RNA–Protein interactions for RNA: ENST00000568190.1

SIN3A-209, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 4

Gene SIN3A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-209ENST00000568190 ZC3H6P61129 1189 aaKnown RBP11.35□□□□□ -0.59
SIN3A-209ENST00000568190 UNC5CLQ8IV45 518 aa11.35□□□□□ -0.59
SIN3A-209ENST00000568190 CDK12Q9NYV4 1490 aaPredicted RBP11.35□□□□□ -0.59
SIN3A-209ENST00000568190 GLI3P10071 1580 aa11.35□□□□□ -0.59
SIN3A-209ENST00000568190 EP400Q96L91 3159 aa11.34□□□□□ -0.59
SIN3A-209ENST00000568190 USP21Q9UK80 565 aa11.34□□□□□ -0.59
SIN3A-209ENST00000568190 PLEKHG5O94827 1062 aa11.33□□□□□ -0.6
SIN3A-209ENST00000568190 BTG4Q9NY30 223 aa11.33□□□□□ -0.6
SIN3A-209ENST00000568190 THSD7AQ9UPZ6 1657 aa11.33□□□□□ -0.6
SIN3A-209ENST00000568190 MAP3K19Q56UN5 1328 aa11.33□□□□□ -0.6
SIN3A-209ENST00000568190 FLT4P35916 1363 aa11.32□□□□□ -0.6
SIN3A-209ENST00000568190 ZNF316A6NFI3 1004 aaPredicted RBP11.32□□□□□ -0.6
SIN3A-209ENST00000568190 CHRNA2Q15822 529 aa11.32□□□□□ -0.6
SIN3A-209ENST00000568190 VPS72Q15906 364 aa11.32□□□□□ -0.6
SIN3A-209ENST00000568190 TRPC5Q9UL62 973 aaPredicted RBP11.32□□□□□ -0.6
SIN3A-209ENST00000568190 PARP4Q9UKK3 1724 aaKnown RBP11.32□□□□□ -0.6
SIN3A-209ENST00000568190 RGPD2P0DJD1 1756 aa11.31□□□□□ -0.6
SIN3A-209ENST00000568190 IP6K1Q92551 441 aa11.31□□□□□ -0.6
SIN3A-209ENST00000568190 CRB1P82279 1406 aa11.31□□□□□ -0.6
SIN3A-209ENST00000568190 ERBB3P21860 1342 aa11.31□□□□□ -0.6
SIN3A-209ENST00000568190 INSRP06213 1382 aa11.3□□□□□ -0.6
SIN3A-209ENST00000568190 SOX12O15370 315 aa11.3□□□□□ -0.6
SIN3A-209ENST00000568190 POTEAQ6S8J7 498 aa11.3□□□□□ -0.6
SIN3A-209ENST00000568190 MORC1Q86VD1 984 aa11.3□□□□□ -0.6
SIN3A-209ENST00000568190 AXIN2Q9Y2T1 843 aa11.3□□□□□ -0.6
SIN3A-209ENST00000568190 SPATA31A5Q5VU36 1347 aa11.3□□□□□ -0.6
SIN3A-209ENST00000568190 SPATA31A7Q8IWB4 1347 aa11.3□□□□□ -0.6
SIN3A-209ENST00000568190 WDR17Q8IZU2 1322 aa11.3□□□□□ -0.6
SIN3A-209ENST00000568190 BRWD3Q6RI45 1802 aa11.3□□□□□ -0.6
SIN3A-209ENST00000568190 PARD3Q8TEW0 1356 aa11.29□□□□□ -0.6
SIN3A-209ENST00000568190 RGPD1P0DJD0 1748 aa11.29□□□□□ -0.6
SIN3A-209ENST00000568190 HOXC9P31274 260 aa11.29□□□□□ -0.6
SIN3A-209ENST00000568190 RBM6P78332 1123 aaKnown RBP11.29□□□□□ -0.6
SIN3A-209ENST00000568190 GJD4Q96KN9 370 aaPredicted RBP11.29□□□□□ -0.6
SIN3A-209ENST00000568190 QTRT2Q9H974 415 aaKnown RBP11.29□□□□□ -0.6
SIN3A-209ENST00000568190 NCAPD2Q15021 1401 aa11.28□□□□□ -0.6
SIN3A-209ENST00000568190 RRS1Q15050 365 aaKnown RBP11.28□□□□□ -0.6
SIN3A-209ENST00000568190 POLKQ9UBT6 870 aa11.28□□□□□ -0.6
SIN3A-209ENST00000568190 SPATA31A1Q5TZJ5 1347 aa11.28□□□□□ -0.6
SIN3A-209ENST00000568190 ONECUT3O60422 494 aaPredicted RBP11.27□□□□□ -0.61
SIN3A-209ENST00000568190 FBLN1P23142 703 aa11.27□□□□□ -0.61
SIN3A-209ENST00000568190 RXRBP28702 533 aa11.27□□□□□ -0.61
SIN3A-209ENST00000568190 AMPHP49418 695 aa11.27□□□□□ -0.61
SIN3A-209ENST00000568190 DDX10Q13206 875 aaKnown RBP11.27□□□□□ -0.61
SIN3A-209ENST00000568190 THRAP3Q9Y2W1 955 aaKnown RBP11.27□□□□□ -0.61
SIN3A-209ENST00000568190 EMILIN1Q9Y6C2 1016 aa11.27□□□□□ -0.61
SIN3A-209ENST00000568190 LRRC37A3O60309 1634 aa11.27□□□□□ -0.61
SIN3A-209ENST00000568190 RGS12O14924 1447 aa11.26□□□□□ -0.61
SIN3A-209ENST00000568190 CC2D1BQ5T0F9 858 aaKnown RBP11.26□□□□□ -0.61
SIN3A-209ENST00000568190 LARP1Q6PKG0 1096 aaKnown RBP11.26□□□□□ -0.61
SIN3A-209ENST00000568190 CARD10Q9BWT7 1032 aa11.26□□□□□ -0.61
SIN3A-209ENST00000568190 DISP2A7MBM2 1401 aa11.26□□□□□ -0.61
SIN3A-209ENST00000568190 COL3A1P02461 1466 aaPredicted RBP11.25□□□□□ -0.61
SIN3A-209ENST00000568190 ZBTB7CA1YPR0 619 aa11.25□□□□□ -0.61
SIN3A-209ENST00000568190 EVA1CP58658 441 aa11.25□□□□□ -0.61
SIN3A-209ENST00000568190 BARGINQ6ZT62 677 aa11.25□□□□□ -0.61
SIN3A-209ENST00000568190 ANKRD24Q8TF21 1146 aa11.25□□□□□ -0.61
SIN3A-209ENST00000568190 STRN4Q9NRL3 753 aa11.25□□□□□ -0.61
SIN3A-209ENST00000568190 PLEKHG2Q9H7P9 1386 aa11.25□□□□□ -0.61
SIN3A-209ENST00000568190 PKD1L3Q7Z443 1732 aa11.24□□□□□ -0.61
SIN3A-209ENST00000568190 SHANK3Q9BYB0 1731 aa11.24□□□□□ -0.61
SIN3A-209ENST00000568190 TNNT2P45379 298 aaPredicted RBP11.24□□□□□ -0.61
SIN3A-209ENST00000568190 HSP90AB2PQ58FF8 381 aa11.24□□□□□ -0.61
SIN3A-209ENST00000568190 TCP11L2Q8N4U5 519 aa11.24□□□□□ -0.61
SIN3A-209ENST00000568190 RALBP1Q15311 655 aa11.23□□□□□ -0.61
SIN3A-209ENST00000568190 TOM1L2Q6ZVM7 507 aa11.23□□□□□ -0.61
SIN3A-209ENST00000568190 CDCA7Q9BWT1 371 aaPredicted RBP11.22□□□□□ -0.61
SIN3A-209ENST00000568190 CCDC9Q9Y3X0 531 aaKnown RBP11.22□□□□□ -0.61
SIN3A-209ENST00000568190 TNS2Q63HR2 1409 aa11.21□□□□□ -0.61
SIN3A-209ENST00000568190 PPM1GO15355 546 aaPredicted RBP11.21□□□□□ -0.61
SIN3A-209ENST00000568190 CSB-PGBD3P0DP91 1061 aa11.21□□□□□ -0.61
SIN3A-209ENST00000568190 PPP2R1AP30153 589 aa11.21□□□□□ -0.61
SIN3A-209ENST00000568190 MTHFSP49914 203 aa11.21□□□□□ -0.61
SIN3A-209ENST00000568190 KDRP35968 1356 aa11.2□□□□□ -0.62
SIN3A-209ENST00000568190 IGSF1Q8N6C5 1336 aa11.2□□□□□ -0.62
SIN3A-209ENST00000568190 EIF4A2Q14240 407 aaKnown RBP11.2□□□□□ -0.62
SIN3A-209ENST00000568190 FAM98CQ17RN3 349 aaKnown RBP11.2□□□□□ -0.62
SIN3A-209ENST00000568190 NLRP2Q9NX02 1062 aa11.2□□□□□ -0.62
SIN3A-209ENST00000568190 SBF2Q86WG5 1849 aa11.2□□□□□ -0.62
SIN3A-209ENST00000568190 OVOS2A0A0G2JMS6 1433 aa11.19□□□□□ -0.62
SIN3A-209ENST00000568190 NBPF6Q5VWK0 638 aa11.19□□□□□ -0.62
SIN3A-209ENST00000568190 SEPT12Q8IYM1 358 aa11.19□□□□□ -0.62
SIN3A-209ENST00000568190 NBPF4Q96M43 638 aa11.19□□□□□ -0.62
SIN3A-209ENST00000568190 PRKRIP1Q9H875 184 aaPredicted RBP11.19□□□□□ -0.62
SIN3A-209ENST00000568190 MEGF6O75095 1541 aa11.19□□□□□ -0.62
SIN3A-209ENST00000568190 MYBBP1AQ9BQG0 1328 aaKnown RBP11.18□□□□□ -0.62
SIN3A-209ENST00000568190 IL13P35225 146 aa11.18□□□□□ -0.62
SIN3A-209ENST00000568190 LTV1Q96GA3 475 aaPredicted RBP11.18□□□□□ -0.62
SIN3A-209ENST00000568190 USP35Q9P2H5 1018 aa11.18□□□□□ -0.62
SIN3A-209ENST00000568190 BCL9O00512 1426 aa11.18□□□□□ -0.62
SIN3A-209ENST00000568190 IL2RBP14784 551 aa11.17□□□□□ -0.62
SIN3A-209ENST00000568190 CFAP53Q96M91 514 aa11.17□□□□□ -0.62
SIN3A-209ENST00000568190 EYA1Q99502 592 aa11.17□□□□□ -0.62
SIN3A-209ENST00000568190 VIRMAQ69YN4 1812 aaKnown RBP11.16□□□□□ -0.62
SIN3A-209ENST00000568190 TNS1Q9HBL0 1735 aaKnown RBP11.15□□□□□ -0.62
SIN3A-209ENST00000568190 DIAPH1O60610 1272 aaKnown RBP11.15□□□□□ -0.62
SIN3A-209ENST00000568190 NHSQ6T4R5 1651 aa11.14□□□□□ -0.63
SIN3A-209ENST00000568190 RGPD3A6NKT7 1758 aaPredicted RBP11.14□□□□□ -0.63
SIN3A-209ENST00000568190 RGPD4Q7Z3J3 1758 aa11.14□□□□□ -0.63
SIN3A-209ENST00000568190 CNGB1Q14028 1251 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms