RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 ZRANB1Q9UGI0 708 aa26.36■■□□□ 1.81
IFT140-208ENST00000566818 ARHGEF25Q86VW2 580 aa26.35■■□□□ 1.81
IFT140-208ENST00000566818 BAG6P46379 1132 aa26.33■■□□□ 1.81
IFT140-208ENST00000566818 TMF1P82094 1093 aa26.33■■□□□ 1.81
IFT140-208ENST00000566818 PDE3BQ13370 1112 aa26.33■■□□□ 1.81
IFT140-208ENST00000566818 DEFB132Q7Z7B7 95 aa26.33■■□□□ 1.81
IFT140-208ENST00000566818 NME9Q86XW9 330 aa26.33■■□□□ 1.81
IFT140-208ENST00000566818 PARP4Q9UKK3 1724 aaKnown RBP26.33■■□□□ 1.81
IFT140-208ENST00000566818 FAM182BQ5T319 152 aa26.32■■□□□ 1.8
IFT140-208ENST00000566818 WDR17Q8IZU2 1322 aa26.32■■□□□ 1.8
IFT140-208ENST00000566818 FAM196AQ6ZSG2 479 aa26.31■■□□□ 1.8
IFT140-208ENST00000566818 TOM1L2Q6ZVM7 507 aa26.31■■□□□ 1.8
IFT140-208ENST00000566818 AXIN2Q9Y2T1 843 aa26.29■■□□□ 1.8
IFT140-208ENST00000566818 TNS1Q9HBL0 1735 aaKnown RBP26.28■■□□□ 1.8
IFT140-208ENST00000566818 CDCA8Q53HL2 280 aa26.28■■□□□ 1.8
IFT140-208ENST00000566818 WNK3Q9BYP7 1800 aa26.28■■□□□ 1.8
IFT140-208ENST00000566818 CSB-PGBD3P0DP91 1061 aa26.27■■□□□ 1.8
IFT140-208ENST00000566818 ANKRD36BQ8N2N9 1353 aa26.27■■□□□ 1.8
IFT140-208ENST00000566818 OVOS2A0A0J9YW53 1432 aa26.27■■□□□ 1.8
IFT140-208ENST00000566818 OVOS2Q6IE36 1432 aa26.27■■□□□ 1.8
IFT140-208ENST00000566818 RGPD5Q99666 1765 aa26.27■■□□□ 1.8
IFT140-208ENST00000566818 LTN1O94822 1766 aa26.25■■□□□ 1.79
IFT140-208ENST00000566818 LRRC37A3O60309 1634 aa26.25■■□□□ 1.79
IFT140-208ENST00000566818 DISP2A7MBM2 1401 aa26.25■■□□□ 1.79
IFT140-208ENST00000566818 CCER1Q8TC90 406 aaPredicted RBP26.25■■□□□ 1.79
IFT140-208ENST00000566818 C11orf95C9JLR9 678 aaPredicted RBP26.23■■□□□ 1.79
IFT140-208ENST00000566818 CDCA7Q9BWT1 371 aaPredicted RBP26.23■■□□□ 1.79
IFT140-208ENST00000566818 CARD10Q9BWT7 1032 aa26.22■■□□□ 1.79
IFT140-208ENST00000566818 CCDC7Q96M83 1385 aa26.21■■□□□ 1.79
IFT140-208ENST00000566818 OVOS2A0A0G2JMS6 1433 aa26.21■■□□□ 1.79
IFT140-208ENST00000566818 TRIM37O94972 964 aa26.2■■□□□ 1.78
IFT140-208ENST00000566818 DDB1Q16531 1140 aa26.2■■□□□ 1.78
IFT140-208ENST00000566818 COG3Q96JB2 828 aa26.2■■□□□ 1.78
IFT140-208ENST00000566818 EN1Q05925 392 aaPredicted RBP26.18■■□□□ 1.78
IFT140-208ENST00000566818 ERBB3P21860 1342 aa26.17■■□□□ 1.78
IFT140-208ENST00000566818 PARD3Q8TEW0 1356 aa26.16■■□□□ 1.78
IFT140-208ENST00000566818 PEAK1Q9H792 1746 aa26.15■■□□□ 1.78
IFT140-208ENST00000566818 APBA3O96018 575 aa26.14■■□□□ 1.78
IFT140-208ENST00000566818 MYOM1P52179 1685 aa26.14■■□□□ 1.78
IFT140-208ENST00000566818 ANKRD24Q8TF21 1146 aa26.13■■□□□ 1.77
IFT140-208ENST00000566818 NLRP2Q9NX02 1062 aa26.12■■□□□ 1.77
IFT140-208ENST00000566818 FAM208AQ9UK61 1670 aaKnown RBP26.12■■□□□ 1.77
IFT140-208ENST00000566818 KIF20BQ96Q89 1820 aa26.11■■□□□ 1.77
IFT140-208ENST00000566818 TNS2Q63HR2 1409 aa26.11■■□□□ 1.77
IFT140-208ENST00000566818 EZH2Q15910 746 aaKnown RBP26.1■■□□□ 1.77
IFT140-208ENST00000566818 IP6K1Q92551 441 aa26.1■■□□□ 1.77
IFT140-208ENST00000566818 CAMKK2Q96RR4 588 aa26.09■■□□□ 1.77
IFT140-208ENST00000566818 EXOC5O00471 708 aa26.08■■□□□ 1.77
IFT140-208ENST00000566818 RREB1Q92766 1687 aa26.08■■□□□ 1.77
IFT140-208ENST00000566818 RTL1A6NKG5 1358 aa26.07■■□□□ 1.76
IFT140-208ENST00000566818 BCL9O00512 1426 aa26.07■■□□□ 1.76
IFT140-208ENST00000566818 MAP3K19Q56UN5 1328 aa26.07■■□□□ 1.76
IFT140-208ENST00000566818 SBF2Q86WG5 1849 aa26.07■■□□□ 1.76
IFT140-208ENST00000566818 FYB1O15117 783 aa26.06■■□□□ 1.76
IFT140-208ENST00000566818 AMPHP49418 695 aa26.06■■□□□ 1.76
IFT140-208ENST00000566818 EIF4G2P78344 907 aaKnown RBP eCLIP26.06■■□□□ 1.76
IFT140-208ENST00000566818 MARCH10Q8NA82 808 aaPredicted RBP26.06■■□□□ 1.76
IFT140-208ENST00000566818 GGNBP2Q9H3C7 697 aa26.06■■□□□ 1.76
IFT140-208ENST00000566818 NSD3Q9BZ95 1437 aa26.05■■□□□ 1.76
IFT140-208ENST00000566818 IL2RBP14784 551 aa26.05■■□□□ 1.76
IFT140-208ENST00000566818 RGPD3A6NKT7 1758 aaPredicted RBP26.05■■□□□ 1.76
IFT140-208ENST00000566818 RGPD4Q7Z3J3 1758 aa26.05■■□□□ 1.76
IFT140-208ENST00000566818 PSDA5PKW4 1024 aaPredicted RBP26.03■■□□□ 1.76
IFT140-208ENST00000566818 HOXC9P31274 260 aa26.03■■□□□ 1.76
IFT140-208ENST00000566818 NUP188Q5SRE5 1749 aa26.02■■□□□ 1.76
IFT140-208ENST00000566818 LTV1Q96GA3 475 aaPredicted RBP26.02■■□□□ 1.76
IFT140-208ENST00000566818 BCL11BQ9C0K0 894 aaPredicted RBP26.02■■□□□ 1.76
IFT140-208ENST00000566818 LRP5O75197 1615 aa26.01■■□□□ 1.75
IFT140-208ENST00000566818 SMG6Q86US8 1419 aaKnown RBP26■■□□□ 1.75
IFT140-208ENST00000566818 HSPA5P11021 654 aaKnown RBP25.99■■□□□ 1.75
IFT140-208ENST00000566818 R3HDM1Q15032 1099 aaKnown RBP25.99■■□□□ 1.75
IFT140-208ENST00000566818 POLR3GLQ9BT43 218 aa25.99■■□□□ 1.75
IFT140-208ENST00000566818 RRS1Q15050 365 aaKnown RBP25.98■■□□□ 1.75
IFT140-208ENST00000566818 SRCAPQ6ZRS2 3230 aa25.98■■□□□ 1.75
IFT140-208ENST00000566818 FBLN1P23142 703 aa25.97■■□□□ 1.75
IFT140-208ENST00000566818 NBPF14Q5TI25 921 aa25.97■■□□□ 1.75
IFT140-208ENST00000566818 CARD14Q9BXL6 1004 aa25.97■■□□□ 1.75
IFT140-208ENST00000566818 KIF24Q5T7B8 1368 aa25.96■■□□□ 1.75
IFT140-208ENST00000566818 CGNL1Q0VF96 1302 aa25.96■■□□□ 1.75
IFT140-208ENST00000566818 PLSCR1O15162 318 aa25.96■■□□□ 1.75
IFT140-208ENST00000566818 NHSQ6T4R5 1651 aa25.96■■□□□ 1.75
IFT140-208ENST00000566818 FLT4P35916 1363 aa25.95■■□□□ 1.74
IFT140-208ENST00000566818 INSRP06213 1382 aa25.92■■□□□ 1.74
IFT140-208ENST00000566818 RGPD2P0DJD1 1756 aa25.9■■□□□ 1.74
IFT140-208ENST00000566818 PTF1AQ7RTS3 328 aa25.9■■□□□ 1.74
IFT140-208ENST00000566818 ANKRD26Q9UPS8 1709 aa25.88■■□□□ 1.73
IFT140-208ENST00000566818 ACSBG1Q96GR2 724 aa25.87■■□□□ 1.73
IFT140-208ENST00000566818 MEGF6O75095 1541 aa25.87■■□□□ 1.73
IFT140-208ENST00000566818 HSP90AB2PQ58FF8 381 aa25.85■■□□□ 1.73
IFT140-208ENST00000566818 DDX54Q8TDD1 881 aaKnown RBP25.85■■□□□ 1.73
IFT140-208ENST00000566818 KCNQ2O43526 872 aa25.84■■□□□ 1.73
IFT140-208ENST00000566818 NBPF6Q5VWK0 638 aa25.84■■□□□ 1.73
IFT140-208ENST00000566818 RAPGEF4Q8WZA2 1011 aa25.84■■□□□ 1.73
IFT140-208ENST00000566818 NBPF4Q96M43 638 aa25.84■■□□□ 1.73
IFT140-208ENST00000566818 EMILIN1Q9Y6C2 1016 aa25.84■■□□□ 1.73
IFT140-208ENST00000566818 BTAF1O14981 1849 aa25.82■■□□□ 1.72
IFT140-208ENST00000566818 USHBP1Q8N6Y0 703 aa25.82■■□□□ 1.72
IFT140-208ENST00000566818 ZCRB1Q8TBF4 217 aaKnown RBP25.82■■□□□ 1.72
IFT140-208ENST00000566818 SHANK3Q9BYB0 1731 aa25.82■■□□□ 1.72
IFT140-208ENST00000566818 NSD2O96028 1365 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms