RNA–Protein interactions for RNA: ENST00000569380.5

SPSB3-211, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,781 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-211ENST00000569380 ZC3H6P61129 1189 aaKnown RBP27.35■■□□□ 1.97
SPSB3-211ENST00000569380 HSP90AB2PQ58FF8 381 aa27.34■■□□□ 1.97
SPSB3-211ENST00000569380 KCNH5Q8NCM2 988 aa27.34■■□□□ 1.97
SPSB3-211ENST00000569380 AMPHP49418 695 aa27.32■■□□□ 1.96
SPSB3-211ENST00000569380 ADAMTS8Q9UP79 889 aa27.32■■□□□ 1.96
SPSB3-211ENST00000569380 INSRP06213 1382 aa27.31■■□□□ 1.96
SPSB3-211ENST00000569380 WDR43Q15061 677 aaKnown RBP eCLIP27.3■■□□□ 1.96
SPSB3-211ENST00000569380 ARHGEF25Q86VW2 580 aa27.3■■□□□ 1.96
SPSB3-211ENST00000569380 DIAPH1O60610 1272 aaKnown RBP27.3■■□□□ 1.96
SPSB3-211ENST00000569380 HOXC9P31274 260 aa27.3■■□□□ 1.96
SPSB3-211ENST00000569380 FLT4P35916 1363 aa27.29■■□□□ 1.96
SPSB3-211ENST00000569380 COL22A1Q8NFW1 1626 aaPredicted RBP27.28■■□□□ 1.96
SPSB3-211ENST00000569380 U2SURPO15042 1029 aaKnown RBP27.27■■□□□ 1.96
SPSB3-211ENST00000569380 IL13P35225 146 aa27.27■■□□□ 1.96
SPSB3-211ENST00000569380 EIF4A2Q14240 407 aaKnown RBP27.27■■□□□ 1.96
SPSB3-211ENST00000569380 RGPD5Q99666 1765 aa27.26■■□□□ 1.96
SPSB3-211ENST00000569380 ADAMTS2O95450 1211 aa27.26■■□□□ 1.95
SPSB3-211ENST00000569380 CHRNA2Q15822 529 aa27.26■■□□□ 1.95
SPSB3-211ENST00000569380 LTV1Q96GA3 475 aaPredicted RBP27.25■■□□□ 1.95
SPSB3-211ENST00000569380 C8orf37Q96NL8 207 aa27.25■■□□□ 1.95
SPSB3-211ENST00000569380 KIAA0232Q92628 1395 aa27.25■■□□□ 1.95
SPSB3-211ENST00000569380 CCDC146Q8IYE0 955 aa27.25■■□□□ 1.95
SPSB3-211ENST00000569380 AXIN2Q9Y2T1 843 aa27.25■■□□□ 1.95
SPSB3-211ENST00000569380 HAP1P54257 671 aaPredicted RBP27.24■■□□□ 1.95
SPSB3-211ENST00000569380 IP6K1Q92551 441 aa27.24■■□□□ 1.95
SPSB3-211ENST00000569380 AFF2P51816 1311 aa27.23■■□□□ 1.95
SPSB3-211ENST00000569380 U2AF1L5P0DN76 240 aaPredicted RBP27.23■■□□□ 1.95
SPSB3-211ENST00000569380 U2AF1Q01081 240 aaKnown RBP eCLIP27.23■■□□□ 1.95
SPSB3-211ENST00000569380 COL18A1P39060 1754 aa27.23■■□□□ 1.95
SPSB3-211ENST00000569380 RTL1A6NKG5 1358 aa27.22■■□□□ 1.95
SPSB3-211ENST00000569380 ZNF772Q68DY9 489 aaPredicted RBP27.21■■□□□ 1.95
SPSB3-211ENST00000569380 KIF24Q5T7B8 1368 aa27.2■■□□□ 1.95
SPSB3-211ENST00000569380 BLMP54132 1417 aaPredicted RBP27.2■■□□□ 1.94
SPSB3-211ENST00000569380 HNRNPUQ00839 825 aaKnown RBP eCLIP27.2■■□□□ 1.94
SPSB3-211ENST00000569380 NUDCQ9Y266 331 aa27.2■■□□□ 1.94
SPSB3-211ENST00000569380 HMOX1P09601 288 aa27.19■■□□□ 1.94
SPSB3-211ENST00000569380 RGPD2P0DJD1 1756 aa27.19■■□□□ 1.94
SPSB3-211ENST00000569380 RGPD1P0DJD0 1748 aa27.18■■□□□ 1.94
SPSB3-211ENST00000569380 CPDO75976 1380 aa27.18■■□□□ 1.94
SPSB3-211ENST00000569380 PRDM11Q9NQV5 511 aa27.17■■□□□ 1.94
SPSB3-211ENST00000569380 AEBP1Q8IUX7 1158 aa27.16■■□□□ 1.94
SPSB3-211ENST00000569380 NGLY1Q96IV0 654 aa27.14■■□□□ 1.94
SPSB3-211ENST00000569380 EYA1Q99502 592 aa27.14■■□□□ 1.93
SPSB3-211ENST00000569380 FAM83GA6ND36 823 aa27.13■■□□□ 1.93
SPSB3-211ENST00000569380 USHBP1Q8N6Y0 703 aa27.13■■□□□ 1.93
SPSB3-211ENST00000569380 ANKRD24Q8TF21 1146 aa27.13■■□□□ 1.93
SPSB3-211ENST00000569380 SALL2Q9Y467 1007 aaPredicted RBP27.13■■□□□ 1.93
SPSB3-211ENST00000569380 LMO7Q8WWI1 1683 aa27.13■■□□□ 1.93
SPSB3-211ENST00000569380 CAMTA1Q9Y6Y1 1673 aa27.12■■□□□ 1.93
SPSB3-211ENST00000569380 RSPH6AQ9H0K4 717 aa27.12■■□□□ 1.93
SPSB3-211ENST00000569380 SULT6B1Q6IMI4 303 aa27.1■■□□□ 1.93
SPSB3-211ENST00000569380 NBPF6Q5VWK0 638 aa27.09■■□□□ 1.93
SPSB3-211ENST00000569380 NBPF4Q96M43 638 aa27.09■■□□□ 1.93
SPSB3-211ENST00000569380 PLEKHF1Q96S99 279 aa27.09■■□□□ 1.93
SPSB3-211ENST00000569380 PRKAR2BP31323 418 aa27.09■■□□□ 1.93
SPSB3-211ENST00000569380 ERBB3P21860 1342 aa27.08■■□□□ 1.93
SPSB3-211ENST00000569380 IGSF1Q8N6C5 1336 aa27.08■■□□□ 1.93
SPSB3-211ENST00000569380 APAF1O14727 1248 aa27.08■■□□□ 1.93
SPSB3-211ENST00000569380 RXRBP28702 533 aa27.07■■□□□ 1.92
SPSB3-211ENST00000569380 RUNDC1Q96C34 613 aa27.07■■□□□ 1.92
SPSB3-211ENST00000569380 ABCC6O95255 1503 aa27.06■■□□□ 1.92
SPSB3-211ENST00000569380 FNBP4Q8N3X1 1017 aaPredicted RBP27.06■■□□□ 1.92
SPSB3-211ENST00000569380 QTRT2Q9H974 415 aaKnown RBP27.06■■□□□ 1.92
SPSB3-211ENST00000569380 USP21Q9UK80 565 aa27.06■■□□□ 1.92
SPSB3-211ENST00000569380 RRP7AQ9Y3A4 280 aaKnown RBP27.06■■□□□ 1.92
SPSB3-211ENST00000569380 FCHSD2O94868 740 aa27.05■■□□□ 1.92
SPSB3-211ENST00000569380 PHACTR3Q96KR7 559 aa27.05■■□□□ 1.92
SPSB3-211ENST00000569380 COL5A2P05997 1499 aaPredicted RBP27.03■■□□□ 1.92
SPSB3-211ENST00000569380 COL14A1Q05707 1796 aaKnown RBP27.03■■□□□ 1.92
SPSB3-211ENST00000569380 TCP11L2Q8N4U5 519 aa27.03■■□□□ 1.92
SPSB3-211ENST00000569380 BCL9LQ86UU0 1499 aa27.03■■□□□ 1.92
SPSB3-211ENST00000569380 CSB-PGBD3P0DP91 1061 aa27.02■■□□□ 1.92
SPSB3-211ENST00000569380 STRN4Q9NRL3 753 aa27.02■■□□□ 1.92
SPSB3-211ENST00000569380 BTG4Q9NY30 223 aa27.02■■□□□ 1.92
SPSB3-211ENST00000569380 NEUROD2Q15784 382 aa27.01■■□□□ 1.91
SPSB3-211ENST00000569380 PLCH1Q4KWH8 1693 aa27.01■■□□□ 1.91
SPSB3-211ENST00000569380 KDRP35968 1356 aa27■■□□□ 1.91
SPSB3-211ENST00000569380 NLRP2Q9NX02 1062 aa27■■□□□ 1.91
SPSB3-211ENST00000569380 RGS12O14924 1447 aa27■■□□□ 1.91
SPSB3-211ENST00000569380 ATRNO75882 1429 aa26.99■■□□□ 1.91
SPSB3-211ENST00000569380 RBM6P78332 1123 aaKnown RBP26.99■■□□□ 1.91
SPSB3-211ENST00000569380 FAM208AQ9UK61 1670 aaKnown RBP26.98■■□□□ 1.91
SPSB3-211ENST00000569380 MAPK8IP3Q9UPT6 1336 aa26.98■■□□□ 1.91
SPSB3-211ENST00000569380 SLIT2O94813 1529 aa26.98■■□□□ 1.91
SPSB3-211ENST00000569380 LARP1Q6PKG0 1096 aaKnown RBP26.97■■□□□ 1.91
SPSB3-211ENST00000569380 ZBED9Q6R2W3 1325 aa26.97■■□□□ 1.91
SPSB3-211ENST00000569380 TRPC5Q9UL62 973 aaPredicted RBP26.97■■□□□ 1.91
SPSB3-211ENST00000569380 NCAPD2Q15021 1401 aa26.96■■□□□ 1.91
SPSB3-211ENST00000569380 WDR17Q8IZU2 1322 aa26.95■■□□□ 1.9
SPSB3-211ENST00000569380 TMPOP42166 694 aaKnown RBP26.94■■□□□ 1.9
SPSB3-211ENST00000569380 EVA1CP58658 441 aa26.94■■□□□ 1.9
SPSB3-211ENST00000569380 TOM1L2Q6ZVM7 507 aa26.93■■□□□ 1.9
SPSB3-211ENST00000569380 PNNQ9H307 717 aaKnown RBP26.93■■□□□ 1.9
SPSB3-211ENST00000569380 NRAPQ86VF7 1730 aa26.93■■□□□ 1.9
SPSB3-211ENST00000569380 DLG5Q8TDM6 1919 aa26.92■■□□□ 1.9
SPSB3-211ENST00000569380 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.91■■□□□ 1.9
SPSB3-211ENST00000569380 UNC5CLQ8IV45 518 aa26.9■■□□□ 1.9
SPSB3-211ENST00000569380 MTHFSDQ2M296 383 aaKnown RBP26.89■■□□□ 1.9
SPSB3-211ENST00000569380 USP35Q9P2H5 1018 aa26.89■■□□□ 1.9
SPSB3-211ENST00000569380 MEGF6O75095 1541 aa26.89■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms