RNA–Protein interactions for RNA: ENST00000567535.5

SCAMP5-213, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 3

Gene SCAMP5, Length 593 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-213ENST00000567535 WDR17Q8IZU2 1322 aa28.16■■■□□ 2.1
SCAMP5-213ENST00000567535 ARHGEF25Q86VW2 580 aa28.15■■■□□ 2.1
SCAMP5-213ENST00000567535 AXIN2Q9Y2T1 843 aa28.15■■■□□ 2.1
SCAMP5-213ENST00000567535 OVOS2A0A0G2JMS6 1433 aa28.15■■■□□ 2.1
SCAMP5-213ENST00000567535 OVOS2A0A0J9YW53 1432 aa28.15■■■□□ 2.1
SCAMP5-213ENST00000567535 OVOS2Q6IE36 1432 aa28.15■■■□□ 2.1
SCAMP5-213ENST00000567535 C11orf95C9JLR9 678 aaPredicted RBP28.14■■■□□ 2.1
SCAMP5-213ENST00000567535 TOM1L2Q6ZVM7 507 aa28.14■■■□□ 2.1
SCAMP5-213ENST00000567535 CARD11Q9BXL7 1154 aa28.13■■■□□ 2.09
SCAMP5-213ENST00000567535 ABCC6O95255 1503 aa28.13■■■□□ 2.09
SCAMP5-213ENST00000567535 RGPD5Q99666 1765 aa28.12■■■□□ 2.09
SCAMP5-213ENST00000567535 USP54Q70EL1 1684 aa28.12■■■□□ 2.09
SCAMP5-213ENST00000567535 CD163L1Q9NR16 1453 aa28.1■■■□□ 2.09
SCAMP5-213ENST00000567535 DDB1Q16531 1140 aa28.1■■■□□ 2.09
SCAMP5-213ENST00000567535 TONSLQ96HA7 1378 aa28.1■■■□□ 2.09
SCAMP5-213ENST00000567535 SOX12O15370 315 aa28.09■■■□□ 2.09
SCAMP5-213ENST00000567535 RGPD3A6NKT7 1758 aaPredicted RBP28.09■■■□□ 2.09
SCAMP5-213ENST00000567535 RGPD4Q7Z3J3 1758 aa28.09■■■□□ 2.09
SCAMP5-213ENST00000567535 SBF2Q86WG5 1849 aa28.08■■■□□ 2.09
SCAMP5-213ENST00000567535 CDCA7Q9BWT1 371 aaPredicted RBP28.07■■■□□ 2.08
SCAMP5-213ENST00000567535 USP31Q70CQ4 1352 aa28.07■■■□□ 2.08
SCAMP5-213ENST00000567535 CARD10Q9BWT7 1032 aa28.05■■■□□ 2.08
SCAMP5-213ENST00000567535 BCL9O00512 1426 aa28.03■■■□□ 2.08
SCAMP5-213ENST00000567535 CSB-PGBD3P0DP91 1061 aa28.03■■■□□ 2.08
SCAMP5-213ENST00000567535 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.03■■■□□ 2.08
SCAMP5-213ENST00000567535 NBPF14Q5TI25 921 aa28.02■■■□□ 2.08
SCAMP5-213ENST00000567535 CCDC7Q96M83 1385 aa28.01■■■□□ 2.07
SCAMP5-213ENST00000567535 EDC4Q6P2E9 1401 aaKnown RBP28.01■■■□□ 2.07
SCAMP5-213ENST00000567535 NME9Q86XW9 330 aa28■■■□□ 2.07
SCAMP5-213ENST00000567535 MARCH10Q8NA82 808 aaPredicted RBP28■■■□□ 2.07
SCAMP5-213ENST00000567535 TMC1Q8TDI8 760 aa28■■■□□ 2.07
SCAMP5-213ENST00000567535 LTN1O94822 1766 aa28■■■□□ 2.07
SCAMP5-213ENST00000567535 HDGFL2Q7Z4V5 671 aaPredicted RBP27.99■■■□□ 2.07
SCAMP5-213ENST00000567535 PLSCR1O15162 318 aa27.98■■■□□ 2.07
SCAMP5-213ENST00000567535 BCL11BQ9C0K0 894 aaPredicted RBP27.98■■■□□ 2.07
SCAMP5-213ENST00000567535 SLC12A5Q9H2X9 1139 aa27.98■■■□□ 2.07
SCAMP5-213ENST00000567535 A0A1W2PP64 1363 aa27.98■■■□□ 2.07
SCAMP5-213ENST00000567535 PUS7Q96PZ0 661 aaKnown RBP27.97■■■□□ 2.07
SCAMP5-213ENST00000567535 TNS2Q63HR2 1409 aa27.96■■■□□ 2.07
SCAMP5-213ENST00000567535 ERBB3P21860 1342 aa27.95■■■□□ 2.07
SCAMP5-213ENST00000567535 PTF1AQ7RTS3 328 aa27.95■■■□□ 2.06
SCAMP5-213ENST00000567535 TERF2IPQ9NYB0 399 aa27.95■■■□□ 2.06
SCAMP5-213ENST00000567535 NINLQ9Y2I6 1382 aa27.92■■■□□ 2.06
SCAMP5-213ENST00000567535 EXOC5O00471 708 aa27.92■■■□□ 2.06
SCAMP5-213ENST00000567535 TESK2Q96S53 571 aa27.91■■■□□ 2.06
SCAMP5-213ENST00000567535 ST20-MTHFSA0A0A6YYL1 179 aa27.88■■■□□ 2.05
SCAMP5-213ENST00000567535 NLRP2Q9NX02 1062 aa27.88■■■□□ 2.05
SCAMP5-213ENST00000567535 NHSQ6T4R5 1651 aa27.87■■■□□ 2.05
SCAMP5-213ENST00000567535 ANO8Q9HCE9 1232 aaPredicted RBP27.87■■■□□ 2.05
SCAMP5-213ENST00000567535 ANKRD24Q8TF21 1146 aa27.86■■■□□ 2.05
SCAMP5-213ENST00000567535 CASZ1Q86V15 1759 aa27.86■■■□□ 2.05
SCAMP5-213ENST00000567535 PROM2Q8N271 834 aa27.85■■■□□ 2.05
SCAMP5-213ENST00000567535 SPON1Q9HCB6 807 aa27.85■■■□□ 2.05
SCAMP5-213ENST00000567535 SLC24A1O60721 1099 aa27.84■■■□□ 2.05
SCAMP5-213ENST00000567535 IL2RBP14784 551 aa27.84■■■□□ 2.05
SCAMP5-213ENST00000567535 FAM208AQ9UK61 1670 aaKnown RBP27.84■■■□□ 2.05
SCAMP5-213ENST00000567535 KCNQ2O43526 872 aa27.83■■■□□ 2.05
SCAMP5-213ENST00000567535 TRIM26Q12899 539 aaPredicted RBP27.8■■■□□ 2.04
SCAMP5-213ENST00000567535 TXNRD1Q16881 649 aa27.8■■■□□ 2.04
SCAMP5-213ENST00000567535 IP6K1Q92551 441 aa27.79■■■□□ 2.04
SCAMP5-213ENST00000567535 ANKRD36BQ8N2N9 1353 aa27.78■■■□□ 2.04
SCAMP5-213ENST00000567535 COG3Q96JB2 828 aa27.77■■■□□ 2.04
SCAMP5-213ENST00000567535 PPP1R1BQ9UD71 204 aaPredicted RBP27.77■■■□□ 2.04
SCAMP5-213ENST00000567535 USP47Q96K76 1375 aa27.75■■■□□ 2.03
SCAMP5-213ENST00000567535 ACSBG1Q96GR2 724 aa27.75■■■□□ 2.03
SCAMP5-213ENST00000567535 BTAF1O14981 1849 aa27.74■■■□□ 2.03
SCAMP5-213ENST00000567535 MAP3K19Q56UN5 1328 aa27.74■■■□□ 2.03
SCAMP5-213ENST00000567535 PDGFDQ9GZP0 370 aaPredicted RBP27.73■■■□□ 2.03
SCAMP5-213ENST00000567535 STK32BQ9NY57 414 aa27.73■■■□□ 2.03
SCAMP5-213ENST00000567535 PAPPAQ13219 1627 aa27.72■■■□□ 2.03
SCAMP5-213ENST00000567535 TMF1P82094 1093 aa27.71■■■□□ 2.03
SCAMP5-213ENST00000567535 SLC15A2Q16348 729 aa27.71■■■□□ 2.03
SCAMP5-213ENST00000567535 LTV1Q96GA3 475 aaPredicted RBP27.71■■■□□ 2.03
SCAMP5-213ENST00000567535 HOXC9P31274 260 aa27.7■■■□□ 2.02
SCAMP5-213ENST00000567535 RTL1A6NKG5 1358 aa27.69■■■□□ 2.02
SCAMP5-213ENST00000567535 ZBTB7AO95365 584 aa27.67■■■□□ 2.02
SCAMP5-213ENST00000567535 FBLN1P23142 703 aa27.67■■■□□ 2.02
SCAMP5-213ENST00000567535 AMPHP49418 695 aa27.67■■■□□ 2.02
SCAMP5-213ENST00000567535 MYOM1P52179 1685 aa27.67■■■□□ 2.02
SCAMP5-213ENST00000567535 RGPD2P0DJD1 1756 aa27.66■■■□□ 2.02
SCAMP5-213ENST00000567535 FYB1O15117 783 aa27.65■■■□□ 2.02
SCAMP5-213ENST00000567535 KIF20BQ96Q89 1820 aa27.64■■■□□ 2.02
SCAMP5-213ENST00000567535 SHANK3Q9BYB0 1731 aa27.64■■■□□ 2.02
SCAMP5-213ENST00000567535 PTGER2P43116 358 aa27.64■■■□□ 2.02
SCAMP5-213ENST00000567535 DDX54Q8TDD1 881 aaKnown RBP27.63■■■□□ 2.01
SCAMP5-213ENST00000567535 GGNBP2Q9H3C7 697 aa27.63■■■□□ 2.01
SCAMP5-213ENST00000567535 MEGF6O75095 1541 aa27.62■■■□□ 2.01
SCAMP5-213ENST00000567535 DOT1LQ8TEK3 1739 aa27.62■■■□□ 2.01
SCAMP5-213ENST00000567535 CDCA8Q53HL2 280 aa27.62■■■□□ 2.01
SCAMP5-213ENST00000567535 KAT6BQ8WYB5 2073 aa27.62■■■□□ 2.01
SCAMP5-213ENST00000567535 RRS1Q15050 365 aaKnown RBP27.61■■■□□ 2.01
SCAMP5-213ENST00000567535 MTFR1LQ9H019 292 aa27.6■■■□□ 2.01
SCAMP5-213ENST00000567535 ATF5Q9Y2D1 282 aaPredicted RBP27.6■■■□□ 2.01
SCAMP5-213ENST00000567535 SMG6Q86US8 1419 aaKnown RBP27.58■■■□□ 2.01
SCAMP5-213ENST00000567535 LRRC4BQ9NT99 713 aa27.58■■■□□ 2.01
SCAMP5-213ENST00000567535 DCAF8L1A6NGE4 600 aa27.57■■■□□ 2
SCAMP5-213ENST00000567535 ZNF827Q17R98 1081 aa27.56■■■□□ 2
SCAMP5-213ENST00000567535 NBPF6Q5VWK0 638 aa27.56■■■□□ 2
SCAMP5-213ENST00000567535 ZCRB1Q8TBF4 217 aaKnown RBP27.56■■■□□ 2
SCAMP5-213ENST00000567535 NBPF4Q96M43 638 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms