RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 PSDA5PKW4 1024 aaPredicted RBP39.19■■■■□ 3.86
UBFD1-206ENST00000566669 OVOS2A0A0G2JMS6 1433 aa39.18■■■■□ 3.86
UBFD1-206ENST00000566669 OVOS2A0A0J9YW53 1432 aa39.18■■■■□ 3.86
UBFD1-206ENST00000566669 OVOS2Q6IE36 1432 aa39.18■■■■□ 3.86
UBFD1-206ENST00000566669 COL18A1P39060 1754 aa39.18■■■■□ 3.86
UBFD1-206ENST00000566669 DDB1Q16531 1140 aa39.17■■■■□ 3.86
UBFD1-206ENST00000566669 HDGFL2Q7Z4V5 671 aaPredicted RBP39.17■■■■□ 3.86
UBFD1-206ENST00000566669 AXIN2Q9Y2T1 843 aa39.16■■■■□ 3.86
UBFD1-206ENST00000566669 USP31Q70CQ4 1352 aa39.16■■■■□ 3.86
UBFD1-206ENST00000566669 TERF2IPQ9NYB0 399 aa39.14■■■■□ 3.86
UBFD1-206ENST00000566669 MON2Q7Z3U7 1717 aa39.14■■■■□ 3.86
UBFD1-206ENST00000566669 CARD10Q9BWT7 1032 aa39.13■■■■□ 3.85
UBFD1-206ENST00000566669 R3HDM1Q15032 1099 aaKnown RBP39.12■■■■□ 3.85
UBFD1-206ENST00000566669 NFAT5O94916 1531 aa39.11■■■■□ 3.85
UBFD1-206ENST00000566669 CSB-PGBD3P0DP91 1061 aa39.11■■■■□ 3.85
UBFD1-206ENST00000566669 TMC1Q8TDI8 760 aa39.11■■■■□ 3.85
UBFD1-206ENST00000566669 TRIM26Q12899 539 aaPredicted RBP39.1■■■■□ 3.85
UBFD1-206ENST00000566669 NBPF14Q5TI25 921 aa39.1■■■■□ 3.85
UBFD1-206ENST00000566669 NINLQ9Y2I6 1382 aa39.09■■■■□ 3.85
UBFD1-206ENST00000566669 EDC4Q6P2E9 1401 aaKnown RBP39.08■■■■□ 3.85
UBFD1-206ENST00000566669 SOX12O15370 315 aa39.08■■■■□ 3.85
UBFD1-206ENST00000566669 CCDC7Q96M83 1385 aa39.08■■■■□ 3.85
UBFD1-206ENST00000566669 SUGP2Q8IX01 1082 aaKnown RBP eCLIP39.07■■■■□ 3.85
UBFD1-206ENST00000566669 BCL9O00512 1426 aa39.06■■■■□ 3.84
UBFD1-206ENST00000566669 CD163L1Q9NR16 1453 aa39.06■■■■□ 3.84
UBFD1-206ENST00000566669 USP54Q70EL1 1684 aa39.06■■■■□ 3.84
UBFD1-206ENST00000566669 LRRC37A3O60309 1634 aa39.05■■■■□ 3.84
UBFD1-206ENST00000566669 SLC12A5Q9H2X9 1139 aa39.03■■■■□ 3.84
UBFD1-206ENST00000566669 RREB1Q92766 1687 aa39.03■■■■□ 3.84
UBFD1-206ENST00000566669 PEAK1Q9H792 1746 aa39.02■■■■□ 3.84
UBFD1-206ENST00000566669 PLSCR1O15162 318 aa39.01■■■■□ 3.84
UBFD1-206ENST00000566669 BCL11BQ9C0K0 894 aaPredicted RBP39.01■■■■□ 3.84
UBFD1-206ENST00000566669 NME9Q86XW9 330 aa39■■■■□ 3.83
UBFD1-206ENST00000566669 WNK3Q9BYP7 1800 aa38.98■■■■□ 3.83
UBFD1-206ENST00000566669 EXOC5O00471 708 aa38.98■■■■□ 3.83
UBFD1-206ENST00000566669 A0A1W2PP64 1363 aa38.96■■■■□ 3.83
UBFD1-206ENST00000566669 RGPD3A6NKT7 1758 aaPredicted RBP38.95■■■■□ 3.83
UBFD1-206ENST00000566669 RGPD4Q7Z3J3 1758 aa38.95■■■■□ 3.83
UBFD1-206ENST00000566669 TESK2Q96S53 571 aa38.95■■■■□ 3.83
UBFD1-206ENST00000566669 ERBB3P21860 1342 aa38.94■■■■□ 3.82
UBFD1-206ENST00000566669 ST20-MTHFSA0A0A6YYL1 179 aa38.94■■■■□ 3.82
UBFD1-206ENST00000566669 MARCH10Q8NA82 808 aaPredicted RBP38.94■■■■□ 3.82
UBFD1-206ENST00000566669 NUP188Q5SRE5 1749 aa38.93■■■■□ 3.82
UBFD1-206ENST00000566669 RGPD5Q99666 1765 aa38.93■■■■□ 3.82
UBFD1-206ENST00000566669 TNS2Q63HR2 1409 aa38.89■■■■□ 3.82
UBFD1-206ENST00000566669 NLRP2Q9NX02 1062 aa38.88■■■■□ 3.81
UBFD1-206ENST00000566669 SBF2Q86WG5 1849 aa38.88■■■■□ 3.81
UBFD1-206ENST00000566669 IL2RBP14784 551 aa38.83■■■■□ 3.81
UBFD1-206ENST00000566669 ANKRD24Q8TF21 1146 aa38.83■■■■□ 3.81
UBFD1-206ENST00000566669 COG3Q96JB2 828 aa38.83■■■■□ 3.81
UBFD1-206ENST00000566669 LTN1O94822 1766 aa38.82■■■■□ 3.81
UBFD1-206ENST00000566669 TMF1P82094 1093 aa38.82■■■■□ 3.8
UBFD1-206ENST00000566669 CDCA8Q53HL2 280 aa38.81■■■■□ 3.8
UBFD1-206ENST00000566669 IP6K1Q92551 441 aa38.81■■■■□ 3.8
UBFD1-206ENST00000566669 TIMELESSQ9UNS1 1208 aa38.8■■■■□ 3.8
UBFD1-206ENST00000566669 ANKRD36BQ8N2N9 1353 aa38.8■■■■□ 3.8
UBFD1-206ENST00000566669 SPON1Q9HCB6 807 aa38.77■■■■□ 3.8
UBFD1-206ENST00000566669 USP47Q96K76 1375 aa38.76■■■■□ 3.8
UBFD1-206ENST00000566669 KCNQ2O43526 872 aa38.72■■■■□ 3.79
UBFD1-206ENST00000566669 CLSPNQ9HAW4 1339 aa38.71■■■■□ 3.79
UBFD1-206ENST00000566669 PTF1AQ7RTS3 328 aa38.71■■■■□ 3.79
UBFD1-206ENST00000566669 FAM208AQ9UK61 1670 aaKnown RBP38.71■■■■□ 3.79
UBFD1-206ENST00000566669 TXNRD1Q16881 649 aa38.69■■■■□ 3.78
UBFD1-206ENST00000566669 PROM2Q8N271 834 aa38.68■■■■□ 3.78
UBFD1-206ENST00000566669 AMPHP49418 695 aa38.66■■■■□ 3.78
UBFD1-206ENST00000566669 PPP1R1BQ9UD71 204 aaPredicted RBP38.66■■■■□ 3.78
UBFD1-206ENST00000566669 RTL1A6NKG5 1358 aa38.66■■■■□ 3.78
UBFD1-206ENST00000566669 MAP3K19Q56UN5 1328 aa38.65■■■■□ 3.78
UBFD1-206ENST00000566669 NHSQ6T4R5 1651 aa38.65■■■■□ 3.78
UBFD1-206ENST00000566669 STK32BQ9NY57 414 aa38.65■■■■□ 3.78
UBFD1-206ENST00000566669 HOXC9P31274 260 aa38.64■■■■□ 3.78
UBFD1-206ENST00000566669 ANO8Q9HCE9 1232 aaPredicted RBP38.63■■■■□ 3.77
UBFD1-206ENST00000566669 FYB1O15117 783 aa38.59■■■■□ 3.77
UBFD1-206ENST00000566669 LTV1Q96GA3 475 aaPredicted RBP38.59■■■■□ 3.77
UBFD1-206ENST00000566669 SLC15A2Q16348 729 aa38.57■■■■□ 3.76
UBFD1-206ENST00000566669 ACSBG1Q96GR2 724 aa38.57■■■■□ 3.76
UBFD1-206ENST00000566669 KIF24Q5T7B8 1368 aa38.54■■■■□ 3.76
UBFD1-206ENST00000566669 SMG6Q86US8 1419 aaKnown RBP38.54■■■■□ 3.76
UBFD1-206ENST00000566669 DCAF8L1A6NGE4 600 aa38.53■■■■□ 3.76
UBFD1-206ENST00000566669 CGNL1Q0VF96 1302 aa38.53■■■■□ 3.76
UBFD1-206ENST00000566669 CASZ1Q86V15 1759 aa38.52■■■■□ 3.76
UBFD1-206ENST00000566669 GGNBP2Q9H3C7 697 aa38.52■■■■□ 3.76
UBFD1-206ENST00000566669 DDX54Q8TDD1 881 aaKnown RBP38.51■■■■□ 3.76
UBFD1-206ENST00000566669 ZCRB1Q8TBF4 217 aaKnown RBP38.47■■■■□ 3.75
UBFD1-206ENST00000566669 RRS1Q15050 365 aaKnown RBP38.46■■■■□ 3.75
UBFD1-206ENST00000566669 SLC27A3Q5K4L6 730 aa38.46■■■■□ 3.75
UBFD1-206ENST00000566669 FBLN1P23142 703 aa38.44■■■■□ 3.74
UBFD1-206ENST00000566669 MTFR1LQ9H019 292 aa38.44■■■■□ 3.74
UBFD1-206ENST00000566669 BTAF1O14981 1849 aa38.44■■■■□ 3.74
UBFD1-206ENST00000566669 INSRP06213 1382 aa38.44■■■■□ 3.74
UBFD1-206ENST00000566669 FLT4P35916 1363 aa38.44■■■■□ 3.74
UBFD1-206ENST00000566669 ZBTB7AO95365 584 aa38.42■■■■□ 3.74
UBFD1-206ENST00000566669 RAPGEF4Q8WZA2 1011 aa38.42■■■■□ 3.74
UBFD1-206ENST00000566669 NBPF6Q5VWK0 638 aa38.4■■■■□ 3.74
UBFD1-206ENST00000566669 NBPF4Q96M43 638 aa38.4■■■■□ 3.74
UBFD1-206ENST00000566669 PDGFDQ9GZP0 370 aaPredicted RBP38.39■■■■□ 3.74
UBFD1-206ENST00000566669 KIF20BQ96Q89 1820 aa38.39■■■■□ 3.74
UBFD1-206ENST00000566669 HMGB2P26583 209 aaKnown RBP38.38■■■■□ 3.73
UBFD1-206ENST00000566669 PCGF6Q9BYE7 350 aa38.38■■■■□ 3.73
UBFD1-206ENST00000566669 KAT6BQ8WYB5 2073 aa38.38■■■■□ 3.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms