RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 GGNBP2Q9H3C7 697 aa14.22□□□□□ -0.13
CDH3-210ENST00000569117 LTN1O94822 1766 aa14.22□□□□□ -0.13
CDH3-210ENST00000569117 CC2D1BQ5T0F9 858 aaKnown RBP14.21□□□□□ -0.13
CDH3-210ENST00000569117 ABTB2Q8N961 1025 aa14.21□□□□□ -0.13
CDH3-210ENST00000569117 COG3Q96JB2 828 aa14.2□□□□□ -0.14
CDH3-210ENST00000569117 PRKRIP1Q9H875 184 aaPredicted RBP14.2□□□□□ -0.14
CDH3-210ENST00000569117 SMG6Q86US8 1419 aaKnown RBP14.2□□□□□ -0.14
CDH3-210ENST00000569117 PNPLA6Q8IY17 1366 aa14.2□□□□□ -0.14
CDH3-210ENST00000569117 ANP32CO43423 234 aa14.19□□□□□ -0.14
CDH3-210ENST00000569117 NLRP6P59044 892 aa14.19□□□□□ -0.14
CDH3-210ENST00000569117 RALBP1Q15311 655 aa14.19□□□□□ -0.14
CDH3-210ENST00000569117 LRRC59Q96AG4 307 aaKnown RBP14.19□□□□□ -0.14
CDH3-210ENST00000569117 ZRANB1Q9UGI0 708 aa14.19□□□□□ -0.14
CDH3-210ENST00000569117 MAP2P11137 1827 aaKnown RBP14.19□□□□□ -0.14
CDH3-210ENST00000569117 AATKQ6ZMQ8 1374 aa14.19□□□□□ -0.14
CDH3-210ENST00000569117 MORC1Q86VD1 984 aa14.18□□□□□ -0.14
CDH3-210ENST00000569117 NLRP13Q86W25 1043 aa14.18□□□□□ -0.14
CDH3-210ENST00000569117 ABCC6O95255 1503 aa14.18□□□□□ -0.14
CDH3-210ENST00000569117 PEAK1Q9H792 1746 aa14.17□□□□□ -0.14
CDH3-210ENST00000569117 NUTM2GQ5VZR2 741 aa14.16□□□□□ -0.14
CDH3-210ENST00000569117 LMOD2Q6P5Q4 547 aa14.16□□□□□ -0.14
CDH3-210ENST00000569117 JCADQ9P266 1359 aa14.16□□□□□ -0.14
CDH3-210ENST00000569117 CDK12Q9NYV4 1490 aaPredicted RBP14.16□□□□□ -0.14
CDH3-210ENST00000569117 MYBBP1AQ9BQG0 1328 aaKnown RBP14.15□□□□□ -0.14
CDH3-210ENST00000569117 CNGB1Q14028 1251 aaPredicted RBP14.15□□□□□ -0.14
CDH3-210ENST00000569117 KCNH5Q8NCM2 988 aa14.14□□□□□ -0.15
CDH3-210ENST00000569117 LMO7Q8WWI1 1683 aa14.14□□□□□ -0.15
CDH3-210ENST00000569117 RTL1A6NKG5 1358 aa14.13□□□□□ -0.15
CDH3-210ENST00000569117 KIF24Q5T7B8 1368 aa14.13□□□□□ -0.15
CDH3-210ENST00000569117 PLEKHG5O94827 1062 aa14.13□□□□□ -0.15
CDH3-210ENST00000569117 PPP2R1AP30153 589 aa14.13□□□□□ -0.15
CDH3-210ENST00000569117 HSPA1LP34931 641 aa14.13□□□□□ -0.15
CDH3-210ENST00000569117 FBXO41Q8TF61 875 aa14.13□□□□□ -0.15
CDH3-210ENST00000569117 ZBTB47Q9UFB7 747 aaPredicted RBP14.13□□□□□ -0.15
CDH3-210ENST00000569117 COL18A1P39060 1754 aa14.13□□□□□ -0.15
CDH3-210ENST00000569117 CPDO75976 1380 aa14.12□□□□□ -0.15
CDH3-210ENST00000569117 GCP02774 474 aa14.12□□□□□ -0.15
CDH3-210ENST00000569117 COL3A1P02461 1466 aaPredicted RBP14.12□□□□□ -0.15
CDH3-210ENST00000569117 COL14A1Q05707 1796 aaKnown RBP14.11□□□□□ -0.15
CDH3-210ENST00000569117 PLCH1Q4KWH8 1693 aa14.11□□□□□ -0.15
CDH3-210ENST00000569117 TNNT2P45379 298 aaPredicted RBP14.11□□□□□ -0.15
CDH3-210ENST00000569117 NBR1Q14596 966 aa14.11□□□□□ -0.15
CDH3-210ENST00000569117 FAM208AQ9UK61 1670 aaKnown RBP14.1□□□□□ -0.15
CDH3-210ENST00000569117 FLT4P35916 1363 aa14.1□□□□□ -0.15
CDH3-210ENST00000569117 RGPD5Q99666 1765 aa14.1□□□□□ -0.15
CDH3-210ENST00000569117 CABLES1Q8TDN4 633 aa14.1□□□□□ -0.15
CDH3-210ENST00000569117 MAP3K19Q56UN5 1328 aa14.1□□□□□ -0.15
CDH3-210ENST00000569117 DSG3P32926 999 aa14.09□□□□□ -0.15
CDH3-210ENST00000569117 POLKQ9UBT6 870 aa14.09□□□□□ -0.15
CDH3-210ENST00000569117 NWD2Q9ULI1 1742 aa14.09□□□□□ -0.15
CDH3-210ENST00000569117 SPATA31A6Q5VVP1 1343 aa14.09□□□□□ -0.15
CDH3-210ENST00000569117 INSRP06213 1382 aa14.09□□□□□ -0.15
CDH3-210ENST00000569117 KIAA0232Q92628 1395 aa14.09□□□□□ -0.15
CDH3-210ENST00000569117 LRP6O75581 1613 aa14.08□□□□□ -0.15
CDH3-210ENST00000569117 BLMP54132 1417 aaPredicted RBP14.08□□□□□ -0.15
CDH3-210ENST00000569117 RGPD1P0DJD0 1748 aa14.08□□□□□ -0.16
CDH3-210ENST00000569117 SOX12O15370 315 aa14.08□□□□□ -0.16
CDH3-210ENST00000569117 RRS1Q15050 365 aaKnown RBP14.08□□□□□ -0.16
CDH3-210ENST00000569117 ARHGEF25Q86VW2 580 aa14.08□□□□□ -0.16
CDH3-210ENST00000569117 HS6ST3Q8IZP7 471 aa14.08□□□□□ -0.16
CDH3-210ENST00000569117 EMILIN1Q9Y6C2 1016 aa14.08□□□□□ -0.16
CDH3-210ENST00000569117 CAMTA1Q9Y6Y1 1673 aa14.07□□□□□ -0.16
CDH3-210ENST00000569117 NRAPQ86VF7 1730 aa14.07□□□□□ -0.16
CDH3-210ENST00000569117 CCER2I3L3R5 266 aa14.07□□□□□ -0.16
CDH3-210ENST00000569117 FBLN1P23142 703 aa14.07□□□□□ -0.16
CDH3-210ENST00000569117 MTHFSP49914 203 aa14.06□□□□□ -0.16
CDH3-210ENST00000569117 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.05□□□□□ -0.16
CDH3-210ENST00000569117 HOXC9P31274 260 aa14.04□□□□□ -0.16
CDH3-210ENST00000569117 ZC3H6P61129 1189 aaKnown RBP14.04□□□□□ -0.16
CDH3-210ENST00000569117 AMPHP49418 695 aa14.03□□□□□ -0.16
CDH3-210ENST00000569117 IP6K1Q92551 441 aa14.03□□□□□ -0.16
CDH3-210ENST00000569117 CFAP53Q96M91 514 aa14.03□□□□□ -0.16
CDH3-210ENST00000569117 PRDM11Q9NQV5 511 aa14.03□□□□□ -0.16
CDH3-210ENST00000569117 COL5A2P05997 1499 aaPredicted RBP14.03□□□□□ -0.16
CDH3-210ENST00000569117 RGPD2P0DJD1 1756 aa14.02□□□□□ -0.16
CDH3-210ENST00000569117 SLIT2O94813 1529 aa14.02□□□□□ -0.16
CDH3-210ENST00000569117 PPM1GO15355 546 aaPredicted RBP14.02□□□□□ -0.17
CDH3-210ENST00000569117 CCDC184Q52MB2 194 aa14.01□□□□□ -0.17
CDH3-210ENST00000569117 MRS2Q9HD23 443 aa14.01□□□□□ -0.17
CDH3-210ENST00000569117 NCAPD2Q15021 1401 aa14□□□□□ -0.17
CDH3-210ENST00000569117 ERBB3P21860 1342 aa14□□□□□ -0.17
CDH3-210ENST00000569117 ZBTB7CA1YPR0 619 aa14□□□□□ -0.17
CDH3-210ENST00000569117 NUTM2BA6NNL0 878 aaPredicted RBP14□□□□□ -0.17
CDH3-210ENST00000569117 NUTM2EB1AL46 878 aaPredicted RBP14□□□□□ -0.17
CDH3-210ENST00000569117 CHRNA2Q15822 529 aa14□□□□□ -0.17
CDH3-210ENST00000569117 HSP90AB2PQ58FF8 381 aa14□□□□□ -0.17
CDH3-210ENST00000569117 NUTM2AQ8IVF1 878 aaPredicted RBP14□□□□□ -0.17
CDH3-210ENST00000569117 WNK3Q9BYP7 1800 aa13.99□□□□□ -0.17
CDH3-210ENST00000569117 FAM83GA6ND36 823 aa13.98□□□□□ -0.17
CDH3-210ENST00000569117 DIAPH1O60610 1272 aaKnown RBP13.98□□□□□ -0.17
CDH3-210ENST00000569117 ADAMTS2O95450 1211 aa13.98□□□□□ -0.17
CDH3-210ENST00000569117 EIF4A2Q14240 407 aaKnown RBP13.98□□□□□ -0.17
CDH3-210ENST00000569117 AXIN2Q9Y2T1 843 aa13.98□□□□□ -0.17
CDH3-210ENST00000569117 IL13P35225 146 aa13.97□□□□□ -0.17
CDH3-210ENST00000569117 IGSF1Q8N6C5 1336 aa13.96□□□□□ -0.17
CDH3-210ENST00000569117 ANKRD24Q8TF21 1146 aa13.96□□□□□ -0.17
CDH3-210ENST00000569117 RNF25Q96BH1 459 aaPredicted RBP13.96□□□□□ -0.17
CDH3-210ENST00000569117 KDRP35968 1356 aa13.96□□□□□ -0.18
CDH3-210ENST00000569117 PARP4Q9UKK3 1724 aaKnown RBP13.95□□□□□ -0.18
CDH3-210ENST00000569117 WDR17Q8IZU2 1322 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms