RNA–Protein interactions for RNA: ENST00000566547.1

GGA2-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-206ENST00000566547 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.69■■■□□ 2.66
GGA2-206ENST00000566547 LRRC37A3O60309 1634 aa31.68■■■□□ 2.66
GGA2-206ENST00000566547 KCNH5Q8NCM2 988 aa31.68■■■□□ 2.66
GGA2-206ENST00000566547 NFAT5O94916 1531 aa31.68■■■□□ 2.66
GGA2-206ENST00000566547 TMC1Q8TDI8 760 aa31.67■■■□□ 2.66
GGA2-206ENST00000566547 WDR17Q8IZU2 1322 aa31.67■■■□□ 2.66
GGA2-206ENST00000566547 CD163L1Q9NR16 1453 aa31.66■■■□□ 2.66
GGA2-206ENST00000566547 WNK3Q9BYP7 1800 aa31.66■■■□□ 2.66
GGA2-206ENST00000566547 RREB1Q92766 1687 aa31.64■■■□□ 2.66
GGA2-206ENST00000566547 PEAK1Q9H792 1746 aa31.64■■■□□ 2.66
GGA2-206ENST00000566547 NME9Q86XW9 330 aa31.63■■■□□ 2.65
GGA2-206ENST00000566547 SLC12A5Q9H2X9 1139 aa31.63■■■□□ 2.65
GGA2-206ENST00000566547 CSB-PGBD3P0DP91 1061 aa31.62■■■□□ 2.65
GGA2-206ENST00000566547 DDB1Q16531 1140 aa31.62■■■□□ 2.65
GGA2-206ENST00000566547 NUP188Q5SRE5 1749 aa31.62■■■□□ 2.65
GGA2-206ENST00000566547 OVOS2A0A0G2JMS6 1433 aa31.6■■■□□ 2.65
GGA2-206ENST00000566547 OVOS2A0A0J9YW53 1432 aa31.6■■■□□ 2.65
GGA2-206ENST00000566547 OVOS2Q6IE36 1432 aa31.6■■■□□ 2.65
GGA2-206ENST00000566547 SBF2Q86WG5 1849 aa31.6■■■□□ 2.65
GGA2-206ENST00000566547 PARD3Q8TEW0 1356 aa31.59■■■□□ 2.65
GGA2-206ENST00000566547 USP31Q70CQ4 1352 aa31.56■■■□□ 2.64
GGA2-206ENST00000566547 PTF1AQ7RTS3 328 aa31.56■■■□□ 2.64
GGA2-206ENST00000566547 HDGFL2Q7Z4V5 671 aaPredicted RBP31.56■■■□□ 2.64
GGA2-206ENST00000566547 CARD10Q9BWT7 1032 aa31.56■■■□□ 2.64
GGA2-206ENST00000566547 USP54Q70EL1 1684 aa31.56■■■□□ 2.64
GGA2-206ENST00000566547 MARCH10Q8NA82 808 aaPredicted RBP31.55■■■□□ 2.64
GGA2-206ENST00000566547 LTN1O94822 1766 aa31.55■■■□□ 2.64
GGA2-206ENST00000566547 A0A1W2PP64 1363 aa31.54■■■□□ 2.64
GGA2-206ENST00000566547 ST20-MTHFSA0A0A6YYL1 179 aa31.52■■■□□ 2.64
GGA2-206ENST00000566547 EDC4Q6P2E9 1401 aaKnown RBP31.51■■■□□ 2.64
GGA2-206ENST00000566547 TESK2Q96S53 571 aa31.5■■■□□ 2.63
GGA2-206ENST00000566547 ABCC6O95255 1503 aa31.49■■■□□ 2.63
GGA2-206ENST00000566547 C11orf95C9JLR9 678 aaPredicted RBP31.49■■■□□ 2.63
GGA2-206ENST00000566547 CDCA7Q9BWT1 371 aaPredicted RBP31.49■■■□□ 2.63
GGA2-206ENST00000566547 TERF2IPQ9NYB0 399 aa31.49■■■□□ 2.63
GGA2-206ENST00000566547 NBPF14Q5TI25 921 aa31.47■■■□□ 2.63
GGA2-206ENST00000566547 CCDC7Q96M83 1385 aa31.45■■■□□ 2.63
GGA2-206ENST00000566547 NLRP2Q9NX02 1062 aa31.45■■■□□ 2.63
GGA2-206ENST00000566547 ERBB3P21860 1342 aa31.45■■■□□ 2.62
GGA2-206ENST00000566547 EXOC5O00471 708 aa31.44■■■□□ 2.62
GGA2-206ENST00000566547 PUS7Q96PZ0 661 aaKnown RBP31.44■■■□□ 2.62
GGA2-206ENST00000566547 BCL11BQ9C0K0 894 aaPredicted RBP31.44■■■□□ 2.62
GGA2-206ENST00000566547 RGPD3A6NKT7 1758 aaPredicted RBP31.43■■■□□ 2.62
GGA2-206ENST00000566547 RGPD4Q7Z3J3 1758 aa31.43■■■□□ 2.62
GGA2-206ENST00000566547 PLSCR1O15162 318 aa31.41■■■□□ 2.62
GGA2-206ENST00000566547 ANKRD24Q8TF21 1146 aa31.41■■■□□ 2.62
GGA2-206ENST00000566547 TNS2Q63HR2 1409 aa31.41■■■□□ 2.62
GGA2-206ENST00000566547 BCL9O00512 1426 aa31.39■■■□□ 2.62
GGA2-206ENST00000566547 ANO8Q9HCE9 1232 aaPredicted RBP31.38■■■□□ 2.61
GGA2-206ENST00000566547 PROM2Q8N271 834 aa31.37■■■□□ 2.61
GGA2-206ENST00000566547 KCNQ2O43526 872 aa31.36■■■□□ 2.61
GGA2-206ENST00000566547 FBLN1P23142 703 aa31.36■■■□□ 2.61
GGA2-206ENST00000566547 NINLQ9Y2I6 1382 aa31.35■■■□□ 2.61
GGA2-206ENST00000566547 LTV1Q96GA3 475 aaPredicted RBP31.34■■■□□ 2.61
GGA2-206ENST00000566547 ACSBG1Q96GR2 724 aa31.34■■■□□ 2.61
GGA2-206ENST00000566547 USP47Q96K76 1375 aa31.33■■■□□ 2.61
GGA2-206ENST00000566547 IL2RBP14784 551 aa31.33■■■□□ 2.61
GGA2-206ENST00000566547 IP6K1Q92551 441 aa31.32■■■□□ 2.6
GGA2-206ENST00000566547 COG3Q96JB2 828 aa31.31■■■□□ 2.6
GGA2-206ENST00000566547 NHSQ6T4R5 1651 aa31.3■■■□□ 2.6
GGA2-206ENST00000566547 PDGFDQ9GZP0 370 aaPredicted RBP31.29■■■□□ 2.6
GGA2-206ENST00000566547 KAT6BQ8WYB5 2073 aa31.29■■■□□ 2.6
GGA2-206ENST00000566547 MAP3K19Q56UN5 1328 aa31.28■■■□□ 2.6
GGA2-206ENST00000566547 TXNRD1Q16881 649 aa31.28■■■□□ 2.6
GGA2-206ENST00000566547 ANKRD36BQ8N2N9 1353 aa31.28■■■□□ 2.6
GGA2-206ENST00000566547 TMF1P82094 1093 aa31.27■■■□□ 2.6
GGA2-206ENST00000566547 RGPD2P0DJD1 1756 aa31.26■■■□□ 2.59
GGA2-206ENST00000566547 CASZ1Q86V15 1759 aa31.26■■■□□ 2.59
GGA2-206ENST00000566547 SLC24A1O60721 1099 aa31.26■■■□□ 2.59
GGA2-206ENST00000566547 SPON1Q9HCB6 807 aa31.26■■■□□ 2.59
GGA2-206ENST00000566547 HOXC9P31274 260 aa31.24■■■□□ 2.59
GGA2-206ENST00000566547 GGNBP2Q9H3C7 697 aa31.24■■■□□ 2.59
GGA2-206ENST00000566547 FAM208AQ9UK61 1670 aaKnown RBP31.24■■■□□ 2.59
GGA2-206ENST00000566547 AMPHP49418 695 aa31.23■■■□□ 2.59
GGA2-206ENST00000566547 BTAF1O14981 1849 aa31.22■■■□□ 2.59
GGA2-206ENST00000566547 PPP1R1BQ9UD71 204 aaPredicted RBP31.22■■■□□ 2.59
GGA2-206ENST00000566547 RRS1Q15050 365 aaKnown RBP31.21■■■□□ 2.59
GGA2-206ENST00000566547 FYB1O15117 783 aa31.2■■■□□ 2.59
GGA2-206ENST00000566547 DDX54Q8TDD1 881 aaKnown RBP31.2■■■□□ 2.59
GGA2-206ENST00000566547 STK32BQ9NY57 414 aa31.19■■■□□ 2.58
GGA2-206ENST00000566547 ZBTB7AO95365 584 aa31.18■■■□□ 2.58
GGA2-206ENST00000566547 PCGF6Q9BYE7 350 aa31.17■■■□□ 2.58
GGA2-206ENST00000566547 SLC15A2Q16348 729 aa31.16■■■□□ 2.58
GGA2-206ENST00000566547 KIF20BQ96Q89 1820 aa31.16■■■□□ 2.58
GGA2-206ENST00000566547 CLSPNQ9HAW4 1339 aa31.15■■■□□ 2.58
GGA2-206ENST00000566547 MYOM1P52179 1685 aa31.14■■■□□ 2.58
GGA2-206ENST00000566547 TIMELESSQ9UNS1 1208 aa31.13■■■□□ 2.57
GGA2-206ENST00000566547 ATF5Q9Y2D1 282 aaPredicted RBP31.13■■■□□ 2.57
GGA2-206ENST00000566547 SHANK3Q9BYB0 1731 aa31.12■■■□□ 2.57
GGA2-206ENST00000566547 USHBP1Q8N6Y0 703 aa31.12■■■□□ 2.57
GGA2-206ENST00000566547 MEGF6O75095 1541 aa31.12■■■□□ 2.57
GGA2-206ENST00000566547 PAPPAQ13219 1627 aa31.1■■■□□ 2.57
GGA2-206ENST00000566547 RTL1A6NKG5 1358 aa31.1■■■□□ 2.57
GGA2-206ENST00000566547 CDCA8Q53HL2 280 aa31.1■■■□□ 2.57
GGA2-206ENST00000566547 NBPF6Q5VWK0 638 aa31.1■■■□□ 2.57
GGA2-206ENST00000566547 NBPF4Q96M43 638 aa31.1■■■□□ 2.57
GGA2-206ENST00000566547 CARD14Q9BXL6 1004 aa31.09■■■□□ 2.57
GGA2-206ENST00000566547 DOT1LQ8TEK3 1739 aa31.09■■■□□ 2.57
GGA2-206ENST00000566547 LRRC4BQ9NT99 713 aa31.08■■■□□ 2.57
GGA2-206ENST00000566547 PTGER2P43116 358 aa31.07■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms