RNA–Protein interactions for RNA: ENST00000569784.1

SCAPER-223, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 580 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-223	ENST00000569784	ROCK2	O75116	1388 aa	Known RBP	12.17	□□□□□ -0.46
SCAPER-223	ENST00000569784	PLEKHG3	A1L390	1219 aa		12.16	□□□□□ -0.46
SCAPER-223	ENST00000569784	FAM182B	Q5T319	152 aa		12.16	□□□□□ -0.46
SCAPER-223	ENST00000569784	SIN3A	Q96ST3	1273 aa		12.16	□□□□□ -0.46
SCAPER-223	ENST00000569784	RGPD1	P0DJD0	1748 aa		12.16	□□□□□ -0.46
SCAPER-223	ENST00000569784	CRYBG1	Q9Y4K1	1723 aa		12.16	□□□□□ -0.46
SCAPER-223	ENST00000569784	POLR3A	O14802	1390 aa	Predicted RBP	12.16	□□□□□ -0.46
SCAPER-223	ENST00000569784	NLRP6	P59044	892 aa		12.15	□□□□□ -0.46
SCAPER-223	ENST00000569784	CABP1	Q9NZU7	370 aa		12.15	□□□□□ -0.46
SCAPER-223	ENST00000569784	SPATA31A1	Q5TZJ5	1347 aa		12.13	□□□□□ -0.47
SCAPER-223	ENST00000569784	KLHL34	Q8N239	644 aa		12.13	□□□□□ -0.47
SCAPER-223	ENST00000569784	TRPM1	Q7Z4N2	1603 aa		12.12	□□□□□ -0.47
SCAPER-223	ENST00000569784	PSD	A5PKW4	1024 aa	Predicted RBP	12.12	□□□□□ -0.47
SCAPER-223	ENST00000569784	SOX12	O15370	315 aa		12.12	□□□□□ -0.47
SCAPER-223	ENST00000569784	GC	P02774	474 aa		12.12	□□□□□ -0.47
SCAPER-223	ENST00000569784	EN1	Q05925	392 aa	Predicted RBP	12.12	□□□□□ -0.47
SCAPER-223	ENST00000569784	FAM196A	Q6ZSG2	479 aa		12.12	□□□□□ -0.47
SCAPER-223	ENST00000569784	NRK	Q7Z2Y5	1582 aa		12.11	□□□□□ -0.47
SCAPER-223	ENST00000569784	BRD4	O60885	1362 aa	Predicted RBP	12.11	□□□□□ -0.47
SCAPER-223	ENST00000569784	TONSL	Q96HA7	1378 aa		12.11	□□□□□ -0.47
SCAPER-223	ENST00000569784	TRIM37	O94972	964 aa		12.11	□□□□□ -0.47
SCAPER-223	ENST00000569784	CSB-PGBD3	P0DP91	1061 aa		12.11	□□□□□ -0.47
SCAPER-223	ENST00000569784	LARP1	Q6PKG0	1096 aa	Known RBP	12.11	□□□□□ -0.47
SCAPER-223	ENST00000569784	TCP11L2	Q8N4U5	519 aa		12.11	□□□□□ -0.47
SCAPER-223	ENST00000569784	SSH2	Q76I76	1423 aa		12.11	□□□□□ -0.47
SCAPER-223	ENST00000569784	APBA3	O96018	575 aa		12.1	□□□□□ -0.47
SCAPER-223	ENST00000569784	TOM1L2	Q6ZVM7	507 aa		12.1	□□□□□ -0.47
SCAPER-223	ENST00000569784	THSD7A	Q9UPZ6	1657 aa		12.1	□□□□□ -0.47
SCAPER-223	ENST00000569784	TMC1	Q8TDI8	760 aa		12.09	□□□□□ -0.47
SCAPER-223	ENST00000569784	CARD11	Q9BXL7	1154 aa		12.09	□□□□□ -0.47
SCAPER-223	ENST00000569784	THRAP3	Q9Y2W1	955 aa	Known RBP	12.09	□□□□□ -0.47
SCAPER-223	ENST00000569784	USP6	P35125	1406 aa		12.09	□□□□□ -0.47
SCAPER-223	ENST00000569784	CPD	O75976	1380 aa		12.08	□□□□□ -0.48
SCAPER-223	ENST00000569784	BARGIN	Q6ZT62	677 aa		12.08	□□□□□ -0.48
SCAPER-223	ENST00000569784	KCNH5	Q8NCM2	988 aa		12.08	□□□□□ -0.48
SCAPER-223	ENST00000569784	USP19	O94966	1318 aa		12.08	□□□□□ -0.48
SCAPER-223	ENST00000569784	CAMTA1	Q9Y6Y1	1673 aa		12.07	□□□□□ -0.48
SCAPER-223	ENST00000569784	NUBP1	P53384	320 aa		12.07	□□□□□ -0.48
SCAPER-223	ENST00000569784	EZH2	Q15910	746 aa	Known RBP	12.07	□□□□□ -0.48
SCAPER-223	ENST00000569784	NBPF14	Q5TI25	921 aa		12.07	□□□□□ -0.48
SCAPER-223	ENST00000569784	KTN1	Q86UP2	1357 aa	Known RBP	12.06	□□□□□ -0.48
SCAPER-223	ENST00000569784	C11orf95	C9JLR9	678 aa	Predicted RBP	12.06	□□□□□ -0.48
SCAPER-223	ENST00000569784	R3HDM1	Q15032	1099 aa	Known RBP	12.06	□□□□□ -0.48
SCAPER-223	ENST00000569784	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	12.06	□□□□□ -0.48
SCAPER-223	ENST00000569784	CRB1	P82279	1406 aa		12.05	□□□□□ -0.48
SCAPER-223	ENST00000569784	DDB1	Q16531	1140 aa		12.05	□□□□□ -0.48
SCAPER-223	ENST00000569784	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	12.05	□□□□□ -0.48
SCAPER-223	ENST00000569784	ZBTB47	Q9UFB7	747 aa	Predicted RBP	12.05	□□□□□ -0.48
SCAPER-223	ENST00000569784	COL5A2	P05997	1499 aa	Predicted RBP	12.05	□□□□□ -0.48
SCAPER-223	ENST00000569784	TNS1	Q9HBL0	1735 aa	Known RBP	12.05	□□□□□ -0.48
SCAPER-223	ENST00000569784	TTC21B	Q7Z4L5	1316 aa		12.05	□□□□□ -0.48
SCAPER-223	ENST00000569784	TTC21A	Q8NDW8	1320 aa		12.05	□□□□□ -0.48
SCAPER-223	ENST00000569784	AKAP12	Q02952	1782 aa		12.05	□□□□□ -0.48
SCAPER-223	ENST00000569784	LMO7	Q8WWI1	1683 aa		12.04	□□□□□ -0.48
SCAPER-223	ENST00000569784	RASEF	Q8IZ41	740 aa		12.04	□□□□□ -0.48
SCAPER-223	ENST00000569784	PIK3C2A	O00443	1686 aa		12.03	□□□□□ -0.48
SCAPER-223	ENST00000569784	SPOCK2	Q92563	424 aa		12.03	□□□□□ -0.48
SCAPER-223	ENST00000569784	AATK	Q6ZMQ8	1374 aa		12.03	□□□□□ -0.48
SCAPER-223	ENST00000569784	PARP4	Q9UKK3	1724 aa	Known RBP	12.02	□□□□□ -0.49
SCAPER-223	ENST00000569784	PARD3	Q8TEW0	1356 aa		12.02	□□□□□ -0.49
SCAPER-223	ENST00000569784	RGPD5	Q99666	1765 aa		12.02	□□□□□ -0.49
SCAPER-223	ENST00000569784	EP400	Q96L91	3159 aa		12.02	□□□□□ -0.49
SCAPER-223	ENST00000569784	SLIT3	O75094	1523 aa		12.01	□□□□□ -0.49
SCAPER-223	ENST00000569784	EVX2	Q03828	476 aa		12.01	□□□□□ -0.49
SCAPER-223	ENST00000569784	CDCA7	Q9BWT1	371 aa	Predicted RBP	12.01	□□□□□ -0.49
SCAPER-223	ENST00000569784	TERF2IP	Q9NYB0	399 aa		12.01	□□□□□ -0.49
SCAPER-223	ENST00000569784	WDR17	Q8IZU2	1322 aa		12.01	□□□□□ -0.49
SCAPER-223	ENST00000569784	OVOS2	A0A0G2JMS6	1433 aa		12.01	□□□□□ -0.49
SCAPER-223	ENST00000569784	OVOS2	A0A0J9YW53	1432 aa		12.01	□□□□□ -0.49
SCAPER-223	ENST00000569784	CPSF1	Q10570	1443 aa	Known RBP	12.01	□□□□□ -0.49
SCAPER-223	ENST00000569784	OVOS2	Q6IE36	1432 aa		12.01	□□□□□ -0.49
SCAPER-223	ENST00000569784	LRP5	O75197	1615 aa		12	□□□□□ -0.49
SCAPER-223	ENST00000569784	EXOC5	O00471	708 aa		12	□□□□□ -0.49
SCAPER-223	ENST00000569784	CAMKK2	Q96RR4	588 aa		12	□□□□□ -0.49
SCAPER-223	ENST00000569784	PPP1R1B	Q9UD71	204 aa	Predicted RBP	12	□□□□□ -0.49
SCAPER-223	ENST00000569784	DISP2	A7MBM2	1401 aa		12	□□□□□ -0.49
SCAPER-223	ENST00000569784	C19orf67	A6NJJ6	358 aa		11.99	□□□□□ -0.49
SCAPER-223	ENST00000569784	NLRP2	Q9NX02	1062 aa		11.99	□□□□□ -0.49
SCAPER-223	ENST00000569784	WNK3	Q9BYP7	1800 aa		11.98	□□□□□ -0.49
SCAPER-223	ENST00000569784	MON2	Q7Z3U7	1717 aa		11.98	□□□□□ -0.49
SCAPER-223	ENST00000569784	SLC24A1	O60721	1099 aa		11.98	□□□□□ -0.49
SCAPER-223	ENST00000569784	TRIM26	Q12899	539 aa	Predicted RBP	11.98	□□□□□ -0.49
SCAPER-223	ENST00000569784	ARHGEF25	Q86VW2	580 aa		11.98	□□□□□ -0.49
SCAPER-223	ENST00000569784	AXIN2	Q9Y2T1	843 aa		11.98	□□□□□ -0.49
SCAPER-223	ENST00000569784	LRRC37A3	O60309	1634 aa		11.97	□□□□□ -0.49
SCAPER-223	ENST00000569784	NME9	Q86XW9	330 aa		11.97	□□□□□ -0.49
SCAPER-223	ENST00000569784	CARD10	Q9BWT7	1032 aa		11.97	□□□□□ -0.49
SCAPER-223	ENST00000569784	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.97	□□□□□ -0.49
SCAPER-223	ENST00000569784	LTN1	O94822	1766 aa		11.97	□□□□□ -0.49
SCAPER-223	ENST00000569784	CCDC7	Q96M83	1385 aa		11.96	□□□□□ -0.49
SCAPER-223	ENST00000569784	SBNO2	Q9Y2G9	1366 aa		11.96	□□□□□ -0.49
SCAPER-223	ENST00000569784	HAX1	O00165	279 aa		11.96	□□□□□ -0.49
SCAPER-223	ENST00000569784	SLC12A5	Q9H2X9	1139 aa		11.96	□□□□□ -0.49
SCAPER-223	ENST00000569784	RREB1	Q92766	1687 aa		11.96	□□□□□ -0.5
SCAPER-223	ENST00000569784	COL18A1	P39060	1754 aa		11.95	□□□□□ -0.5
SCAPER-223	ENST00000569784	NUP188	Q5SRE5	1749 aa		11.95	□□□□□ -0.5
SCAPER-223	ENST00000569784	LTV1	Q96GA3	475 aa	Predicted RBP	11.95	□□□□□ -0.5
SCAPER-223	ENST00000569784	COG3	Q96JB2	828 aa		11.94	□□□□□ -0.5
SCAPER-223	ENST00000569784	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.94	□□□□□ -0.5
SCAPER-223	ENST00000569784	SPON1	Q9HCB6	807 aa		11.94	□□□□□ -0.5

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