RNA–Protein interactions for RNA: ENST00000566434.5

GDPD3-204, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 3

Gene GDPD3, Length 399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-204ENST00000566434 GLI3P10071 1580 aa17.76■□□□□ 0.43
GDPD3-204ENST00000566434 COL18A1P39060 1754 aa17.76■□□□□ 0.43
GDPD3-204ENST00000566434 CDK12Q9NYV4 1490 aaPredicted RBP17.75■□□□□ 0.43
GDPD3-204ENST00000566434 RGS12O14924 1447 aa17.75■□□□□ 0.43
GDPD3-204ENST00000566434 A0A0G2JS52 829 aa17.75■□□□□ 0.43
GDPD3-204ENST00000566434 CSB-PGBD3P0DP91 1061 aa17.75■□□□□ 0.43
GDPD3-204ENST00000566434 MYT1Q01538 1121 aa17.75■□□□□ 0.43
GDPD3-204ENST00000566434 ABCC6O95255 1503 aa17.75■□□□□ 0.43
GDPD3-204ENST00000566434 RGPD5Q99666 1765 aa17.75■□□□□ 0.43
GDPD3-204ENST00000566434 AMPHP49418 695 aa17.73■□□□□ 0.43
GDPD3-204ENST00000566434 LARP1Q6PKG0 1096 aaKnown RBP17.73■□□□□ 0.43
GDPD3-204ENST00000566434 USP35Q9P2H5 1018 aa17.73■□□□□ 0.43
GDPD3-204ENST00000566434 AXIN2Q9Y2T1 843 aa17.73■□□□□ 0.43
GDPD3-204ENST00000566434 NSD2O96028 1365 aa17.73■□□□□ 0.43
GDPD3-204ENST00000566434 SPATA31A5Q5VU36 1347 aa17.72■□□□□ 0.43
GDPD3-204ENST00000566434 SPATA31A7Q8IWB4 1347 aa17.72■□□□□ 0.43
GDPD3-204ENST00000566434 FBLN1P23142 703 aa17.72■□□□□ 0.43
GDPD3-204ENST00000566434 RRS1Q15050 365 aaKnown RBP17.72■□□□□ 0.43
GDPD3-204ENST00000566434 MAP3K19Q56UN5 1328 aa17.72■□□□□ 0.43
GDPD3-204ENST00000566434 TNNT2P45379 298 aaPredicted RBP17.71■□□□□ 0.43
GDPD3-204ENST00000566434 FAM98CQ17RN3 349 aaKnown RBP17.71■□□□□ 0.43
GDPD3-204ENST00000566434 TOM1L2Q6ZVM7 507 aa17.71■□□□□ 0.43
GDPD3-204ENST00000566434 CRB1P82279 1406 aa17.71■□□□□ 0.43
GDPD3-204ENST00000566434 SPATA31A1Q5TZJ5 1347 aa17.71■□□□□ 0.42
GDPD3-204ENST00000566434 MORC1Q86VD1 984 aa17.7■□□□□ 0.42
GDPD3-204ENST00000566434 BLMP54132 1417 aaPredicted RBP17.7■□□□□ 0.42
GDPD3-204ENST00000566434 WDR17Q8IZU2 1322 aa17.7■□□□□ 0.42
GDPD3-204ENST00000566434 RTL1A6NKG5 1358 aa17.69■□□□□ 0.42
GDPD3-204ENST00000566434 CNGB1Q14028 1251 aaPredicted RBP17.69■□□□□ 0.42
GDPD3-204ENST00000566434 IP6K1Q92551 441 aa17.69■□□□□ 0.42
GDPD3-204ENST00000566434 LTV1Q96GA3 475 aaPredicted RBP17.69■□□□□ 0.42
GDPD3-204ENST00000566434 PPM1GO15355 546 aaPredicted RBP17.68■□□□□ 0.42
GDPD3-204ENST00000566434 HOXC9P31274 260 aa17.68■□□□□ 0.42
GDPD3-204ENST00000566434 SEPT12Q8IYM1 358 aa17.68■□□□□ 0.42
GDPD3-204ENST00000566434 ANKRD24Q8TF21 1146 aa17.68■□□□□ 0.42
GDPD3-204ENST00000566434 CC2D1BQ5T0F9 858 aaKnown RBP17.67■□□□□ 0.42
GDPD3-204ENST00000566434 TCP11L2Q8N4U5 519 aa17.67■□□□□ 0.42
GDPD3-204ENST00000566434 ERBB3P21860 1342 aa17.67■□□□□ 0.42
GDPD3-204ENST00000566434 MAP2P11137 1827 aaKnown RBP17.66■□□□□ 0.42
GDPD3-204ENST00000566434 AMER1Q5JTC6 1135 aaPredicted RBP17.66■□□□□ 0.42
GDPD3-204ENST00000566434 NLRP2Q9NX02 1062 aa17.66■□□□□ 0.42
GDPD3-204ENST00000566434 EMILIN1Q9Y6C2 1016 aa17.66■□□□□ 0.42
GDPD3-204ENST00000566434 FLT4P35916 1363 aa17.66■□□□□ 0.42
GDPD3-204ENST00000566434 SMG6Q86US8 1419 aaKnown RBP17.65■□□□□ 0.42
GDPD3-204ENST00000566434 PEAK1Q9H792 1746 aa17.65■□□□□ 0.42
GDPD3-204ENST00000566434 PER1O15534 1290 aaPredicted RBP17.65■□□□□ 0.42
GDPD3-204ENST00000566434 FAM208AQ9UK61 1670 aaKnown RBP17.64■□□□□ 0.42
GDPD3-204ENST00000566434 BRWD3Q6RI45 1802 aa17.64■□□□□ 0.41
GDPD3-204ENST00000566434 SOCS7O14512 581 aa17.64■□□□□ 0.41
GDPD3-204ENST00000566434 THRAP3Q9Y2W1 955 aaKnown RBP17.64■□□□□ 0.41
GDPD3-204ENST00000566434 THSD7AQ9UPZ6 1657 aa17.64■□□□□ 0.41
GDPD3-204ENST00000566434 KIF24Q5T7B8 1368 aa17.64■□□□□ 0.41
GDPD3-204ENST00000566434 BARGINQ6ZT62 677 aa17.63■□□□□ 0.41
GDPD3-204ENST00000566434 CARD10Q9BWT7 1032 aa17.63■□□□□ 0.41
GDPD3-204ENST00000566434 ONECUT3O60422 494 aaPredicted RBP17.62■□□□□ 0.41
GDPD3-204ENST00000566434 WNK3Q9BYP7 1800 aa17.62■□□□□ 0.41
GDPD3-204ENST00000566434 HSP90AB2PQ58FF8 381 aa17.61■□□□□ 0.41
GDPD3-204ENST00000566434 POLKQ9UBT6 870 aa17.61■□□□□ 0.41
GDPD3-204ENST00000566434 INSRP06213 1382 aa17.61■□□□□ 0.41
GDPD3-204ENST00000566434 KRT27Q7Z3Y8 459 aa17.6■□□□□ 0.41
GDPD3-204ENST00000566434 NPC1L1Q9UHC9 1359 aa17.6■□□□□ 0.41
GDPD3-204ENST00000566434 DDX10Q13206 875 aaKnown RBP17.59■□□□□ 0.41
GDPD3-204ENST00000566434 RGPD2P0DJD1 1756 aa17.58■□□□□ 0.41
GDPD3-204ENST00000566434 PARP4Q9UKK3 1724 aaKnown RBP17.58■□□□□ 0.41
GDPD3-204ENST00000566434 PDE3BQ13370 1112 aa17.58■□□□□ 0.4
GDPD3-204ENST00000566434 CDCA7Q9BWT1 371 aaPredicted RBP17.58■□□□□ 0.4
GDPD3-204ENST00000566434 LRRC37A3O60309 1634 aa17.57■□□□□ 0.4
GDPD3-204ENST00000566434 IL2RBP14784 551 aa17.55■□□□□ 0.4
GDPD3-204ENST00000566434 DDB1Q16531 1140 aa17.55■□□□□ 0.4
GDPD3-204ENST00000566434 USHBP1Q8N6Y0 703 aa17.55■□□□□ 0.4
GDPD3-204ENST00000566434 DISP2A7MBM2 1401 aa17.54■□□□□ 0.4
GDPD3-204ENST00000566434 ZNF316A6NFI3 1004 aaPredicted RBP17.53■□□□□ 0.4
GDPD3-204ENST00000566434 FAM182BQ5T319 152 aa17.53■□□□□ 0.4
GDPD3-204ENST00000566434 NBPF6Q5VWK0 638 aa17.53■□□□□ 0.4
GDPD3-204ENST00000566434 NBPF4Q96M43 638 aa17.53■□□□□ 0.4
GDPD3-204ENST00000566434 EXOC5O00471 708 aa17.52■□□□□ 0.4
GDPD3-204ENST00000566434 MTHFSP49914 203 aa17.52■□□□□ 0.4
GDPD3-204ENST00000566434 EIF4A2Q14240 407 aaKnown RBP17.52■□□□□ 0.4
GDPD3-204ENST00000566434 TNS2Q63HR2 1409 aa17.51■□□□□ 0.39
GDPD3-204ENST00000566434 RAPGEF4Q8WZA2 1011 aa17.51■□□□□ 0.39
GDPD3-204ENST00000566434 UPF1Q92900 1129 aaKnown RBP eCLIP17.51■□□□□ 0.39
GDPD3-204ENST00000566434 OVOS2A0A0G2JMS6 1433 aa17.48■□□□□ 0.39
GDPD3-204ENST00000566434 MEGF6O75095 1541 aa17.48■□□□□ 0.39
GDPD3-204ENST00000566434 TATP17735 454 aaPredicted RBP17.48■□□□□ 0.39
GDPD3-204ENST00000566434 FAM196AQ6ZSG2 479 aa17.48■□□□□ 0.39
GDPD3-204ENST00000566434 EYA1Q99502 592 aa17.48■□□□□ 0.39
GDPD3-204ENST00000566434 SF3B2Q13435 895 aaKnown RBP17.47■□□□□ 0.39
GDPD3-204ENST00000566434 CFAP53Q96M91 514 aa17.47■□□□□ 0.39
GDPD3-204ENST00000566434 PPP2R1AP30153 589 aa17.46■□□□□ 0.39
GDPD3-204ENST00000566434 RGPD1P0DJD0 1748 aa17.45■□□□□ 0.38
GDPD3-204ENST00000566434 DIAPH1O60610 1272 aaKnown RBP17.45■□□□□ 0.38
GDPD3-204ENST00000566434 DDX54Q8TDD1 881 aaKnown RBP17.45■□□□□ 0.38
GDPD3-204ENST00000566434 IGSF1Q8N6C5 1336 aa17.45■□□□□ 0.38
GDPD3-204ENST00000566434 PARD3Q8TEW0 1356 aa17.44■□□□□ 0.38
GDPD3-204ENST00000566434 CCDC125Q86Z20 511 aa17.44■□□□□ 0.38
GDPD3-204ENST00000566434 MARCH10Q8NA82 808 aaPredicted RBP17.44■□□□□ 0.38
GDPD3-204ENST00000566434 ZCRB1Q8TBF4 217 aaKnown RBP17.44■□□□□ 0.38
GDPD3-204ENST00000566434 NCAPD2Q15021 1401 aa17.44■□□□□ 0.38
GDPD3-204ENST00000566434 IL13P35225 146 aa17.43■□□□□ 0.38
GDPD3-204ENST00000566434 TRIM37O94972 964 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms