RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 SLC12A5Q9H2X9 1139 aa21.71■■□□□ 1.07
CDR2-206ENST00000567406 WDR17Q8IZU2 1322 aa21.71■■□□□ 1.07
CDR2-206ENST00000567406 PARP4Q9UKK3 1724 aaKnown RBP21.71■■□□□ 1.07
CDR2-206ENST00000567406 DDB1Q16531 1140 aa21.7■■□□□ 1.06
CDR2-206ENST00000567406 PTF1AQ7RTS3 328 aa21.7■■□□□ 1.06
CDR2-206ENST00000567406 LRP5O75197 1615 aa21.69■■□□□ 1.06
CDR2-206ENST00000567406 CD163L1Q9NR16 1453 aa21.68■■□□□ 1.06
CDR2-206ENST00000567406 NFAT5O94916 1531 aa21.67■■□□□ 1.06
CDR2-206ENST00000567406 LRRC37A3O60309 1634 aa21.66■■□□□ 1.06
CDR2-206ENST00000567406 SBNO2Q9Y2G9 1366 aa21.66■■□□□ 1.06
CDR2-206ENST00000567406 MARCH10Q8NA82 808 aaPredicted RBP21.66■■□□□ 1.06
CDR2-206ENST00000567406 MON2Q7Z3U7 1717 aa21.66■■□□□ 1.06
CDR2-206ENST00000567406 CARD10Q9BWT7 1032 aa21.65■■□□□ 1.06
CDR2-206ENST00000567406 OVOS2A0A0G2JMS6 1433 aa21.64■■□□□ 1.06
CDR2-206ENST00000567406 OVOS2A0A0J9YW53 1432 aa21.64■■□□□ 1.06
CDR2-206ENST00000567406 OVOS2Q6IE36 1432 aa21.64■■□□□ 1.06
CDR2-206ENST00000567406 PARD3Q8TEW0 1356 aa21.64■■□□□ 1.06
CDR2-206ENST00000567406 PEAK1Q9H792 1746 aa21.64■■□□□ 1.06
CDR2-206ENST00000567406 HDGFL2Q7Z4V5 671 aaPredicted RBP21.64■■□□□ 1.05
CDR2-206ENST00000567406 NUP188Q5SRE5 1749 aa21.63■■□□□ 1.05
CDR2-206ENST00000567406 RREB1Q92766 1687 aa21.63■■□□□ 1.05
CDR2-206ENST00000567406 ST20-MTHFSA0A0A6YYL1 179 aa21.62■■□□□ 1.05
CDR2-206ENST00000567406 NBPF14Q5TI25 921 aa21.62■■□□□ 1.05
CDR2-206ENST00000567406 SBF2Q86WG5 1849 aa21.62■■□□□ 1.05
CDR2-206ENST00000567406 WNK3Q9BYP7 1800 aa21.62■■□□□ 1.05
CDR2-206ENST00000567406 USP31Q70CQ4 1352 aa21.61■■□□□ 1.05
CDR2-206ENST00000567406 A0A1W2PP64 1363 aa21.6■■□□□ 1.05
CDR2-206ENST00000567406 EXOC5O00471 708 aa21.59■■□□□ 1.05
CDR2-206ENST00000567406 TESK2Q96S53 571 aa21.59■■□□□ 1.05
CDR2-206ENST00000567406 CDCA7Q9BWT1 371 aaPredicted RBP21.59■■□□□ 1.05
CDR2-206ENST00000567406 NLRP2Q9NX02 1062 aa21.59■■□□□ 1.05
CDR2-206ENST00000567406 C11orf95C9JLR9 678 aaPredicted RBP21.58■■□□□ 1.05
CDR2-206ENST00000567406 BCL11BQ9C0K0 894 aaPredicted RBP21.58■■□□□ 1.05
CDR2-206ENST00000567406 TRIM26Q12899 539 aaPredicted RBP21.57■■□□□ 1.04
CDR2-206ENST00000567406 TERF2IPQ9NYB0 399 aa21.57■■□□□ 1.04
CDR2-206ENST00000567406 EDC4Q6P2E9 1401 aaKnown RBP21.56■■□□□ 1.04
CDR2-206ENST00000567406 PLSCR1O15162 318 aa21.56■■□□□ 1.04
CDR2-206ENST00000567406 FBLN1P23142 703 aa21.56■■□□□ 1.04
CDR2-206ENST00000567406 PROM2Q8N271 834 aa21.56■■□□□ 1.04
CDR2-206ENST00000567406 ANKRD24Q8TF21 1146 aa21.56■■□□□ 1.04
CDR2-206ENST00000567406 LTN1O94822 1766 aa21.56■■□□□ 1.04
CDR2-206ENST00000567406 ERBB3P21860 1342 aa21.55■■□□□ 1.04
CDR2-206ENST00000567406 KCNQ2O43526 872 aa21.55■■□□□ 1.04
CDR2-206ENST00000567406 ANO8Q9HCE9 1232 aaPredicted RBP21.55■■□□□ 1.04
CDR2-206ENST00000567406 CCDC7Q96M83 1385 aa21.55■■□□□ 1.04
CDR2-206ENST00000567406 ACSBG1Q96GR2 724 aa21.54■■□□□ 1.04
CDR2-206ENST00000567406 USP54Q70EL1 1684 aa21.53■■□□□ 1.04
CDR2-206ENST00000567406 LTV1Q96GA3 475 aaPredicted RBP21.53■■□□□ 1.04
CDR2-206ENST00000567406 PUS7Q96PZ0 661 aaKnown RBP21.52■■□□□ 1.04
CDR2-206ENST00000567406 PDGFDQ9GZP0 370 aaPredicted RBP21.52■■□□□ 1.04
CDR2-206ENST00000567406 ABCC6O95255 1503 aa21.5■■□□□ 1.03
CDR2-206ENST00000567406 TNS2Q63HR2 1409 aa21.5■■□□□ 1.03
CDR2-206ENST00000567406 BCL9O00512 1426 aa21.49■■□□□ 1.03
CDR2-206ENST00000567406 IL2RBP14784 551 aa21.49■■□□□ 1.03
CDR2-206ENST00000567406 IP6K1Q92551 441 aa21.48■■□□□ 1.03
CDR2-206ENST00000567406 SPON1Q9HCB6 807 aa21.48■■□□□ 1.03
CDR2-206ENST00000567406 TXNRD1Q16881 649 aa21.47■■□□□ 1.03
CDR2-206ENST00000567406 COG3Q96JB2 828 aa21.47■■□□□ 1.03
CDR2-206ENST00000567406 KAT6BQ8WYB5 2073 aa21.47■■□□□ 1.03
CDR2-206ENST00000567406 RGPD3A6NKT7 1758 aaPredicted RBP21.46■■□□□ 1.03
CDR2-206ENST00000567406 RGPD4Q7Z3J3 1758 aa21.46■■□□□ 1.03
CDR2-206ENST00000567406 MAP3K19Q56UN5 1328 aa21.46■■□□□ 1.03
CDR2-206ENST00000567406 PPP1R1BQ9UD71 204 aaPredicted RBP21.45■■□□□ 1.02
CDR2-206ENST00000567406 USP47Q96K76 1375 aa21.45■■□□□ 1.02
CDR2-206ENST00000567406 ZBTB7AO95365 584 aa21.44■■□□□ 1.02
CDR2-206ENST00000567406 DDX54Q8TDD1 881 aaKnown RBP21.44■■□□□ 1.02
CDR2-206ENST00000567406 NINLQ9Y2I6 1382 aa21.44■■□□□ 1.02
CDR2-206ENST00000567406 HOXC9P31274 260 aa21.43■■□□□ 1.02
CDR2-206ENST00000567406 AMPHP49418 695 aa21.43■■□□□ 1.02
CDR2-206ENST00000567406 TMF1P82094 1093 aa21.43■■□□□ 1.02
CDR2-206ENST00000567406 GGNBP2Q9H3C7 697 aa21.43■■□□□ 1.02
CDR2-206ENST00000567406 RRS1Q15050 365 aaKnown RBP21.42■■□□□ 1.02
CDR2-206ENST00000567406 ANKRD36BQ8N2N9 1353 aa21.42■■□□□ 1.02
CDR2-206ENST00000567406 STK32BQ9NY57 414 aa21.41■■□□□ 1.02
CDR2-206ENST00000567406 ATF5Q9Y2D1 282 aaPredicted RBP21.41■■□□□ 1.02
CDR2-206ENST00000567406 FYB1O15117 783 aa21.4■■□□□ 1.02
CDR2-206ENST00000567406 NHSQ6T4R5 1651 aa21.4■■□□□ 1.02
CDR2-206ENST00000567406 SLC24A1O60721 1099 aa21.39■■□□□ 1.01
CDR2-206ENST00000567406 SLC15A2Q16348 729 aa21.39■■□□□ 1.01
CDR2-206ENST00000567406 RGPD2P0DJD1 1756 aa21.38■■□□□ 1.01
CDR2-206ENST00000567406 CASZ1Q86V15 1759 aa21.38■■□□□ 1.01
CDR2-206ENST00000567406 PCGF6Q9BYE7 350 aa21.38■■□□□ 1.01
CDR2-206ENST00000567406 USHBP1Q8N6Y0 703 aa21.37■■□□□ 1.01
CDR2-206ENST00000567406 BTAF1O14981 1849 aa21.36■■□□□ 1.01
CDR2-206ENST00000567406 LRRC4BQ9NT99 713 aa21.35■■□□□ 1.01
CDR2-206ENST00000567406 PTGER2P43116 358 aa21.34■■□□□ 1.01
CDR2-206ENST00000567406 KCNQ4P56696 695 aa21.34■■□□□ 1.01
CDR2-206ENST00000567406 NBPF6Q5VWK0 638 aa21.34■■□□□ 1.01
CDR2-206ENST00000567406 SYTL4Q96C24 671 aaPredicted RBP21.34■■□□□ 1.01
CDR2-206ENST00000567406 NBPF4Q96M43 638 aa21.34■■□□□ 1.01
CDR2-206ENST00000567406 CARD14Q9BXL6 1004 aa21.34■■□□□ 1.01
CDR2-206ENST00000567406 PRIM1P49642 420 aaKnown RBP21.33■■□□□ 1.01
CDR2-206ENST00000567406 ZNF827Q17R98 1081 aa21.33■■□□□ 1.01
CDR2-206ENST00000567406 FAM208AQ9UK61 1670 aaKnown RBP21.32■■□□□ 1
CDR2-206ENST00000567406 MEGF6O75095 1541 aa21.31■■□□□ 1
CDR2-206ENST00000567406 HSP90AB2PQ58FF8 381 aa21.31■■□□□ 1
CDR2-206ENST00000567406 ZCRB1Q8TBF4 217 aaKnown RBP21.31■■□□□ 1
CDR2-206ENST00000567406 MYOM1P52179 1685 aa21.29■■□□□ 1
CDR2-206ENST00000567406 CDCA8Q53HL2 280 aa21.29■■□□□ 1
CDR2-206ENST00000567406 POLR3GLQ9BT43 218 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms