RNA–Protein interactions for RNA: ENST00000569380.5

SPSB3-211, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-211ENST00000569380 ZC3H6P61129 1189 aaKnown RBP27.35■■□□□ 1.97
SPSB3-211ENST00000569380 HSP90AB2PQ58FF8 381 aa27.34■■□□□ 1.97
SPSB3-211ENST00000569380 KCNH5Q8NCM2 988 aa27.34■■□□□ 1.97
SPSB3-211ENST00000569380 AMPHP49418 695 aa27.32■■□□□ 1.96
SPSB3-211ENST00000569380 ADAMTS8Q9UP79 889 aa27.32■■□□□ 1.96
SPSB3-211ENST00000569380 INSRP06213 1382 aa27.31■■□□□ 1.96
SPSB3-211ENST00000569380 WDR43Q15061 677 aaKnown RBP eCLIP27.3■■□□□ 1.96
SPSB3-211ENST00000569380 ARHGEF25Q86VW2 580 aa27.3■■□□□ 1.96
SPSB3-211ENST00000569380 DIAPH1O60610 1272 aaKnown RBP27.3■■□□□ 1.96
SPSB3-211ENST00000569380 HOXC9P31274 260 aa27.3■■□□□ 1.96
SPSB3-211ENST00000569380 FLT4P35916 1363 aa27.29■■□□□ 1.96
SPSB3-211ENST00000569380 COL22A1Q8NFW1 1626 aaPredicted RBP27.28■■□□□ 1.96
SPSB3-211ENST00000569380 U2SURPO15042 1029 aaKnown RBP27.27■■□□□ 1.96
SPSB3-211ENST00000569380 IL13P35225 146 aa27.27■■□□□ 1.96
SPSB3-211ENST00000569380 EIF4A2Q14240 407 aaKnown RBP27.27■■□□□ 1.96
SPSB3-211ENST00000569380 RGPD5Q99666 1765 aa27.26■■□□□ 1.96
SPSB3-211ENST00000569380 ADAMTS2O95450 1211 aa27.26■■□□□ 1.95
SPSB3-211ENST00000569380 CHRNA2Q15822 529 aa27.26■■□□□ 1.95
SPSB3-211ENST00000569380 LTV1Q96GA3 475 aaPredicted RBP27.25■■□□□ 1.95
SPSB3-211ENST00000569380 C8orf37Q96NL8 207 aa27.25■■□□□ 1.95
SPSB3-211ENST00000569380 KIAA0232Q92628 1395 aa27.25■■□□□ 1.95
SPSB3-211ENST00000569380 CCDC146Q8IYE0 955 aa27.25■■□□□ 1.95
SPSB3-211ENST00000569380 AXIN2Q9Y2T1 843 aa27.25■■□□□ 1.95
SPSB3-211ENST00000569380 HAP1P54257 671 aaPredicted RBP27.24■■□□□ 1.95
SPSB3-211ENST00000569380 IP6K1Q92551 441 aa27.24■■□□□ 1.95
SPSB3-211ENST00000569380 AFF2P51816 1311 aa27.23■■□□□ 1.95
SPSB3-211ENST00000569380 U2AF1L5P0DN76 240 aaPredicted RBP27.23■■□□□ 1.95
SPSB3-211ENST00000569380 U2AF1Q01081 240 aaKnown RBP eCLIP27.23■■□□□ 1.95
SPSB3-211ENST00000569380 COL18A1P39060 1754 aa27.23■■□□□ 1.95
SPSB3-211ENST00000569380 RTL1A6NKG5 1358 aa27.22■■□□□ 1.95
SPSB3-211ENST00000569380 ZNF772Q68DY9 489 aaPredicted RBP27.21■■□□□ 1.95
SPSB3-211ENST00000569380 KIF24Q5T7B8 1368 aa27.2■■□□□ 1.95
SPSB3-211ENST00000569380 BLMP54132 1417 aaPredicted RBP27.2■■□□□ 1.94
SPSB3-211ENST00000569380 HNRNPUQ00839 825 aaKnown RBP eCLIP27.2■■□□□ 1.94
SPSB3-211ENST00000569380 NUDCQ9Y266 331 aa27.2■■□□□ 1.94
SPSB3-211ENST00000569380 HMOX1P09601 288 aa27.19■■□□□ 1.94
SPSB3-211ENST00000569380 RGPD2P0DJD1 1756 aa27.19■■□□□ 1.94
SPSB3-211ENST00000569380 RGPD1P0DJD0 1748 aa27.18■■□□□ 1.94
SPSB3-211ENST00000569380 CPDO75976 1380 aa27.18■■□□□ 1.94
SPSB3-211ENST00000569380 PRDM11Q9NQV5 511 aa27.17■■□□□ 1.94
SPSB3-211ENST00000569380 AEBP1Q8IUX7 1158 aa27.16■■□□□ 1.94
SPSB3-211ENST00000569380 NGLY1Q96IV0 654 aa27.14■■□□□ 1.94
SPSB3-211ENST00000569380 EYA1Q99502 592 aa27.14■■□□□ 1.93
SPSB3-211ENST00000569380 FAM83GA6ND36 823 aa27.13■■□□□ 1.93
SPSB3-211ENST00000569380 USHBP1Q8N6Y0 703 aa27.13■■□□□ 1.93
SPSB3-211ENST00000569380 ANKRD24Q8TF21 1146 aa27.13■■□□□ 1.93
SPSB3-211ENST00000569380 SALL2Q9Y467 1007 aaPredicted RBP27.13■■□□□ 1.93
SPSB3-211ENST00000569380 LMO7Q8WWI1 1683 aa27.13■■□□□ 1.93
SPSB3-211ENST00000569380 CAMTA1Q9Y6Y1 1673 aa27.12■■□□□ 1.93
SPSB3-211ENST00000569380 RSPH6AQ9H0K4 717 aa27.12■■□□□ 1.93
SPSB3-211ENST00000569380 SULT6B1Q6IMI4 303 aa27.1■■□□□ 1.93
SPSB3-211ENST00000569380 NBPF6Q5VWK0 638 aa27.09■■□□□ 1.93
SPSB3-211ENST00000569380 NBPF4Q96M43 638 aa27.09■■□□□ 1.93
SPSB3-211ENST00000569380 PLEKHF1Q96S99 279 aa27.09■■□□□ 1.93
SPSB3-211ENST00000569380 PRKAR2BP31323 418 aa27.09■■□□□ 1.93
SPSB3-211ENST00000569380 ERBB3P21860 1342 aa27.08■■□□□ 1.93
SPSB3-211ENST00000569380 IGSF1Q8N6C5 1336 aa27.08■■□□□ 1.93
SPSB3-211ENST00000569380 APAF1O14727 1248 aa27.08■■□□□ 1.93
SPSB3-211ENST00000569380 RXRBP28702 533 aa27.07■■□□□ 1.92
SPSB3-211ENST00000569380 RUNDC1Q96C34 613 aa27.07■■□□□ 1.92
SPSB3-211ENST00000569380 ABCC6O95255 1503 aa27.06■■□□□ 1.92
SPSB3-211ENST00000569380 FNBP4Q8N3X1 1017 aaPredicted RBP27.06■■□□□ 1.92
SPSB3-211ENST00000569380 QTRT2Q9H974 415 aaKnown RBP27.06■■□□□ 1.92
SPSB3-211ENST00000569380 USP21Q9UK80 565 aa27.06■■□□□ 1.92
SPSB3-211ENST00000569380 RRP7AQ9Y3A4 280 aaKnown RBP27.06■■□□□ 1.92
SPSB3-211ENST00000569380 FCHSD2O94868 740 aa27.05■■□□□ 1.92
SPSB3-211ENST00000569380 PHACTR3Q96KR7 559 aa27.05■■□□□ 1.92
SPSB3-211ENST00000569380 COL5A2P05997 1499 aaPredicted RBP27.03■■□□□ 1.92
SPSB3-211ENST00000569380 COL14A1Q05707 1796 aaKnown RBP27.03■■□□□ 1.92
SPSB3-211ENST00000569380 TCP11L2Q8N4U5 519 aa27.03■■□□□ 1.92
SPSB3-211ENST00000569380 BCL9LQ86UU0 1499 aa27.03■■□□□ 1.92
SPSB3-211ENST00000569380 CSB-PGBD3P0DP91 1061 aa27.02■■□□□ 1.92
SPSB3-211ENST00000569380 STRN4Q9NRL3 753 aa27.02■■□□□ 1.92
SPSB3-211ENST00000569380 BTG4Q9NY30 223 aa27.02■■□□□ 1.92
SPSB3-211ENST00000569380 NEUROD2Q15784 382 aa27.01■■□□□ 1.91
SPSB3-211ENST00000569380 PLCH1Q4KWH8 1693 aa27.01■■□□□ 1.91
SPSB3-211ENST00000569380 KDRP35968 1356 aa27■■□□□ 1.91
SPSB3-211ENST00000569380 NLRP2Q9NX02 1062 aa27■■□□□ 1.91
SPSB3-211ENST00000569380 RGS12O14924 1447 aa27■■□□□ 1.91
SPSB3-211ENST00000569380 ATRNO75882 1429 aa26.99■■□□□ 1.91
SPSB3-211ENST00000569380 RBM6P78332 1123 aaKnown RBP26.99■■□□□ 1.91
SPSB3-211ENST00000569380 FAM208AQ9UK61 1670 aaKnown RBP26.98■■□□□ 1.91
SPSB3-211ENST00000569380 MAPK8IP3Q9UPT6 1336 aa26.98■■□□□ 1.91
SPSB3-211ENST00000569380 SLIT2O94813 1529 aa26.98■■□□□ 1.91
SPSB3-211ENST00000569380 LARP1Q6PKG0 1096 aaKnown RBP26.97■■□□□ 1.91
SPSB3-211ENST00000569380 ZBED9Q6R2W3 1325 aa26.97■■□□□ 1.91
SPSB3-211ENST00000569380 TRPC5Q9UL62 973 aaPredicted RBP26.97■■□□□ 1.91
SPSB3-211ENST00000569380 NCAPD2Q15021 1401 aa26.96■■□□□ 1.91
SPSB3-211ENST00000569380 WDR17Q8IZU2 1322 aa26.95■■□□□ 1.9
SPSB3-211ENST00000569380 TMPOP42166 694 aaKnown RBP26.94■■□□□ 1.9
SPSB3-211ENST00000569380 EVA1CP58658 441 aa26.94■■□□□ 1.9
SPSB3-211ENST00000569380 TOM1L2Q6ZVM7 507 aa26.93■■□□□ 1.9
SPSB3-211ENST00000569380 PNNQ9H307 717 aaKnown RBP26.93■■□□□ 1.9
SPSB3-211ENST00000569380 NRAPQ86VF7 1730 aa26.93■■□□□ 1.9
SPSB3-211ENST00000569380 DLG5Q8TDM6 1919 aa26.92■■□□□ 1.9
SPSB3-211ENST00000569380 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.91■■□□□ 1.9
SPSB3-211ENST00000569380 UNC5CLQ8IV45 518 aa26.9■■□□□ 1.9
SPSB3-211ENST00000569380 MTHFSDQ2M296 383 aaKnown RBP26.89■■□□□ 1.9
SPSB3-211ENST00000569380 USP35Q9P2H5 1018 aa26.89■■□□□ 1.9
SPSB3-211ENST00000569380 MEGF6O75095 1541 aa26.89■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms