RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 TRAK2O60296 914 aa6.91□□□□□ -1.3
UBR1-211ENST00000569971 LILRB3O75022 631 aa6.91□□□□□ -1.3
UBR1-211ENST00000569971 ARID5BQ14865 1188 aa6.91□□□□□ -1.3
UBR1-211ENST00000569971 TSEN34Q9BSV6 310 aaKnown RBP6.91□□□□□ -1.3
UBR1-211ENST00000569971 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.91□□□□□ -1.3
UBR1-211ENST00000569971 EMILIN1Q9Y6C2 1016 aa6.91□□□□□ -1.3
UBR1-211ENST00000569971 SH3BP5LQ7L8J4 393 aa6.9□□□□□ -1.3
UBR1-211ENST00000569971 ZFAND3Q9H8U3 227 aa6.9□□□□□ -1.3
UBR1-211ENST00000569971 CDV3Q9UKY7 258 aaKnown RBP6.9□□□□□ -1.3
UBR1-211ENST00000569971 SOS2Q07890 1332 aaPredicted RBP6.9□□□□□ -1.3
UBR1-211ENST00000569971 PER1O15534 1290 aaPredicted RBP6.89□□□□□ -1.31
UBR1-211ENST00000569971 CLK2P49760 499 aaKnown RBP6.89□□□□□ -1.31
UBR1-211ENST00000569971 NUTM2BA6NNL0 878 aaPredicted RBP6.88□□□□□ -1.31
UBR1-211ENST00000569971 NUTM2EB1AL46 878 aaPredicted RBP6.88□□□□□ -1.31
UBR1-211ENST00000569971 PPFIA3O75145 1194 aa6.88□□□□□ -1.31
UBR1-211ENST00000569971 BMP2P12643 396 aa6.88□□□□□ -1.31
UBR1-211ENST00000569971 FSHRP23945 695 aa6.88□□□□□ -1.31
UBR1-211ENST00000569971 NUTM2DQ5VT03 806 aaPredicted RBP6.88□□□□□ -1.31
UBR1-211ENST00000569971 FBXO31Q5XUX0 539 aaPredicted RBP6.88□□□□□ -1.31
UBR1-211ENST00000569971 NUTM2AQ8IVF1 878 aaPredicted RBP6.88□□□□□ -1.31
UBR1-211ENST00000569971 CCDC116Q8IYX3 515 aa6.88□□□□□ -1.31
UBR1-211ENST00000569971 CABLES1Q8TDN4 633 aa6.88□□□□□ -1.31
UBR1-211ENST00000569971 POM121Q96HA1 1249 aa6.88□□□□□ -1.31
UBR1-211ENST00000569971 ZC3H4Q9UPT8 1303 aaKnown RBP6.87□□□□□ -1.31
UBR1-211ENST00000569971 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.87□□□□□ -1.319e-6■■■■□ 24.9
UBR1-211ENST00000569971 VASH1Q7L8A9 365 aaPredicted RBP6.87□□□□□ -1.31
UBR1-211ENST00000569971 LIMD1Q9UGP4 676 aa6.87□□□□□ -1.31
UBR1-211ENST00000569971 RFC5P40937 340 aa6.86□□□□□ -1.31
UBR1-211ENST00000569971 KCNMA1Q12791 1236 aa6.86□□□□□ -1.31
UBR1-211ENST00000569971 QPCTQ16769 361 aa6.86□□□□□ -1.31
UBR1-211ENST00000569971 C6orf118Q5T5N4 469 aa6.86□□□□□ -1.31
UBR1-211ENST00000569971 SNRKQ9NRH2 765 aa6.86□□□□□ -1.31
UBR1-211ENST00000569971 ZNF777Q9ULD5 760 aaPredicted RBP6.86□□□□□ -1.31
UBR1-211ENST00000569971 SOBPA7XYQ1 873 aa6.85□□□□□ -1.31
UBR1-211ENST00000569971 RNF225M0QZC1 329 aaPredicted RBP6.85□□□□□ -1.31
UBR1-211ENST00000569971 RAD21O60216 631 aa6.85□□□□□ -1.31
UBR1-211ENST00000569971 Q6ZVU0 165 aa6.85□□□□□ -1.31
UBR1-211ENST00000569971 PGPEP1Q9NXJ5 209 aa6.85□□□□□ -1.31
UBR1-211ENST00000569971 DNMT3LQ9UJW3 386 aa6.85□□□□□ -1.31
UBR1-211ENST00000569971 DHX9Q08211 1270 aaKnown RBP6.84□□□□□ -1.31
UBR1-211ENST00000569971 CSPP1Q1MSJ5 1256 aa6.84□□□□□ -1.31
UBR1-211ENST00000569971 PDXDC2PQ6P474 469 aa6.84□□□□□ -1.31
UBR1-211ENST00000569971 PROSER2Q86WR7 435 aaPredicted RBP6.84□□□□□ -1.31
UBR1-211ENST00000569971 NANOS1Q8WY41 292 aaKnown RBP6.84□□□□□ -1.31
UBR1-211ENST00000569971 TSC1Q92574 1164 aa6.84□□□□□ -1.31
UBR1-211ENST00000569971 TTLL8A6PVC2 850 aa6.83□□□□□ -1.32
UBR1-211ENST00000569971 ERFEQ4G0M1 354 aa6.83□□□□□ -1.32
UBR1-211ENST00000569971 TMEM259Q4ZIN3 620 aa6.83□□□□□ -1.32
UBR1-211ENST00000569971 PPP2R2DQ66LE6 453 aa6.83□□□□□ -1.32
UBR1-211ENST00000569971 FNBP4Q8N3X1 1017 aaPredicted RBP6.83□□□□□ -1.32
UBR1-211ENST00000569971 CCDC82Q8N4S0 544 aa6.83□□□□□ -1.32
UBR1-211ENST00000569971 BANK1Q8NDB2 785 aa6.83□□□□□ -1.32
UBR1-211ENST00000569971 MAGEB6P1A0A0J9YX57 407 aa6.82□□□□□ -1.32
UBR1-211ENST00000569971 SPINT1O43278 529 aa6.82□□□□□ -1.32
UBR1-211ENST00000569971 COG6Q9Y2V7 657 aa6.82□□□□□ -1.32
UBR1-211ENST00000569971 GPSM3Q9Y4H4 160 aa6.82□□□□□ -1.32
UBR1-211ENST00000569971 SLC10A4Q96EP9 437 aa6.81□□□□□ -1.32
UBR1-211ENST00000569971 PTSQ03393 145 aa6.8□□□□□ -1.32
UBR1-211ENST00000569971 RTL5Q5HYW3 569 aaPredicted RBP6.8□□□□□ -1.32
UBR1-211ENST00000569971 PPP1R26Q5T8A7 1209 aaPredicted RBP6.8□□□□□ -1.32
UBR1-211ENST00000569971 TRIM52Q96A61 297 aa6.8□□□□□ -1.32
UBR1-211ENST00000569971 ARHGAP9Q9BRR9 750 aa6.8□□□□□ -1.32
UBR1-211ENST00000569971 FKBPLQ9UIM3 349 aa6.8□□□□□ -1.32
UBR1-211ENST00000569971 LOC100996750A0A140TA64 210 aa6.79□□□□□ -1.32
UBR1-211ENST00000569971 KRTAP4-6Q9BYQ5 205 aa6.79□□□□□ -1.32
UBR1-211ENST00000569971 TRIM26Q12899 539 aaPredicted RBP6.78□□□□□ -1.32
UBR1-211ENST00000569971 NBPF20Q3BBV1 942 aa6.78□□□□□ -1.32
UBR1-211ENST00000569971 MTMR14Q8NCE2 650 aa6.78□□□□□ -1.32
UBR1-211ENST00000569971 PNMA1Q8ND90 353 aa6.78□□□□□ -1.32
UBR1-211ENST00000569971 KCTD15Q96SI1 283 aaPredicted RBP6.78□□□□□ -1.32
UBR1-211ENST00000569971 CARD14Q9BXL6 1004 aa6.78□□□□□ -1.32
UBR1-211ENST00000569971 PODXL2Q9NZ53 605 aa6.78□□□□□ -1.32
UBR1-211ENST00000569971 SLC35F4A4IF30 521 aa6.77□□□□□ -1.33
UBR1-211ENST00000569971 AP1G2O75843 785 aa6.77□□□□□ -1.33
UBR1-211ENST00000569971 SLURP2P0DP57 97 aa6.77□□□□□ -1.33
UBR1-211ENST00000569971 GSK3AP49840 483 aa6.77□□□□□ -1.33
UBR1-211ENST00000569971 KRT76Q01546 638 aa6.77□□□□□ -1.33
UBR1-211ENST00000569971 CCDC155Q8N6L0 562 aa6.77□□□□□ -1.33
UBR1-211ENST00000569971 GDPD2Q9HCC8 539 aa6.77□□□□□ -1.33
UBR1-211ENST00000569971 ZNF330Q9Y3S2 320 aaPredicted RBP6.77□□□□□ -1.33
UBR1-211ENST00000569971 PTK2Q05397 1052 aa6.76□□□□□ -1.33
UBR1-211ENST00000569971 ZBTB33Q86T24 672 aa6.76□□□□□ -1.33
UBR1-211ENST00000569971 ITGA6P23229 1130 aa6.75□□□□□ -1.33
UBR1-211ENST00000569971 CTDSPL2Q05D32 466 aa6.75□□□□□ -1.33
UBR1-211ENST00000569971 TMEM151AQ8N4L1 468 aa6.75□□□□□ -1.33
UBR1-211ENST00000569971 CCDC97Q96F63 343 aaPredicted RBP6.75□□□□□ -1.33
UBR1-211ENST00000569971 COL25A1Q9BXS0 654 aaPredicted RBP6.75□□□□□ -1.33
UBR1-211ENST00000569971 SERPINA10Q9UK55 444 aa6.75□□□□□ -1.33
UBR1-211ENST00000569971 INTS6LQ5JSJ4 861 aaKnown RBP6.74□□□□□ -1.33
UBR1-211ENST00000569971 GPR161Q8N6U8 529 aaKnown RBP6.74□□□□□ -1.33
UBR1-211ENST00000569971 CNTNAP3BQ96NU0 1288 aa6.74□□□□□ -1.33
UBR1-211ENST00000569971 CNTNAP3Q9BZ76 1288 aa6.74□□□□□ -1.33
UBR1-211ENST00000569971 ADAMTS8Q9UP79 889 aa6.74□□□□□ -1.33
UBR1-211ENST00000569971 ABL2P42684 1182 aa6.73□□□□□ -1.33
UBR1-211ENST00000569971 RASSF7Q02833 373 aa6.73□□□□□ -1.33
UBR1-211ENST00000569971 CBLBQ13191 982 aa6.73□□□□□ -1.33
UBR1-211ENST00000569971 SV2AQ7L0J3 742 aa6.73□□□□□ -1.33
UBR1-211ENST00000569971 TBC1D2BQ9UPU7 963 aa6.73□□□□□ -1.33
UBR1-211ENST00000569971 GDF11O95390 407 aa6.72□□□□□ -1.33
UBR1-211ENST00000569971 PDIA4P13667 645 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms