RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 BARGINQ6ZT62 677 aa13□□□□□ -0.33
UBR1-210ENST00000569337 THRAP3Q9Y2W1 955 aaKnown RBP13□□□□□ -0.33
UBR1-210ENST00000569337 ANKRD36BQ8N2N9 1353 aa12.99□□□□□ -0.33
UBR1-210ENST00000569337 TOM1L2Q6ZVM7 507 aa12.99□□□□□ -0.33
UBR1-210ENST00000569337 AKAP12Q02952 1782 aa12.99□□□□□ -0.33
UBR1-210ENST00000569337 COL5A2P05997 1499 aaPredicted RBP12.98□□□□□ -0.33
UBR1-210ENST00000569337 CSB-PGBD3P0DP91 1061 aa12.98□□□□□ -0.33
UBR1-210ENST00000569337 PDE3BQ13370 1112 aa12.98□□□□□ -0.33
UBR1-210ENST00000569337 COG3Q96JB2 828 aa12.98□□□□□ -0.33
UBR1-210ENST00000569337 CRB1P82279 1406 aa12.97□□□□□ -0.33
UBR1-210ENST00000569337 WDR17Q8IZU2 1322 aa12.97□□□□□ -0.33
UBR1-210ENST00000569337 FAM182BQ5T319 152 aa12.97□□□□□ -0.33
UBR1-210ENST00000569337 POLR3GLQ9BT43 218 aa12.97□□□□□ -0.33
UBR1-210ENST00000569337 BLMP54132 1417 aaPredicted RBP12.96□□□□□ -0.33
UBR1-210ENST00000569337 LMO7Q8WWI1 1683 aa12.96□□□□□ -0.33
UBR1-210ENST00000569337 MON2Q7Z3U7 1717 aa12.96□□□□□ -0.34
UBR1-210ENST00000569337 NFAT5O94916 1531 aa12.94□□□□□ -0.34
UBR1-210ENST00000569337 FYB1O15117 783 aa12.94□□□□□ -0.34
UBR1-210ENST00000569337 FAM196AQ6ZSG2 479 aa12.94□□□□□ -0.34
UBR1-210ENST00000569337 CARD10Q9BWT7 1032 aa12.94□□□□□ -0.34
UBR1-210ENST00000569337 GGNBP2Q9H3C7 697 aa12.94□□□□□ -0.34
UBR1-210ENST00000569337 OVOS2A0A0J9YW53 1432 aa12.94□□□□□ -0.34
UBR1-210ENST00000569337 OVOS2Q6IE36 1432 aa12.94□□□□□ -0.34
UBR1-210ENST00000569337 EP400Q96L91 3159 aa12.93□□□□□ -0.34
UBR1-210ENST00000569337 DEFB132Q7Z7B7 95 aa12.93□□□□□ -0.34
UBR1-210ENST00000569337 BAG6P46379 1132 aa12.92□□□□□ -0.34
UBR1-210ENST00000569337 DDB1Q16531 1140 aa12.92□□□□□ -0.34
UBR1-210ENST00000569337 ANKRD24Q8TF21 1146 aa12.92□□□□□ -0.34
UBR1-210ENST00000569337 IP6K1Q92551 441 aa12.92□□□□□ -0.34
UBR1-210ENST00000569337 CDCA7Q9BWT1 371 aaPredicted RBP12.92□□□□□ -0.34
UBR1-210ENST00000569337 CARD14Q9BXL6 1004 aa12.92□□□□□ -0.34
UBR1-210ENST00000569337 NLRP2Q9NX02 1062 aa12.92□□□□□ -0.34
UBR1-210ENST00000569337 THSD7AQ9UPZ6 1657 aa12.92□□□□□ -0.34
UBR1-210ENST00000569337 ERBB3P21860 1342 aa12.91□□□□□ -0.34
UBR1-210ENST00000569337 BRWD3Q6RI45 1802 aa12.91□□□□□ -0.34
UBR1-210ENST00000569337 FBLN1P23142 703 aa12.91□□□□□ -0.34
UBR1-210ENST00000569337 AMPHP49418 695 aa12.91□□□□□ -0.34
UBR1-210ENST00000569337 MAP3K19Q56UN5 1328 aa12.9□□□□□ -0.34
UBR1-210ENST00000569337 TRIM37O94972 964 aa12.9□□□□□ -0.34
UBR1-210ENST00000569337 DDX10Q13206 875 aaKnown RBP12.9□□□□□ -0.34
UBR1-210ENST00000569337 COL18A1P39060 1754 aa12.89□□□□□ -0.35
UBR1-210ENST00000569337 ABCC6O95255 1503 aa12.89□□□□□ -0.35
UBR1-210ENST00000569337 EXOC5O00471 708 aa12.89□□□□□ -0.35
UBR1-210ENST00000569337 LTV1Q96GA3 475 aaPredicted RBP12.89□□□□□ -0.35
UBR1-210ENST00000569337 PANK3Q9H999 370 aa12.89□□□□□ -0.35
UBR1-210ENST00000569337 NSD3Q9BZ95 1437 aa12.88□□□□□ -0.35
UBR1-210ENST00000569337 HOXC9P31274 260 aa12.88□□□□□ -0.35
UBR1-210ENST00000569337 RRS1Q15050 365 aaKnown RBP12.88□□□□□ -0.35
UBR1-210ENST00000569337 USP54Q70EL1 1684 aa12.88□□□□□ -0.35
UBR1-210ENST00000569337 CGNL1Q0VF96 1302 aa12.88□□□□□ -0.35
UBR1-210ENST00000569337 APBA3O96018 575 aa12.87□□□□□ -0.35
UBR1-210ENST00000569337 EN1Q05925 392 aaPredicted RBP12.87□□□□□ -0.35
UBR1-210ENST00000569337 IL2RBP14784 551 aa12.86□□□□□ -0.35
UBR1-210ENST00000569337 PER1O15534 1290 aaPredicted RBP12.85□□□□□ -0.35
UBR1-210ENST00000569337 MARCH10Q8NA82 808 aaPredicted RBP12.85□□□□□ -0.35
UBR1-210ENST00000569337 OVOS2A0A0G2JMS6 1433 aa12.85□□□□□ -0.35
UBR1-210ENST00000569337 EZH2Q15910 746 aaKnown RBP12.84□□□□□ -0.35
UBR1-210ENST00000569337 DISP2A7MBM2 1401 aa12.84□□□□□ -0.35
UBR1-210ENST00000569337 RTL1A6NKG5 1358 aa12.83□□□□□ -0.36
UBR1-210ENST00000569337 PPM1GO15355 546 aaPredicted RBP12.82□□□□□ -0.36
UBR1-210ENST00000569337 HSP90AB2PQ58FF8 381 aa12.82□□□□□ -0.36
UBR1-210ENST00000569337 CAMKK2Q96RR4 588 aa12.82□□□□□ -0.36
UBR1-210ENST00000569337 EMILIN1Q9Y6C2 1016 aa12.82□□□□□ -0.36
UBR1-210ENST00000569337 PARP4Q9UKK3 1724 aaKnown RBP12.82□□□□□ -0.36
UBR1-210ENST00000569337 KIF24Q5T7B8 1368 aa12.81□□□□□ -0.36
UBR1-210ENST00000569337 RGPD5Q99666 1765 aa12.81□□□□□ -0.36
UBR1-210ENST00000569337 SMG6Q86US8 1419 aaKnown RBP12.81□□□□□ -0.36
UBR1-210ENST00000569337 TNNT2P45379 298 aaPredicted RBP12.81□□□□□ -0.36
UBR1-210ENST00000569337 BCL11BQ9C0K0 894 aaPredicted RBP12.81□□□□□ -0.36
UBR1-210ENST00000569337 KNSTRNQ9Y448 316 aa12.81□□□□□ -0.36
UBR1-210ENST00000569337 KIF20BQ96Q89 1820 aa12.81□□□□□ -0.36
UBR1-210ENST00000569337 INSRP06213 1382 aa12.81□□□□□ -0.36
UBR1-210ENST00000569337 FLT4P35916 1363 aa12.81□□□□□ -0.36
UBR1-210ENST00000569337 TNS2Q63HR2 1409 aa12.8□□□□□ -0.36
UBR1-210ENST00000569337 LTN1O94822 1766 aa12.8□□□□□ -0.36
UBR1-210ENST00000569337 NBPF6Q5VWK0 638 aa12.8□□□□□ -0.36
UBR1-210ENST00000569337 NBPF4Q96M43 638 aa12.8□□□□□ -0.36
UBR1-210ENST00000569337 AMER1Q5JTC6 1135 aaPredicted RBP12.79□□□□□ -0.36
UBR1-210ENST00000569337 DDX54Q8TDD1 881 aaKnown RBP12.79□□□□□ -0.36
UBR1-210ENST00000569337 POLKQ9UBT6 870 aa12.79□□□□□ -0.36
UBR1-210ENST00000569337 LRRC37A3O60309 1634 aa12.79□□□□□ -0.36
UBR1-210ENST00000569337 PARD3Q8TEW0 1356 aa12.79□□□□□ -0.36
UBR1-210ENST00000569337 RGPD1P0DJD0 1748 aa12.79□□□□□ -0.36
UBR1-210ENST00000569337 BCL9O00512 1426 aa12.79□□□□□ -0.36
UBR1-210ENST00000569337 PLSCR1O15162 318 aa12.78□□□□□ -0.36
UBR1-210ENST00000569337 PTF1AQ7RTS3 328 aa12.78□□□□□ -0.36
UBR1-210ENST00000569337 MORC1Q86VD1 984 aa12.78□□□□□ -0.36
UBR1-210ENST00000569337 USHBP1Q8N6Y0 703 aa12.78□□□□□ -0.36
UBR1-210ENST00000569337 RAPGEF4Q8WZA2 1011 aa12.78□□□□□ -0.36
UBR1-210ENST00000569337 ANKRD26Q9UPS8 1709 aa12.77□□□□□ -0.36
UBR1-210ENST00000569337 PSDA5PKW4 1024 aaPredicted RBP12.77□□□□□ -0.37
UBR1-210ENST00000569337 ZCRB1Q8TBF4 217 aaKnown RBP12.77□□□□□ -0.37
UBR1-210ENST00000569337 ACSBG1Q96GR2 724 aa12.77□□□□□ -0.37
UBR1-210ENST00000569337 NSD2O96028 1365 aa12.77□□□□□ -0.37
UBR1-210ENST00000569337 KCNQ2O43526 872 aa12.76□□□□□ -0.37
UBR1-210ENST00000569337 TATP17735 454 aaPredicted RBP12.76□□□□□ -0.37
UBR1-210ENST00000569337 R3HDM1Q15032 1099 aaKnown RBP12.76□□□□□ -0.37
UBR1-210ENST00000569337 NBPF14Q5TI25 921 aa12.76□□□□□ -0.37
UBR1-210ENST00000569337 CNGB1Q14028 1251 aaPredicted RBP12.75□□□□□ -0.37
UBR1-210ENST00000569337 CC2D1BQ5T0F9 858 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms