RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 SF3B2Q13435 895 aaKnown RBP20.1■□□□□ 0.81
COMMD4-225ENST00000569245 BARGINQ6ZT62 677 aa20.1■□□□□ 0.81
COMMD4-225ENST00000569245 FAM182BQ5T319 152 aa20.09■□□□□ 0.81
COMMD4-225ENST00000569245 COG3Q96JB2 828 aa20.09■□□□□ 0.81
COMMD4-225ENST00000569245 THRAP3Q9Y2W1 955 aaKnown RBP20.09■□□□□ 0.81
COMMD4-225ENST00000569245 LMO7Q8WWI1 1683 aa20.08■□□□□ 0.81
COMMD4-225ENST00000569245 HSPA5P11021 654 aaKnown RBP20.08■□□□□ 0.81
COMMD4-225ENST00000569245 PDE3BQ13370 1112 aa20.07■□□□□ 0.8
COMMD4-225ENST00000569245 CRB1P82279 1406 aa20.07■□□□□ 0.8
COMMD4-225ENST00000569245 BLMP54132 1417 aaPredicted RBP20.06■□□□□ 0.8
COMMD4-225ENST00000569245 BRWD3Q6RI45 1802 aa20.06■□□□□ 0.8
COMMD4-225ENST00000569245 WDR17Q8IZU2 1322 aa20.05■□□□□ 0.8
COMMD4-225ENST00000569245 NFAT5O94916 1531 aa20.05■□□□□ 0.8
COMMD4-225ENST00000569245 GGNBP2Q9H3C7 697 aa20.02■□□□□ 0.8
COMMD4-225ENST00000569245 OVOS2A0A0J9YW53 1432 aa20.02■□□□□ 0.79
COMMD4-225ENST00000569245 OVOS2Q6IE36 1432 aa20.02■□□□□ 0.79
COMMD4-225ENST00000569245 THSD7AQ9UPZ6 1657 aa20.01■□□□□ 0.79
COMMD4-225ENST00000569245 FYB1O15117 783 aa20.01■□□□□ 0.79
COMMD4-225ENST00000569245 FAM196AQ6ZSG2 479 aa20.01■□□□□ 0.79
COMMD4-225ENST00000569245 DEFB132Q7Z7B7 95 aa20.01■□□□□ 0.79
COMMD4-225ENST00000569245 CARD10Q9BWT7 1032 aa20.01■□□□□ 0.79
COMMD4-225ENST00000569245 NLRP2Q9NX02 1062 aa20■□□□□ 0.79
COMMD4-225ENST00000569245 COL18A1P39060 1754 aa19.99■□□□□ 0.79
COMMD4-225ENST00000569245 AMPHP49418 695 aa19.99■□□□□ 0.79
COMMD4-225ENST00000569245 ANKRD24Q8TF21 1146 aa19.99■□□□□ 0.79
COMMD4-225ENST00000569245 CARD14Q9BXL6 1004 aa19.99■□□□□ 0.79
COMMD4-225ENST00000569245 FBLN1P23142 703 aa19.98■□□□□ 0.79
COMMD4-225ENST00000569245 DDB1Q16531 1140 aa19.98■□□□□ 0.79
COMMD4-225ENST00000569245 LTV1Q96GA3 475 aaPredicted RBP19.98■□□□□ 0.79
COMMD4-225ENST00000569245 CDCA7Q9BWT1 371 aaPredicted RBP19.98■□□□□ 0.79
COMMD4-225ENST00000569245 TRIM37O94972 964 aa19.97■□□□□ 0.79
COMMD4-225ENST00000569245 BAG6P46379 1132 aa19.97■□□□□ 0.79
COMMD4-225ENST00000569245 IP6K1Q92551 441 aa19.97■□□□□ 0.79
COMMD4-225ENST00000569245 ERBB3P21860 1342 aa19.97■□□□□ 0.79
COMMD4-225ENST00000569245 USP54Q70EL1 1684 aa19.96■□□□□ 0.79
COMMD4-225ENST00000569245 MAP3K19Q56UN5 1328 aa19.96■□□□□ 0.79
COMMD4-225ENST00000569245 ABCC6O95255 1503 aa19.96■□□□□ 0.79
COMMD4-225ENST00000569245 NSD3Q9BZ95 1437 aa19.95■□□□□ 0.78
COMMD4-225ENST00000569245 CCDC7Q96M83 1385 aa19.95■□□□□ 0.78
COMMD4-225ENST00000569245 RRS1Q15050 365 aaKnown RBP19.94■□□□□ 0.78
COMMD4-225ENST00000569245 EXOC5O00471 708 aa19.93■□□□□ 0.78
COMMD4-225ENST00000569245 HOXC9P31274 260 aa19.93■□□□□ 0.78
COMMD4-225ENST00000569245 CGNL1Q0VF96 1302 aa19.93■□□□□ 0.78
COMMD4-225ENST00000569245 RGPD5Q99666 1765 aa19.91■□□□□ 0.78
COMMD4-225ENST00000569245 C11orf95C9JLR9 678 aaPredicted RBP19.91■□□□□ 0.78
COMMD4-225ENST00000569245 APBA3O96018 575 aa19.91■□□□□ 0.78
COMMD4-225ENST00000569245 EN1Q05925 392 aaPredicted RBP19.91■□□□□ 0.78
COMMD4-225ENST00000569245 PANK3Q9H999 370 aa19.91■□□□□ 0.78
COMMD4-225ENST00000569245 ZNF316A6NFI3 1004 aaPredicted RBP19.9■□□□□ 0.78
COMMD4-225ENST00000569245 LTN1O94822 1766 aa19.9■□□□□ 0.78
COMMD4-225ENST00000569245 IL2RBP14784 551 aa19.89■□□□□ 0.77
COMMD4-225ENST00000569245 MYOM1P52179 1685 aa19.89■□□□□ 0.77
COMMD4-225ENST00000569245 OVOS2A0A0G2JMS6 1433 aa19.88■□□□□ 0.77
COMMD4-225ENST00000569245 MARCH10Q8NA82 808 aaPredicted RBP19.88■□□□□ 0.77
COMMD4-225ENST00000569245 PPM1GO15355 546 aaPredicted RBP19.87■□□□□ 0.77
COMMD4-225ENST00000569245 PARP4Q9UKK3 1724 aaKnown RBP19.87■□□□□ 0.77
COMMD4-225ENST00000569245 DISP2A7MBM2 1401 aa19.86■□□□□ 0.77
COMMD4-225ENST00000569245 RTL1A6NKG5 1358 aa19.86■□□□□ 0.77
COMMD4-225ENST00000569245 EZH2Q15910 746 aaKnown RBP19.85■□□□□ 0.77
COMMD4-225ENST00000569245 HSP90AB2PQ58FF8 381 aa19.85■□□□□ 0.77
COMMD4-225ENST00000569245 TNNT2P45379 298 aaPredicted RBP19.84■□□□□ 0.77
COMMD4-225ENST00000569245 RGPD1P0DJD0 1748 aa19.84■□□□□ 0.77
COMMD4-225ENST00000569245 SMG6Q86US8 1419 aaKnown RBP19.84■□□□□ 0.77
COMMD4-225ENST00000569245 LRRC37A3O60309 1634 aa19.84■□□□□ 0.77
COMMD4-225ENST00000569245 EMILIN1Q9Y6C2 1016 aa19.83■□□□□ 0.77
COMMD4-225ENST00000569245 KIF7Q2M1P5 1343 aa19.82■□□□□ 0.76
COMMD4-225ENST00000569245 KIF20BQ96Q89 1820 aa19.82■□□□□ 0.76
COMMD4-225ENST00000569245 CAMKK2Q96RR4 588 aa19.82■□□□□ 0.76
COMMD4-225ENST00000569245 FLT4P35916 1363 aa19.82■□□□□ 0.76
COMMD4-225ENST00000569245 NBPF6Q5VWK0 638 aa19.81■□□□□ 0.76
COMMD4-225ENST00000569245 NBPF4Q96M43 638 aa19.81■□□□□ 0.76
COMMD4-225ENST00000569245 BCL11BQ9C0K0 894 aaPredicted RBP19.81■□□□□ 0.76
COMMD4-225ENST00000569245 KNSTRNQ9Y448 316 aa19.81■□□□□ 0.76
COMMD4-225ENST00000569245 TNS2Q63HR2 1409 aa19.81■□□□□ 0.76
COMMD4-225ENST00000569245 USHBP1Q8N6Y0 703 aa19.8■□□□□ 0.76
COMMD4-225ENST00000569245 DDX54Q8TDD1 881 aaKnown RBP19.8■□□□□ 0.76
COMMD4-225ENST00000569245 INSRP06213 1382 aa19.8■□□□□ 0.76
COMMD4-225ENST00000569245 KIF24Q5T7B8 1368 aa19.8■□□□□ 0.76
COMMD4-225ENST00000569245 SRCAPQ6ZRS2 3230 aa19.8■□□□□ 0.76
COMMD4-225ENST00000569245 PSDA5PKW4 1024 aaPredicted RBP19.78■□□□□ 0.76
COMMD4-225ENST00000569245 PTF1AQ7RTS3 328 aa19.78■□□□□ 0.76
COMMD4-225ENST00000569245 MORC1Q86VD1 984 aa19.78■□□□□ 0.76
COMMD4-225ENST00000569245 PARD3Q8TEW0 1356 aa19.78■□□□□ 0.76
COMMD4-225ENST00000569245 WNK3Q9BYP7 1800 aa19.77■□□□□ 0.76
COMMD4-225ENST00000569245 RAPGEF4Q8WZA2 1011 aa19.77■□□□□ 0.76
COMMD4-225ENST00000569245 ACSBG1Q96GR2 724 aa19.77■□□□□ 0.76
COMMD4-225ENST00000569245 POLKQ9UBT6 870 aa19.77■□□□□ 0.76
COMMD4-225ENST00000569245 TNS1Q9HBL0 1735 aaKnown RBP19.76■□□□□ 0.75
COMMD4-225ENST00000569245 BCL9O00512 1426 aa19.76■□□□□ 0.75
COMMD4-225ENST00000569245 NSD2O96028 1365 aa19.75■□□□□ 0.75
COMMD4-225ENST00000569245 KCNQ2O43526 872 aa19.75■□□□□ 0.75
COMMD4-225ENST00000569245 ZCRB1Q8TBF4 217 aaKnown RBP19.75■□□□□ 0.75
COMMD4-225ENST00000569245 PEAK1Q9H792 1746 aa19.75■□□□□ 0.75
COMMD4-225ENST00000569245 WASHC2AQ641Q2 1341 aa19.75■□□□□ 0.75
COMMD4-225ENST00000569245 TATP17735 454 aaPredicted RBP19.74■□□□□ 0.75
COMMD4-225ENST00000569245 R3HDM1Q15032 1099 aaKnown RBP19.74■□□□□ 0.75
COMMD4-225ENST00000569245 NBPF14Q5TI25 921 aa19.74■□□□□ 0.75
COMMD4-225ENST00000569245 FAM208AQ9UK61 1670 aaKnown RBP19.74■□□□□ 0.75
COMMD4-225ENST00000569245 PLSCR1O15162 318 aa19.73■□□□□ 0.75
COMMD4-225ENST00000569245 MEGF6O75095 1541 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms