RNA–Protein interactions for RNA: ENST00000569745.5

CCNDBP1-215, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 5

Gene CCNDBP1, Length 1,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-215ENST00000569745 CRB1P82279 1406 aa22.87■■□□□ 1.25
CCNDBP1-215ENST00000569745 ANKRD36BQ8N2N9 1353 aa22.87■■□□□ 1.25
CCNDBP1-215ENST00000569745 FAM182BQ5T319 152 aa22.86■■□□□ 1.25
CCNDBP1-215ENST00000569745 WDR17Q8IZU2 1322 aa22.85■■□□□ 1.25
CCNDBP1-215ENST00000569745 THSD7AQ9UPZ6 1657 aa22.84■■□□□ 1.25
CCNDBP1-215ENST00000569745 NFAT5O94916 1531 aa22.84■■□□□ 1.25
CCNDBP1-215ENST00000569745 EIF4G2P78344 907 aaKnown RBP eCLIP22.84■■□□□ 1.25
CCNDBP1-215ENST00000569745 PDE3BQ13370 1112 aa22.84■■□□□ 1.25
CCNDBP1-215ENST00000569745 CSB-PGBD3P0DP91 1061 aa22.83■■□□□ 1.25
CCNDBP1-215ENST00000569745 COG3Q96JB2 828 aa22.83■■□□□ 1.25
CCNDBP1-215ENST00000569745 COL18A1P39060 1754 aa22.81■■□□□ 1.24
CCNDBP1-215ENST00000569745 FAM196AQ6ZSG2 479 aa22.81■■□□□ 1.24
CCNDBP1-215ENST00000569745 OVOS2A0A0J9YW53 1432 aa22.81■■□□□ 1.24
CCNDBP1-215ENST00000569745 OVOS2Q6IE36 1432 aa22.81■■□□□ 1.24
CCNDBP1-215ENST00000569745 DEFB132Q7Z7B7 95 aa22.8■■□□□ 1.24
CCNDBP1-215ENST00000569745 CARD10Q9BWT7 1032 aa22.8■■□□□ 1.24
CCNDBP1-215ENST00000569745 USP54Q70EL1 1684 aa22.78■■□□□ 1.24
CCNDBP1-215ENST00000569745 FYB1O15117 783 aa22.78■■□□□ 1.24
CCNDBP1-215ENST00000569745 HSPA5P11021 654 aaKnown RBP22.78■■□□□ 1.24
CCNDBP1-215ENST00000569745 CDCA7Q9BWT1 371 aaPredicted RBP22.77■■□□□ 1.24
CCNDBP1-215ENST00000569745 ABCC6O95255 1503 aa22.77■■□□□ 1.24
CCNDBP1-215ENST00000569745 BAG6P46379 1132 aa22.76■■□□□ 1.23
CCNDBP1-215ENST00000569745 DDB1Q16531 1140 aa22.76■■□□□ 1.23
CCNDBP1-215ENST00000569745 GGNBP2Q9H3C7 697 aa22.76■■□□□ 1.23
CCNDBP1-215ENST00000569745 IP6K1Q92551 441 aa22.75■■□□□ 1.23
CCNDBP1-215ENST00000569745 CARD14Q9BXL6 1004 aa22.75■■□□□ 1.23
CCNDBP1-215ENST00000569745 ERBB3P21860 1342 aa22.74■■□□□ 1.23
CCNDBP1-215ENST00000569745 ANKRD24Q8TF21 1146 aa22.74■■□□□ 1.23
CCNDBP1-215ENST00000569745 POLR3GLQ9BT43 218 aa22.74■■□□□ 1.23
CCNDBP1-215ENST00000569745 CCDC7Q96M83 1385 aa22.73■■□□□ 1.23
CCNDBP1-215ENST00000569745 C11orf95C9JLR9 678 aaPredicted RBP22.73■■□□□ 1.23
CCNDBP1-215ENST00000569745 TRIM37O94972 964 aa22.73■■□□□ 1.23
CCNDBP1-215ENST00000569745 NLRP2Q9NX02 1062 aa22.73■■□□□ 1.23
CCNDBP1-215ENST00000569745 FBLN1P23142 703 aa22.72■■□□□ 1.23
CCNDBP1-215ENST00000569745 MAP3K19Q56UN5 1328 aa22.72■■□□□ 1.23
CCNDBP1-215ENST00000569745 AMPHP49418 695 aa22.71■■□□□ 1.23
CCNDBP1-215ENST00000569745 EXOC5O00471 708 aa22.7■■□□□ 1.22
CCNDBP1-215ENST00000569745 EN1Q05925 392 aaPredicted RBP22.7■■□□□ 1.22
CCNDBP1-215ENST00000569745 EP400Q96L91 3159 aa22.7■■□□□ 1.22
CCNDBP1-215ENST00000569745 HOXC9P31274 260 aa22.68■■□□□ 1.22
CCNDBP1-215ENST00000569745 RGPD5Q99666 1765 aa22.68■■□□□ 1.22
CCNDBP1-215ENST00000569745 NSD3Q9BZ95 1437 aa22.67■■□□□ 1.22
CCNDBP1-215ENST00000569745 PARP4Q9UKK3 1724 aaKnown RBP22.67■■□□□ 1.22
CCNDBP1-215ENST00000569745 APBA3O96018 575 aa22.67■■□□□ 1.22
CCNDBP1-215ENST00000569745 RRS1Q15050 365 aaKnown RBP22.66■■□□□ 1.22
CCNDBP1-215ENST00000569745 LTV1Q96GA3 475 aaPredicted RBP22.66■■□□□ 1.22
CCNDBP1-215ENST00000569745 DISP2A7MBM2 1401 aa22.66■■□□□ 1.22
CCNDBP1-215ENST00000569745 MARCH10Q8NA82 808 aaPredicted RBP22.65■■□□□ 1.22
CCNDBP1-215ENST00000569745 OVOS2A0A0G2JMS6 1433 aa22.65■■□□□ 1.22
CCNDBP1-215ENST00000569745 LTN1O94822 1766 aa22.65■■□□□ 1.22
CCNDBP1-215ENST00000569745 IL2RBP14784 551 aa22.64■■□□□ 1.22
CCNDBP1-215ENST00000569745 EZH2Q15910 746 aaKnown RBP22.63■■□□□ 1.21
CCNDBP1-215ENST00000569745 CAMKK2Q96RR4 588 aa22.63■■□□□ 1.21
CCNDBP1-215ENST00000569745 RGPD1P0DJD0 1748 aa22.63■■□□□ 1.21
CCNDBP1-215ENST00000569745 MYOM1P52179 1685 aa22.63■■□□□ 1.21
CCNDBP1-215ENST00000569745 CGNL1Q0VF96 1302 aa22.63■■□□□ 1.21
CCNDBP1-215ENST00000569745 RTL1A6NKG5 1358 aa22.61■■□□□ 1.21
CCNDBP1-215ENST00000569745 LRRC37A3O60309 1634 aa22.61■■□□□ 1.21
CCNDBP1-215ENST00000569745 PANK3Q9H999 370 aa22.61■■□□□ 1.21
CCNDBP1-215ENST00000569745 BCL9O00512 1426 aa22.58■■□□□ 1.21
CCNDBP1-215ENST00000569745 PARD3Q8TEW0 1356 aa22.58■■□□□ 1.21
CCNDBP1-215ENST00000569745 BCL11BQ9C0K0 894 aaPredicted RBP22.58■■□□□ 1.21
CCNDBP1-215ENST00000569745 KIF24Q5T7B8 1368 aa22.57■■□□□ 1.2
CCNDBP1-215ENST00000569745 HSP90AB2PQ58FF8 381 aa22.57■■□□□ 1.2
CCNDBP1-215ENST00000569745 TNS1Q9HBL0 1735 aaKnown RBP22.56■■□□□ 1.2
CCNDBP1-215ENST00000569745 TNS2Q63HR2 1409 aa22.56■■□□□ 1.2
CCNDBP1-215ENST00000569745 INSRP06213 1382 aa22.55■■□□□ 1.2
CCNDBP1-215ENST00000569745 FLT4P35916 1363 aa22.55■■□□□ 1.2
CCNDBP1-215ENST00000569745 PLSCR1O15162 318 aa22.55■■□□□ 1.2
CCNDBP1-215ENST00000569745 PEAK1Q9H792 1746 aa22.55■■□□□ 1.2
CCNDBP1-215ENST00000569745 WNK3Q9BYP7 1800 aa22.54■■□□□ 1.2
CCNDBP1-215ENST00000569745 NBPF6Q5VWK0 638 aa22.54■■□□□ 1.2
CCNDBP1-215ENST00000569745 NBPF4Q96M43 638 aa22.54■■□□□ 1.2
CCNDBP1-215ENST00000569745 EMILIN1Q9Y6C2 1016 aa22.54■■□□□ 1.2
CCNDBP1-215ENST00000569745 KIF20BQ96Q89 1820 aa22.54■■□□□ 1.2
CCNDBP1-215ENST00000569745 SMG6Q86US8 1419 aaKnown RBP22.53■■□□□ 1.2
CCNDBP1-215ENST00000569745 PTF1AQ7RTS3 328 aa22.53■■□□□ 1.2
CCNDBP1-215ENST00000569745 PPM1GO15355 546 aaPredicted RBP22.52■■□□□ 1.2
CCNDBP1-215ENST00000569745 PSDA5PKW4 1024 aaPredicted RBP22.51■■□□□ 1.19
CCNDBP1-215ENST00000569745 KIF7Q2M1P5 1343 aa22.51■■□□□ 1.19
CCNDBP1-215ENST00000569745 DDX54Q8TDD1 881 aaKnown RBP22.5■■□□□ 1.19
CCNDBP1-215ENST00000569745 POLKQ9UBT6 870 aa22.5■■□□□ 1.19
CCNDBP1-215ENST00000569745 NBPF14Q5TI25 921 aa22.5■■□□□ 1.19
CCNDBP1-215ENST00000569745 KNSTRNQ9Y448 316 aa22.5■■□□□ 1.19
CCNDBP1-215ENST00000569745 WASHC2AQ641Q2 1341 aa22.49■■□□□ 1.19
CCNDBP1-215ENST00000569745 FAM208AQ9UK61 1670 aaKnown RBP22.49■■□□□ 1.19
CCNDBP1-215ENST00000569745 KCNQ2O43526 872 aa22.49■■□□□ 1.19
CCNDBP1-215ENST00000569745 TNNT2P45379 298 aaPredicted RBP22.49■■□□□ 1.19
CCNDBP1-215ENST00000569745 R3HDM1Q15032 1099 aaKnown RBP22.49■■□□□ 1.19
CCNDBP1-215ENST00000569745 USHBP1Q8N6Y0 703 aa22.49■■□□□ 1.19
CCNDBP1-215ENST00000569745 ACSBG1Q96GR2 724 aa22.49■■□□□ 1.19
CCNDBP1-215ENST00000569745 ZCRB1Q8TBF4 217 aaKnown RBP22.48■■□□□ 1.19
CCNDBP1-215ENST00000569745 RAPGEF4Q8WZA2 1011 aa22.48■■□□□ 1.19
CCNDBP1-215ENST00000569745 NSD2O96028 1365 aa22.47■■□□□ 1.19
CCNDBP1-215ENST00000569745 TATP17735 454 aaPredicted RBP22.45■■□□□ 1.18
CCNDBP1-215ENST00000569745 MORC1Q86VD1 984 aa22.45■■□□□ 1.18
CCNDBP1-215ENST00000569745 PROM2Q8N271 834 aa22.44■■□□□ 1.18
CCNDBP1-215ENST00000569745 MEGF6O75095 1541 aa22.43■■□□□ 1.18
CCNDBP1-215ENST00000569745 SBF2Q86WG5 1849 aa22.43■■□□□ 1.18
CCNDBP1-215ENST00000569745 TXNRD1Q16881 649 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms