aa13.11□□□□□ -0.31
HCCAT5-201ENST00000569990 BRWD3Q6RI45 1802 aa13.11□□□□□ -0.31
HCCAT5-201ENST00000569990 INSRP06213 1382 aa13.1□□□□□ -0.31
HCCAT5-201ENST00000569990 NPC1L1Q9UHC9 1359 aa13.1□□□□□ -0.31
HCCAT5-201ENST00000569990 HSP90AB2PQ58FF8 381 aa13.1□□□□□ -0.31
HCCAT5-201ENST00000569990 KRT27Q7Z3Y8 459 aa13.1□□□□□ -0.31
HCCAT5-201ENST00000569990 AKT1S1Q96B36 256 aa13.1□□□□□ -0.31
HCCAT5-201ENST00000569990 LTV1Q96GA3 475 aaPredicted RBP13.1□□□□□ -0.31
HCCAT5-201ENST00000569990 POLKQ9UBT6 870 aa13.1□□□□□ -0.31
HCCAT5-201ENST00000569990 FAM208AQ9UK61 1670 aaKnown RBP13.09□□□□□ -0.31
HCCAT5-201ENST00000569990 DISP2A7MBM2 1401 aa13.09□□□□□ -0.31
HCCAT5-201ENST00000569990 NLRP2Q9NX02 1062 aa13.09□□□□□ -0.31
HCCAT5-201ENST00000569990 PARP4Q9UKK3 1724 aaKnown RBP13.08□□□□□ -0.32
HCCAT5-201ENST00000569990 SMG6Q86US8 1419 aaKnown RBP13.08□□□□□ -0.32
HCCAT5-201ENST00000569990 PPM1GO15355 546 aaPredicted RBP13.08□□□□□ -0.32
HCCAT5-201ENST00000569990 UPF1Q92900 1129 aaKnown RBP eCLIP13.08□□□□□ -0.32
HCCAT5-201ENST00000569990 EP400Q96L91 3159 aa13.08□□□□□ -0.32
HCCAT5-201ENST00000569990 WNK3Q9BYP7 1800 aa13.08□□□□□ -0.32
HCCAT5-201ENST00000569990 MAP2P11137 1827 aaKnown RBP13.07□□□□□ -0.32
HCCAT5-201ENST00000569990 CC2D1BQ5T0F9 858 aaKnown RBP13.07□□□□□ -0.32
HCCAT5-201ENST00000569990 CDCA7Q9BWT1 371 aaPredicted RBP13.07□□□□□ -0.32
HCCAT5-201ENST00000569990 LRRC37A3O60309 1634 aa13.06□□□□□ -0.32
HCCAT5-201ENST00000569990 NBPF6Q5VWK0 638 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms