RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 LARP1Q6PKG0 1096 aaKnown RBP11.44□□□□□ -0.58
HDGFL3-205ENST00000568129 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.44□□□□□ -0.58
HDGFL3-205ENST00000568129 CRB1P82279 1406 aa11.43□□□□□ -0.58
HDGFL3-205ENST00000568129 FYB1O15117 783 aa11.43□□□□□ -0.58
HDGFL3-205ENST00000568129 HSPA5P11021 654 aaKnown RBP11.43□□□□□ -0.58
HDGFL3-205ENST00000568129 EVA1CP58658 441 aa11.43□□□□□ -0.58
HDGFL3-205ENST00000568129 FAM98CQ17RN3 349 aaKnown RBP11.43□□□□□ -0.58
HDGFL3-205ENST00000568129 KRT27Q7Z3Y8 459 aa11.43□□□□□ -0.58
HDGFL3-205ENST00000568129 CARD14Q9BXL6 1004 aa11.43□□□□□ -0.58
HDGFL3-205ENST00000568129 WDR17Q8IZU2 1322 aa11.42□□□□□ -0.58
HDGFL3-205ENST00000568129 TCP11L2Q8N4U5 519 aa11.42□□□□□ -0.58
HDGFL3-205ENST00000568129 STRN4Q9NRL3 753 aa11.42□□□□□ -0.58
HDGFL3-205ENST00000568129 CCDC9Q9Y3X0 531 aaKnown RBP11.42□□□□□ -0.58
HDGFL3-205ENST00000568129 MAP2P11137 1827 aaKnown RBP11.41□□□□□ -0.58
HDGFL3-205ENST00000568129 SBF2Q86WG5 1849 aa11.41□□□□□ -0.58
HDGFL3-205ENST00000568129 CARD10Q9BWT7 1032 aa11.4□□□□□ -0.58
HDGFL3-205ENST00000568129 BLMP54132 1417 aaPredicted RBP11.4□□□□□ -0.58
HDGFL3-205ENST00000568129 PEAK1Q9H792 1746 aa11.4□□□□□ -0.58
HDGFL3-205ENST00000568129 ANKRD26Q9UPS8 1709 aa11.4□□□□□ -0.58
HDGFL3-205ENST00000568129 FAM208AQ9UK61 1670 aaKnown RBP11.4□□□□□ -0.59
HDGFL3-205ENST00000568129 C11orf95C9JLR9 678 aaPredicted RBP11.39□□□□□ -0.59
HDGFL3-205ENST00000568129 RGPD1P0DJD0 1748 aa11.39□□□□□ -0.59
HDGFL3-205ENST00000568129 IP6K1Q92551 441 aa11.39□□□□□ -0.59
HDGFL3-205ENST00000568129 COG3Q96JB2 828 aa11.39□□□□□ -0.59
HDGFL3-205ENST00000568129 ERBB3P21860 1342 aa11.38□□□□□ -0.59
HDGFL3-205ENST00000568129 DISP2A7MBM2 1401 aa11.38□□□□□ -0.59
HDGFL3-205ENST00000568129 CDCA7Q9BWT1 371 aaPredicted RBP11.38□□□□□ -0.59
HDGFL3-205ENST00000568129 LRRC37A3O60309 1634 aa11.38□□□□□ -0.59
HDGFL3-205ENST00000568129 TNS1Q9HBL0 1735 aaKnown RBP11.38□□□□□ -0.59
HDGFL3-205ENST00000568129 BCL9O00512 1426 aa11.37□□□□□ -0.59
HDGFL3-205ENST00000568129 RGPD2P0DJD1 1756 aa11.37□□□□□ -0.59
HDGFL3-205ENST00000568129 KIF24Q5T7B8 1368 aa11.37□□□□□ -0.59
HDGFL3-205ENST00000568129 CCDC7Q96M83 1385 aa11.37□□□□□ -0.59
HDGFL3-205ENST00000568129 MAP3K19Q56UN5 1328 aa11.36□□□□□ -0.59
HDGFL3-205ENST00000568129 FAM196AQ6ZSG2 479 aa11.36□□□□□ -0.59
HDGFL3-205ENST00000568129 TOM1L2Q6ZVM7 507 aa11.36□□□□□ -0.59
HDGFL3-205ENST00000568129 RTL1A6NKG5 1358 aa11.36□□□□□ -0.59
HDGFL3-205ENST00000568129 NSD3Q9BZ95 1437 aa11.35□□□□□ -0.59
HDGFL3-205ENST00000568129 SOX12O15370 315 aa11.35□□□□□ -0.59
HDGFL3-205ENST00000568129 GGNBP2Q9H3C7 697 aa11.35□□□□□ -0.59
HDGFL3-205ENST00000568129 USP35Q9P2H5 1018 aa11.35□□□□□ -0.59
HDGFL3-205ENST00000568129 FBLN1P23142 703 aa11.34□□□□□ -0.59
HDGFL3-205ENST00000568129 HOXC9P31274 260 aa11.34□□□□□ -0.59
HDGFL3-205ENST00000568129 ZBTB7CA1YPR0 619 aa11.33□□□□□ -0.6
HDGFL3-205ENST00000568129 ANKRD24Q8TF21 1146 aa11.33□□□□□ -0.6
HDGFL3-205ENST00000568129 PANK3Q9H999 370 aa11.33□□□□□ -0.6
HDGFL3-205ENST00000568129 CGNL1Q0VF96 1302 aa11.33□□□□□ -0.6
HDGFL3-205ENST00000568129 INSRP06213 1382 aa11.32□□□□□ -0.6
HDGFL3-205ENST00000568129 RGPD3A6NKT7 1758 aaPredicted RBP11.32□□□□□ -0.6
HDGFL3-205ENST00000568129 RGPD4Q7Z3J3 1758 aa11.32□□□□□ -0.6
HDGFL3-205ENST00000568129 PDE3BQ13370 1112 aa11.32□□□□□ -0.6
HDGFL3-205ENST00000568129 KIF7Q2M1P5 1343 aa11.32□□□□□ -0.6
HDGFL3-205ENST00000568129 NSD2O96028 1365 aa11.31□□□□□ -0.6
HDGFL3-205ENST00000568129 A0A0G2JS52 829 aa11.31□□□□□ -0.6
HDGFL3-205ENST00000568129 PER1O15534 1290 aaPredicted RBP11.31□□□□□ -0.6
HDGFL3-205ENST00000568129 MYT1Q01538 1121 aa11.31□□□□□ -0.6
HDGFL3-205ENST00000568129 DDB1Q16531 1140 aa11.31□□□□□ -0.6
HDGFL3-205ENST00000568129 FAM182BQ5T319 152 aa11.31□□□□□ -0.6
HDGFL3-205ENST00000568129 MARCH10Q8NA82 808 aaPredicted RBP11.31□□□□□ -0.6
HDGFL3-205ENST00000568129 SHANK3Q9BYB0 1731 aa11.31□□□□□ -0.6
HDGFL3-205ENST00000568129 KAT6BQ8WYB5 2073 aa11.31□□□□□ -0.6
HDGFL3-205ENST00000568129 OVOS2A0A0G2JMS6 1433 aa11.3□□□□□ -0.6
HDGFL3-205ENST00000568129 NCAPD2Q15021 1401 aa11.3□□□□□ -0.6
HDGFL3-205ENST00000568129 TNS2Q63HR2 1409 aa11.3□□□□□ -0.6
HDGFL3-205ENST00000568129 CSB-PGBD3P0DP91 1061 aa11.3□□□□□ -0.6
HDGFL3-205ENST00000568129 AMPHP49418 695 aa11.3□□□□□ -0.6
HDGFL3-205ENST00000568129 RRS1Q15050 365 aaKnown RBP11.3□□□□□ -0.6
HDGFL3-205ENST00000568129 DEFB132Q7Z7B7 95 aa11.3□□□□□ -0.6
HDGFL3-205ENST00000568129 WASHC2AQ641Q2 1341 aa11.3□□□□□ -0.6
HDGFL3-205ENST00000568129 FLT4P35916 1363 aa11.29□□□□□ -0.6
HDGFL3-205ENST00000568129 EXOC5O00471 708 aa11.29□□□□□ -0.6
HDGFL3-205ENST00000568129 IL2RBP14784 551 aa11.29□□□□□ -0.6
HDGFL3-205ENST00000568129 SF3B2Q13435 895 aaKnown RBP11.29□□□□□ -0.6
HDGFL3-205ENST00000568129 CAMKK2Q96RR4 588 aa11.29□□□□□ -0.6
HDGFL3-205ENST00000568129 NLRP2Q9NX02 1062 aa11.29□□□□□ -0.6
HDGFL3-205ENST00000568129 RREB1Q92766 1687 aa11.29□□□□□ -0.6
HDGFL3-205ENST00000568129 PARD3Q8TEW0 1356 aa11.28□□□□□ -0.6
HDGFL3-205ENST00000568129 BAG6P46379 1132 aa11.28□□□□□ -0.6
HDGFL3-205ENST00000568129 HSP90AB2PQ58FF8 381 aa11.28□□□□□ -0.6
HDGFL3-205ENST00000568129 AMER1Q5JTC6 1135 aaPredicted RBP11.28□□□□□ -0.6
HDGFL3-205ENST00000568129 POLKQ9UBT6 870 aa11.28□□□□□ -0.6
HDGFL3-205ENST00000568129 SMG6Q86US8 1419 aaKnown RBP11.27□□□□□ -0.6
HDGFL3-205ENST00000568129 PLSCR1O15162 318 aa11.27□□□□□ -0.61
HDGFL3-205ENST00000568129 TRIM37O94972 964 aa11.27□□□□□ -0.61
HDGFL3-205ENST00000568129 NBPF6Q5VWK0 638 aa11.27□□□□□ -0.61
HDGFL3-205ENST00000568129 NBPF4Q96M43 638 aa11.27□□□□□ -0.61
HDGFL3-205ENST00000568129 NPC1L1Q9UHC9 1359 aa11.27□□□□□ -0.61
HDGFL3-205ENST00000568129 NHSQ6T4R5 1651 aa11.27□□□□□ -0.61
HDGFL3-205ENST00000568129 BCL11BQ9C0K0 894 aaPredicted RBP11.26□□□□□ -0.61
HDGFL3-205ENST00000568129 EMILIN1Q9Y6C2 1016 aa11.26□□□□□ -0.61
HDGFL3-205ENST00000568129 NUP188Q5SRE5 1749 aa11.26□□□□□ -0.61
HDGFL3-205ENST00000568129 EN1Q05925 392 aaPredicted RBP11.25□□□□□ -0.61
HDGFL3-205ENST00000568129 POLR3GLQ9BT43 218 aa11.25□□□□□ -0.61
HDGFL3-205ENST00000568129 PKD1L3Q7Z443 1732 aa11.25□□□□□ -0.61
HDGFL3-205ENST00000568129 PLEKHG2Q9H7P9 1386 aa11.25□□□□□ -0.61
HDGFL3-205ENST00000568129 APBA3O96018 575 aa11.24□□□□□ -0.61
HDGFL3-205ENST00000568129 LTV1Q96GA3 475 aaPredicted RBP11.24□□□□□ -0.61
HDGFL3-205ENST00000568129 KNSTRNQ9Y448 316 aa11.24□□□□□ -0.61
HDGFL3-205ENST00000568129 MEGF6O75095 1541 aa11.24□□□□□ -0.61
HDGFL3-205ENST00000568129 BTAF1O14981 1849 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms