RNA–Protein interactions for RNA: ENST00000568413.1

RPAP1-211, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 586 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-211ENST00000568413 SLIT3O75094 1523 aa12.14□□□□□ -0.47
RPAP1-211ENST00000568413 CPDO75976 1380 aa12.14□□□□□ -0.47
RPAP1-211ENST00000568413 NSD2O96028 1365 aa12.14□□□□□ -0.47
RPAP1-211ENST00000568413 OVOS2A0A0J9YW53 1432 aa12.13□□□□□ -0.47
RPAP1-211ENST00000568413 OVOS2Q6IE36 1432 aa12.13□□□□□ -0.47
RPAP1-211ENST00000568413 CHRNA2Q15822 529 aa12.13□□□□□ -0.47
RPAP1-211ENST00000568413 ARHGEF25Q86VW2 580 aa12.13□□□□□ -0.47
RPAP1-211ENST00000568413 KIAA0232Q92628 1395 aa12.13□□□□□ -0.47
RPAP1-211ENST00000568413 USP54Q70EL1 1684 aa12.13□□□□□ -0.47
RPAP1-211ENST00000568413 MORC1Q86VD1 984 aa12.12□□□□□ -0.47
RPAP1-211ENST00000568413 NPC1L1Q9UHC9 1359 aa12.12□□□□□ -0.47
RPAP1-211ENST00000568413 KIF20BQ96Q89 1820 aa12.11□□□□□ -0.47
RPAP1-211ENST00000568413 THSD7AQ9UPZ6 1657 aa12.11□□□□□ -0.47
RPAP1-211ENST00000568413 ZBTB7CA1YPR0 619 aa12.11□□□□□ -0.47
RPAP1-211ENST00000568413 CCDC125Q86Z20 511 aa12.11□□□□□ -0.47
RPAP1-211ENST00000568413 AATKQ6ZMQ8 1374 aa12.1□□□□□ -0.47
RPAP1-211ENST00000568413 ONECUT3O60422 494 aaPredicted RBP12.1□□□□□ -0.47
RPAP1-211ENST00000568413 CC2D1BQ5T0F9 858 aaKnown RBP12.1□□□□□ -0.47
RPAP1-211ENST00000568413 STRN4Q9NRL3 753 aa12.1□□□□□ -0.47
RPAP1-211ENST00000568413 FBLN1P23142 703 aa12.09□□□□□ -0.47
RPAP1-211ENST00000568413 EVA1CP58658 441 aa12.09□□□□□ -0.47
RPAP1-211ENST00000568413 SF3B2Q13435 895 aaKnown RBP12.09□□□□□ -0.47
RPAP1-211ENST00000568413 NFAT5O94916 1531 aa12.09□□□□□ -0.47
RPAP1-211ENST00000568413 SPATA31A5Q5VU36 1347 aa12.09□□□□□ -0.47
RPAP1-211ENST00000568413 SPATA31A7Q8IWB4 1347 aa12.09□□□□□ -0.47
RPAP1-211ENST00000568413 TNS1Q9HBL0 1735 aaKnown RBP12.08□□□□□ -0.47
RPAP1-211ENST00000568413 SRCAPQ6ZRS2 3230 aa12.08□□□□□ -0.48
RPAP1-211ENST00000568413 TNNT2P45379 298 aaPredicted RBP12.08□□□□□ -0.48
RPAP1-211ENST00000568413 AMPHP49418 695 aa12.08□□□□□ -0.48
RPAP1-211ENST00000568413 RRS1Q15050 365 aaKnown RBP12.08□□□□□ -0.48
RPAP1-211ENST00000568413 IP6K1Q92551 441 aa12.08□□□□□ -0.48
RPAP1-211ENST00000568413 RGPD1P0DJD0 1748 aa12.08□□□□□ -0.48
RPAP1-211ENST00000568413 MAP3K19Q56UN5 1328 aa12.08□□□□□ -0.48
RPAP1-211ENST00000568413 PSDA5PKW4 1024 aaPredicted RBP12.07□□□□□ -0.48
RPAP1-211ENST00000568413 USP35Q9P2H5 1018 aa12.07□□□□□ -0.48
RPAP1-211ENST00000568413 AXIN2Q9Y2T1 843 aa12.07□□□□□ -0.48
RPAP1-211ENST00000568413 ANKRD26Q9UPS8 1709 aa12.06□□□□□ -0.48
RPAP1-211ENST00000568413 CNGB1Q14028 1251 aaPredicted RBP12.06□□□□□ -0.48
RPAP1-211ENST00000568413 LMO7Q8WWI1 1683 aa12.06□□□□□ -0.48
RPAP1-211ENST00000568413 CAMTA1Q9Y6Y1 1673 aa12.06□□□□□ -0.48
RPAP1-211ENST00000568413 KIF24Q5T7B8 1368 aa12.05□□□□□ -0.48
RPAP1-211ENST00000568413 HOXC9P31274 260 aa12.05□□□□□ -0.48
RPAP1-211ENST00000568413 EN1Q05925 392 aaPredicted RBP12.05□□□□□ -0.48
RPAP1-211ENST00000568413 POLKQ9UBT6 870 aa12.05□□□□□ -0.48
RPAP1-211ENST00000568413 SPATA31A1Q5TZJ5 1347 aa12.05□□□□□ -0.48
RPAP1-211ENST00000568413 PPM1GO15355 546 aaPredicted RBP12.04□□□□□ -0.48
RPAP1-211ENST00000568413 BAG6P46379 1132 aa12.04□□□□□ -0.48
RPAP1-211ENST00000568413 EMILIN1Q9Y6C2 1016 aa12.04□□□□□ -0.48
RPAP1-211ENST00000568413 ABCC6O95255 1503 aa12.04□□□□□ -0.48
RPAP1-211ENST00000568413 COL18A1P39060 1754 aa12.04□□□□□ -0.48
RPAP1-211ENST00000568413 MAP2P11137 1827 aaKnown RBP12.04□□□□□ -0.48
RPAP1-211ENST00000568413 RTL1A6NKG5 1358 aa12.04□□□□□ -0.48
RPAP1-211ENST00000568413 LTN1O94822 1766 aa12.03□□□□□ -0.48
RPAP1-211ENST00000568413 CSB-PGBD3P0DP91 1061 aa12.03□□□□□ -0.48
RPAP1-211ENST00000568413 RALBP1Q15311 655 aa12.03□□□□□ -0.48
RPAP1-211ENST00000568413 ANKRD24Q8TF21 1146 aa12.03□□□□□ -0.48
RPAP1-211ENST00000568413 FLT4P35916 1363 aa12.03□□□□□ -0.48
RPAP1-211ENST00000568413 HSP90AB2PQ58FF8 381 aa12.02□□□□□ -0.49
RPAP1-211ENST00000568413 LARP1Q6PKG0 1096 aaKnown RBP12.02□□□□□ -0.49
RPAP1-211ENST00000568413 TOM1L2Q6ZVM7 507 aa12.02□□□□□ -0.49
RPAP1-211ENST00000568413 WDR17Q8IZU2 1322 aa12.02□□□□□ -0.49
RPAP1-211ENST00000568413 INSRP06213 1382 aa12.02□□□□□ -0.49
RPAP1-211ENST00000568413 COL5A2P05997 1499 aaPredicted RBP12.02□□□□□ -0.49
RPAP1-211ENST00000568413 LRP5O75197 1615 aa12.01□□□□□ -0.49
RPAP1-211ENST00000568413 TRIM37O94972 964 aa12.01□□□□□ -0.49
RPAP1-211ENST00000568413 MTHFSP49914 203 aa12.01□□□□□ -0.49
RPAP1-211ENST00000568413 LTV1Q96GA3 475 aaPredicted RBP12.01□□□□□ -0.49
RPAP1-211ENST00000568413 ERBB3P21860 1342 aa12.01□□□□□ -0.49
RPAP1-211ENST00000568413 RGPD5Q99666 1765 aa12□□□□□ -0.49
RPAP1-211ENST00000568413 EZH2Q15910 746 aaKnown RBP12□□□□□ -0.49
RPAP1-211ENST00000568413 CARD10Q9BWT7 1032 aa12□□□□□ -0.49
RPAP1-211ENST00000568413 NLRP2Q9NX02 1062 aa12□□□□□ -0.49
RPAP1-211ENST00000568413 THRAP3Q9Y2W1 955 aaKnown RBP12□□□□□ -0.49
RPAP1-211ENST00000568413 PPP2R1AP30153 589 aa11.99□□□□□ -0.49
RPAP1-211ENST00000568413 TCP11L2Q8N4U5 519 aa11.99□□□□□ -0.49
RPAP1-211ENST00000568413 PARD3Q8TEW0 1356 aa11.99□□□□□ -0.49
RPAP1-211ENST00000568413 CRB1P82279 1406 aa11.99□□□□□ -0.49
RPAP1-211ENST00000568413 SMG6Q86US8 1419 aaKnown RBP11.99□□□□□ -0.49
RPAP1-211ENST00000568413 R3HDM1Q15032 1099 aaKnown RBP11.98□□□□□ -0.49
RPAP1-211ENST00000568413 BARGINQ6ZT62 677 aa11.98□□□□□ -0.49
RPAP1-211ENST00000568413 CFAP53Q96M91 514 aa11.98□□□□□ -0.49
RPAP1-211ENST00000568413 WNK3Q9BYP7 1800 aa11.97□□□□□ -0.49
RPAP1-211ENST00000568413 NUP188Q5SRE5 1749 aa11.97□□□□□ -0.49
RPAP1-211ENST00000568413 PARP4Q9UKK3 1724 aaKnown RBP11.97□□□□□ -0.49
RPAP1-211ENST00000568413 RREB1Q92766 1687 aa11.97□□□□□ -0.49
RPAP1-211ENST00000568413 DISP2A7MBM2 1401 aa11.97□□□□□ -0.49
RPAP1-211ENST00000568413 PRKRIP1Q9H875 184 aaPredicted RBP11.97□□□□□ -0.49
RPAP1-211ENST00000568413 PEAK1Q9H792 1746 aa11.97□□□□□ -0.49
RPAP1-211ENST00000568413 LRRC37A3O60309 1634 aa11.97□□□□□ -0.49
RPAP1-211ENST00000568413 ANP32CO43423 234 aa11.96□□□□□ -0.49
RPAP1-211ENST00000568413 EIF4A2Q14240 407 aaKnown RBP11.96□□□□□ -0.49
RPAP1-211ENST00000568413 NBPF6Q5VWK0 638 aa11.96□□□□□ -0.49
RPAP1-211ENST00000568413 FAM196AQ6ZSG2 479 aa11.96□□□□□ -0.49
RPAP1-211ENST00000568413 NBPF4Q96M43 638 aa11.96□□□□□ -0.49
RPAP1-211ENST00000568413 CDCA7Q9BWT1 371 aaPredicted RBP11.96□□□□□ -0.49
RPAP1-211ENST00000568413 MYBBP1AQ9BQG0 1328 aaKnown RBP11.95□□□□□ -0.5
RPAP1-211ENST00000568413 DIAPH1O60610 1272 aaKnown RBP11.95□□□□□ -0.5
RPAP1-211ENST00000568413 APBA3O96018 575 aa11.95□□□□□ -0.5
RPAP1-211ENST00000568413 PDE3BQ13370 1112 aa11.95□□□□□ -0.5
RPAP1-211ENST00000568413 CAMKK2Q96RR4 588 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms