RNA–Protein interactions for RNA: ENST00000569335.1

HERC2-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-211ENST00000569335 SLC24A3Q9HC58 644 aa9.1□□□□□ -0.95
HERC2-211ENST00000569335 CNTLNQ9NXG0 1405 aa9.1□□□□□ -0.95
HERC2-211ENST00000569335 KDM5CP41229 1560 aa9.1□□□□□ -0.95
HERC2-211ENST00000569335 GPRASP1Q5JY77 1395 aa9.1□□□□□ -0.95
HERC2-211ENST00000569335 CCDC7Q96M83 1385 aa9.1□□□□□ -0.95
HERC2-211ENST00000569335 CFAP74Q9C0B2 1584 aa9.09□□□□□ -0.95
HERC2-211ENST00000569335 PTPRTO14522 1441 aa9.09□□□□□ -0.95
HERC2-211ENST00000569335 ASXL2Q76L83 1435 aa9.09□□□□□ -0.95
HERC2-211ENST00000569335 CLCN1P35523 988 aa9.09□□□□□ -0.95
HERC2-211ENST00000569335 KCNC4Q03721 635 aa9.09□□□□□ -0.95
HERC2-211ENST00000569335 TJAP1Q5JTD0 557 aa9.09□□□□□ -0.95
HERC2-211ENST00000569335 SULF1Q8IWU6 871 aa9.09□□□□□ -0.95
HERC2-211ENST00000569335 MTRQ99707 1265 aa9.09□□□□□ -0.95
HERC2-211ENST00000569335 REPIN1Q9BWE0 567 aaKnown RBP9.09□□□□□ -0.95
HERC2-211ENST00000569335 PRR14Q9BWN1 585 aa9.09□□□□□ -0.95
HERC2-211ENST00000569335 GPCPD1Q9NPB8 672 aa9.09□□□□□ -0.95
HERC2-211ENST00000569335 FANCAO15360 1455 aa9.08□□□□□ -0.96
HERC2-211ENST00000569335 TRIM66O15016 1216 aa9.08□□□□□ -0.96
HERC2-211ENST00000569335 KMT5BQ4FZB7 885 aa9.08□□□□□ -0.96
HERC2-211ENST00000569335 TMUB1Q9BVT8 246 aa9.08□□□□□ -0.96
HERC2-211ENST00000569335 RIMBP3CA6NJZ7 1639 aa9.08□□□□□ -0.96
HERC2-211ENST00000569335 RIMBP3BA6NNM3 1639 aa9.08□□□□□ -0.96
HERC2-211ENST00000569335 RIMBP3Q9UFD9 1639 aa9.08□□□□□ -0.96
HERC2-211ENST00000569335 CCDC144AA2RUR9 1427 aa9.07□□□□□ -0.96
HERC2-211ENST00000569335 PRDM15P57071 1507 aaPredicted RBP9.07□□□□□ -0.96
HERC2-211ENST00000569335 ATP7AQ04656 1500 aa9.07□□□□□ -0.96
HERC2-211ENST00000569335 ACTN4O43707 911 aaKnown RBP9.07□□□□□ -0.96
HERC2-211ENST00000569335 COPS2P61201 443 aa9.07□□□□□ -0.96
HERC2-211ENST00000569335 AMHR2Q16671 573 aa9.07□□□□□ -0.96
HERC2-211ENST00000569335 PCDHB3Q9Y5E6 796 aa9.07□□□□□ -0.96
HERC2-211ENST00000569335 BCORL1Q5H9F3 1711 aa9.07□□□□□ -0.96
HERC2-211ENST00000569335 ROCK2O75116 1388 aaKnown RBP9.07□□□□□ -0.96
HERC2-211ENST00000569335 PRAG1Q86YV5 1406 aa9.06□□□□□ -0.96
HERC2-211ENST00000569335 LMTK2Q8IWU2 1503 aa9.06□□□□□ -0.96
HERC2-211ENST00000569335 TTLL12Q14166 644 aaPredicted RBP9.06□□□□□ -0.96
HERC2-211ENST00000569335 ZNF516Q92618 1163 aa9.06□□□□□ -0.96
HERC2-211ENST00000569335 GTF3C3Q9Y5Q9 886 aa9.06□□□□□ -0.96
HERC2-211ENST00000569335 TET3O43151 1660 aa9.06□□□□□ -0.96
HERC2-211ENST00000569335 SPAG9O60271 1321 aaKnown RBP9.05□□□□□ -0.96
HERC2-211ENST00000569335 TRPM2O94759 1503 aa9.05□□□□□ -0.96
HERC2-211ENST00000569335 ADGRL1O94910 1474 aa9.05□□□□□ -0.96
HERC2-211ENST00000569335 ZNF518AQ6AHZ1 1483 aa9.05□□□□□ -0.96
HERC2-211ENST00000569335 MLH3Q9UHC1 1453 aa9.05□□□□□ -0.96
HERC2-211ENST00000569335 DHX29Q7Z478 1369 aaKnown RBP9.05□□□□□ -0.96
HERC2-211ENST00000569335 USP47Q96K76 1375 aa9.05□□□□□ -0.96
HERC2-211ENST00000569335 GCGRP47871 477 aa9.05□□□□□ -0.96
HERC2-211ENST00000569335 IL21Q9HBE4 155 aa9.05□□□□□ -0.96
HERC2-211ENST00000569335 FAM217BQ9NTX9 383 aaPredicted RBP9.05□□□□□ -0.96
HERC2-211ENST00000569335 TRPM1Q7Z4N2 1603 aa9.05□□□□□ -0.96
HERC2-211ENST00000569335 A2MP01023 1474 aa9.04□□□□□ -0.96
HERC2-211ENST00000569335 NEO1Q92859 1461 aa9.04□□□□□ -0.96
HERC2-211ENST00000569335 CD46P15529 392 aa9.04□□□□□ -0.96
HERC2-211ENST00000569335 BLOC1S3Q6QNY0 202 aa9.04□□□□□ -0.96
HERC2-211ENST00000569335 RNF17Q9BXT8 1623 aaKnown RBP9.04□□□□□ -0.96
HERC2-211ENST00000569335 KIF7Q2M1P5 1343 aa9.04□□□□□ -0.96
HERC2-211ENST00000569335 MROH1Q8NDA8 1641 aa9.03□□□□□ -0.96
HERC2-211ENST00000569335 YTHDC1Q96MU7 727 aaKnown RBP9.03□□□□□ -0.96
HERC2-211ENST00000569335 SCAPERQ9BY12 1400 aa9.03□□□□□ -0.96
HERC2-211ENST00000569335 E9PCH4 1651 aa9.03□□□□□ -0.96
HERC2-211ENST00000569335 KTN1Q86UP2 1357 aaKnown RBP9.02□□□□□ -0.97
HERC2-211ENST00000569335 KIDINS220Q9ULH0 1771 aa9.02□□□□□ -0.97
HERC2-211ENST00000569335 C11orf95C9JLR9 678 aaPredicted RBP9.02□□□□□ -0.97
HERC2-211ENST00000569335 SSTR3P32745 418 aaPredicted RBP9.02□□□□□ -0.97
HERC2-211ENST00000569335 FUT2Q10981 343 aa9.02□□□□□ -0.97
HERC2-211ENST00000569335 PUS10Q3MIT2 529 aaKnown RBP9.02□□□□□ -0.97
HERC2-211ENST00000569335 GIGYF2Q6Y7W6 1299 aaKnown RBP9.02□□□□□ -0.97
HERC2-211ENST00000569335 PARP9Q8IXQ6 854 aa9.02□□□□□ -0.97
HERC2-211ENST00000569335 HIRIP3Q9BW71 556 aaPredicted RBP9.02□□□□□ -0.97
HERC2-211ENST00000569335 POGZQ7Z3K3 1410 aa9.02□□□□□ -0.97
HERC2-211ENST00000569335 GLI2P10070 1586 aa9.02□□□□□ -0.97
HERC2-211ENST00000569335 CEP152O94986 1710 aa9□□□□□ -0.97
HERC2-211ENST00000569335 SPHKAPQ2M3C7 1700 aa9□□□□□ -0.97
HERC2-211ENST00000569335 CD109Q6YHK3 1445 aa9□□□□□ -0.97
HERC2-211ENST00000569335 ZPR1O75312 459 aa9□□□□□ -0.97
HERC2-211ENST00000569335 PDE4DQ08499 809 aa9□□□□□ -0.97
HERC2-211ENST00000569335 NKX2-3Q8TAU0 364 aa9□□□□□ -0.97
HERC2-211ENST00000569335 PRKRIP1Q9H875 184 aaPredicted RBP9□□□□□ -0.97
HERC2-211ENST00000569335 KANK1Q14678 1352 aa8.99□□□□□ -0.97
HERC2-211ENST00000569335 ATP6V1AP38606 617 aa8.99□□□□□ -0.97
HERC2-211ENST00000569335 SCUBE3Q8IX30 993 aa8.99□□□□□ -0.97
HERC2-211ENST00000569335 AFAP1Q8N556 730 aa8.99□□□□□ -0.97
HERC2-211ENST00000569335 KIAA1210Q9ULL0 1709 aa8.99□□□□□ -0.97
HERC2-211ENST00000569335 EFCAB6Q5THR3 1501 aa8.99□□□□□ -0.97
HERC2-211ENST00000569335 MYOM2P54296 1465 aa8.98□□□□□ -0.97
HERC2-211ENST00000569335 KDM4AO75164 1064 aa8.98□□□□□ -0.97
HERC2-211ENST00000569335 NR1I2O75469 434 aa8.98□□□□□ -0.97
HERC2-211ENST00000569335 DCAF11Q8TEB1 546 aa8.98□□□□□ -0.97
HERC2-211ENST00000569335 HECW2Q9P2P5 1572 aa8.98□□□□□ -0.97
HERC2-211ENST00000569335 MADDQ8WXG6 1647 aa8.98□□□□□ -0.97
HERC2-211ENST00000569335 TLL1O43897 1013 aa8.97□□□□□ -0.97
HERC2-211ENST00000569335 TPRNQ4KMQ1 711 aa8.97□□□□□ -0.97
HERC2-211ENST00000569335 MORN1Q5T089 497 aa8.97□□□□□ -0.97
HERC2-211ENST00000569335 CARD11Q9BXL7 1154 aa8.97□□□□□ -0.97
HERC2-211ENST00000569335 FRMPD1Q5SYB0 1578 aa8.97□□□□□ -0.97
HERC2-211ENST00000569335 WASHC2CQ9Y4E1 1318 aa8.97□□□□□ -0.97
HERC2-211ENST00000569335 MAP3K4Q9Y6R4 1608 aa8.97□□□□□ -0.97
HERC2-211ENST00000569335 COL17A1Q9UMD9 1497 aaPredicted RBP8.96□□□□□ -0.97
HERC2-211ENST00000569335 CLTCL1P53675 1640 aa8.96□□□□□ -0.98
HERC2-211ENST00000569335 MS4A1P11836 297 aa8.96□□□□□ -0.98
HERC2-211ENST00000569335 NRXN1Q9ULB1 1477 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms