RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 NUP188Q5SRE5 1749 aa19.45■□□□□ 0.7
CNOT1-215ENST00000569020 CPSF1Q10570 1443 aaKnown RBP19.45■□□□□ 0.7
CNOT1-215ENST00000569020 SBF2Q86WG5 1849 aa19.45■□□□□ 0.7
CNOT1-215ENST00000569020 KTN1Q86UP2 1357 aaKnown RBP19.44■□□□□ 0.7
CNOT1-215ENST00000569020 SBNO2Q9Y2G9 1366 aa19.44■□□□□ 0.7
CNOT1-215ENST00000569020 CARD11Q9BXL7 1154 aa19.44■□□□□ 0.7
CNOT1-215ENST00000569020 OVOS2A0A0G2JMS6 1433 aa19.43■□□□□ 0.7
CNOT1-215ENST00000569020 OVOS2A0A0J9YW53 1432 aa19.43■□□□□ 0.7
CNOT1-215ENST00000569020 OVOS2Q6IE36 1432 aa19.43■□□□□ 0.7
CNOT1-215ENST00000569020 PEAK1Q9H792 1746 aa19.43■□□□□ 0.7
CNOT1-215ENST00000569020 ARHGEF25Q86VW2 580 aa19.43■□□□□ 0.7
CNOT1-215ENST00000569020 WDR17Q8IZU2 1322 aa19.43■□□□□ 0.7
CNOT1-215ENST00000569020 SOX12O15370 315 aa19.42■□□□□ 0.7
CNOT1-215ENST00000569020 DDB1Q16531 1140 aa19.42■□□□□ 0.7
CNOT1-215ENST00000569020 AXIN2Q9Y2T1 843 aa19.42■□□□□ 0.7
CNOT1-215ENST00000569020 TONSLQ96HA7 1378 aa19.41■□□□□ 0.7
CNOT1-215ENST00000569020 RGPD3A6NKT7 1758 aaPredicted RBP19.4■□□□□ 0.7
CNOT1-215ENST00000569020 RGPD4Q7Z3J3 1758 aa19.4■□□□□ 0.7
CNOT1-215ENST00000569020 NBPF14Q5TI25 921 aa19.4■□□□□ 0.7
CNOT1-215ENST00000569020 CDCA7Q9BWT1 371 aaPredicted RBP19.4■□□□□ 0.7
CNOT1-215ENST00000569020 USP54Q70EL1 1684 aa19.4■□□□□ 0.7
CNOT1-215ENST00000569020 CSB-PGBD3P0DP91 1061 aa19.39■□□□□ 0.69
CNOT1-215ENST00000569020 NFAT5O94916 1531 aa19.39■□□□□ 0.69
CNOT1-215ENST00000569020 LTN1O94822 1766 aa19.38■□□□□ 0.69
CNOT1-215ENST00000569020 ABCC6O95255 1503 aa19.38■□□□□ 0.69
CNOT1-215ENST00000569020 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.37■□□□□ 0.69
CNOT1-215ENST00000569020 TMC1Q8TDI8 760 aa19.37■□□□□ 0.69
CNOT1-215ENST00000569020 HDGFL2Q7Z4V5 671 aaPredicted RBP19.36■□□□□ 0.69
CNOT1-215ENST00000569020 CARD10Q9BWT7 1032 aa19.36■□□□□ 0.69
CNOT1-215ENST00000569020 CD163L1Q9NR16 1453 aa19.35■□□□□ 0.69
CNOT1-215ENST00000569020 USP31Q70CQ4 1352 aa19.35■□□□□ 0.69
CNOT1-215ENST00000569020 CCDC7Q96M83 1385 aa19.34■□□□□ 0.69
CNOT1-215ENST00000569020 PLSCR1O15162 318 aa19.34■□□□□ 0.69
CNOT1-215ENST00000569020 EXOC5O00471 708 aa19.32■□□□□ 0.68
CNOT1-215ENST00000569020 NME9Q86XW9 330 aa19.32■□□□□ 0.68
CNOT1-215ENST00000569020 MARCH10Q8NA82 808 aaPredicted RBP19.32■□□□□ 0.68
CNOT1-215ENST00000569020 BCL11BQ9C0K0 894 aaPredicted RBP19.32■□□□□ 0.68
CNOT1-215ENST00000569020 SLC12A5Q9H2X9 1139 aa19.32■□□□□ 0.68
CNOT1-215ENST00000569020 TERF2IPQ9NYB0 399 aa19.32■□□□□ 0.68
CNOT1-215ENST00000569020 BCL9O00512 1426 aa19.32■□□□□ 0.68
CNOT1-215ENST00000569020 EDC4Q6P2E9 1401 aaKnown RBP19.32■□□□□ 0.68
CNOT1-215ENST00000569020 PUS7Q96PZ0 661 aaKnown RBP19.31■□□□□ 0.68
CNOT1-215ENST00000569020 A0A1W2PP64 1363 aa19.29■□□□□ 0.68
CNOT1-215ENST00000569020 ERBB3P21860 1342 aa19.28■□□□□ 0.68
CNOT1-215ENST00000569020 TNS2Q63HR2 1409 aa19.27■□□□□ 0.68
CNOT1-215ENST00000569020 SLC24A1O60721 1099 aa19.27■□□□□ 0.68
CNOT1-215ENST00000569020 NLRP2Q9NX02 1062 aa19.27■□□□□ 0.68
CNOT1-215ENST00000569020 PTF1AQ7RTS3 328 aa19.26■□□□□ 0.67
CNOT1-215ENST00000569020 SPON1Q9HCB6 807 aa19.26■□□□□ 0.67
CNOT1-215ENST00000569020 NINLQ9Y2I6 1382 aa19.26■□□□□ 0.67
CNOT1-215ENST00000569020 NHSQ6T4R5 1651 aa19.25■□□□□ 0.67
CNOT1-215ENST00000569020 FAM208AQ9UK61 1670 aaKnown RBP19.25■□□□□ 0.67
CNOT1-215ENST00000569020 ST20-MTHFSA0A0A6YYL1 179 aa19.24■□□□□ 0.67
CNOT1-215ENST00000569020 KCNQ2O43526 872 aa19.24■□□□□ 0.67
CNOT1-215ENST00000569020 IL2RBP14784 551 aa19.24■□□□□ 0.67
CNOT1-215ENST00000569020 ANKRD24Q8TF21 1146 aa19.24■□□□□ 0.67
CNOT1-215ENST00000569020 TESK2Q96S53 571 aa19.23■□□□□ 0.67
CNOT1-215ENST00000569020 PPP1R1BQ9UD71 204 aaPredicted RBP19.23■□□□□ 0.67
CNOT1-215ENST00000569020 CASZ1Q86V15 1759 aa19.23■□□□□ 0.67
CNOT1-215ENST00000569020 KAT6BQ8WYB5 2073 aa19.22■□□□□ 0.67
CNOT1-215ENST00000569020 PROM2Q8N271 834 aa19.21■□□□□ 0.67
CNOT1-215ENST00000569020 ANO8Q9HCE9 1232 aaPredicted RBP19.21■□□□□ 0.67
CNOT1-215ENST00000569020 TRIM26Q12899 539 aaPredicted RBP19.2■□□□□ 0.66
CNOT1-215ENST00000569020 TXNRD1Q16881 649 aa19.2■□□□□ 0.66
CNOT1-215ENST00000569020 BTAF1O14981 1849 aa19.19■□□□□ 0.66
CNOT1-215ENST00000569020 ADRA2BP18089 450 aa19.19■□□□□ 0.66
CNOT1-215ENST00000569020 IP6K1Q92551 441 aa19.19■□□□□ 0.66
CNOT1-215ENST00000569020 COG3Q96JB2 828 aa19.19■□□□□ 0.66
CNOT1-215ENST00000569020 ACSBG1Q96GR2 724 aa19.18■□□□□ 0.66
CNOT1-215ENST00000569020 STK32BQ9NY57 414 aa19.18■□□□□ 0.66
CNOT1-215ENST00000569020 ANKRD36BQ8N2N9 1353 aa19.17■□□□□ 0.66
CNOT1-215ENST00000569020 RGPD2P0DJD1 1756 aa19.16■□□□□ 0.66
CNOT1-215ENST00000569020 TMF1P82094 1093 aa19.15■□□□□ 0.66
CNOT1-215ENST00000569020 SLC15A2Q16348 729 aa19.15■□□□□ 0.66
CNOT1-215ENST00000569020 LTV1Q96GA3 475 aaPredicted RBP19.15■□□□□ 0.66
CNOT1-215ENST00000569020 DCAF8L1A6NGE4 600 aa19.14■□□□□ 0.65
CNOT1-215ENST00000569020 AMPHP49418 695 aa19.14■□□□□ 0.65
CNOT1-215ENST00000569020 HOXC9P31274 260 aa19.13■□□□□ 0.65
CNOT1-215ENST00000569020 PDGFDQ9GZP0 370 aaPredicted RBP19.13■□□□□ 0.65
CNOT1-215ENST00000569020 MAP3K19Q56UN5 1328 aa19.13■□□□□ 0.65
CNOT1-215ENST00000569020 USP47Q96K76 1375 aa19.13■□□□□ 0.65
CNOT1-215ENST00000569020 KIF20BQ96Q89 1820 aa19.13■□□□□ 0.65
CNOT1-215ENST00000569020 ZBTB7AO95365 584 aa19.12■□□□□ 0.65
CNOT1-215ENST00000569020 DDX54Q8TDD1 881 aaKnown RBP19.11■□□□□ 0.65
CNOT1-215ENST00000569020 MYOM1P52179 1685 aa19.11■□□□□ 0.65
CNOT1-215ENST00000569020 PAPPAQ13219 1627 aa19.11■□□□□ 0.65
CNOT1-215ENST00000569020 FBLN1P23142 703 aa19.1■□□□□ 0.65
CNOT1-215ENST00000569020 CDCA8Q53HL2 280 aa19.1■□□□□ 0.65
CNOT1-215ENST00000569020 RTL1A6NKG5 1358 aa19.09■□□□□ 0.65
CNOT1-215ENST00000569020 DOT1LQ8TEK3 1739 aa19.09■□□□□ 0.65
CNOT1-215ENST00000569020 SHANK3Q9BYB0 1731 aa19.09■□□□□ 0.65
CNOT1-215ENST00000569020 ATF5Q9Y2D1 282 aaPredicted RBP19.09■□□□□ 0.65
CNOT1-215ENST00000569020 FYB1O15117 783 aa19.08■□□□□ 0.64
CNOT1-215ENST00000569020 GGNBP2Q9H3C7 697 aa19.08■□□□□ 0.64
CNOT1-215ENST00000569020 MTFR1LQ9H019 292 aa19.07■□□□□ 0.64
CNOT1-215ENST00000569020 YY1P25490 414 aa19.06■□□□□ 0.64
CNOT1-215ENST00000569020 PTGER2P43116 358 aa19.06■□□□□ 0.64
CNOT1-215ENST00000569020 RRS1Q15050 365 aaKnown RBP19.06■□□□□ 0.64
CNOT1-215ENST00000569020 SMG6Q86US8 1419 aaKnown RBP19.06■□□□□ 0.64
CNOT1-215ENST00000569020 QSER1Q2KHR3 1735 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms