RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 EDC4Q6P2E9 1401 aaKnown RBP20.64■□□□□ 0.89
FANCA-220ENST00000566409 TERF2IPQ9NYB0 399 aa20.63■□□□□ 0.89
FANCA-220ENST00000566409 PARP4Q9UKK3 1724 aaKnown RBP20.62■□□□□ 0.89
FANCA-220ENST00000566409 THRAP3Q9Y2W1 955 aaKnown RBP20.62■□□□□ 0.89
FANCA-220ENST00000566409 RGPD1P0DJD0 1748 aa20.61■□□□□ 0.89
FANCA-220ENST00000566409 SLC24A1O60721 1099 aa20.61■□□□□ 0.89
FANCA-220ENST00000566409 SF3B2Q13435 895 aaKnown RBP20.61■□□□□ 0.89
FANCA-220ENST00000566409 TNS1Q9HBL0 1735 aaKnown RBP20.61■□□□□ 0.89
FANCA-220ENST00000566409 NINLQ9Y2I6 1382 aa20.6■□□□□ 0.89
FANCA-220ENST00000566409 WDR17Q8IZU2 1322 aa20.6■□□□□ 0.89
FANCA-220ENST00000566409 LTN1O94822 1766 aa20.6■□□□□ 0.89
FANCA-220ENST00000566409 TOM1L2Q6ZVM7 507 aa20.59■□□□□ 0.89
FANCA-220ENST00000566409 OVOS2A0A0J9YW53 1432 aa20.59■□□□□ 0.89
FANCA-220ENST00000566409 OVOS2Q6IE36 1432 aa20.59■□□□□ 0.89
FANCA-220ENST00000566409 WNK3Q9BYP7 1800 aa20.58■□□□□ 0.89
FANCA-220ENST00000566409 TMF1P82094 1093 aa20.58■□□□□ 0.89
FANCA-220ENST00000566409 FAM196AQ6ZSG2 479 aa20.58■□□□□ 0.89
FANCA-220ENST00000566409 PDE3BQ13370 1112 aa20.57■□□□□ 0.88
FANCA-220ENST00000566409 ABCC6O95255 1503 aa20.57■□□□□ 0.88
FANCA-220ENST00000566409 LRRC37A3O60309 1634 aa20.56■□□□□ 0.88
FANCA-220ENST00000566409 TRIM37O94972 964 aa20.55■□□□□ 0.88
FANCA-220ENST00000566409 BAG6P46379 1132 aa20.55■□□□□ 0.88
FANCA-220ENST00000566409 EN1Q05925 392 aaPredicted RBP20.55■□□□□ 0.88
FANCA-220ENST00000566409 ANKRD36BQ8N2N9 1353 aa20.55■□□□□ 0.88
FANCA-220ENST00000566409 PEAK1Q9H792 1746 aa20.55■□□□□ 0.88
FANCA-220ENST00000566409 CCER1Q8TC90 406 aaPredicted RBP20.54■□□□□ 0.88
FANCA-220ENST00000566409 CARD10Q9BWT7 1032 aa20.54■□□□□ 0.88
FANCA-220ENST00000566409 DISP2A7MBM2 1401 aa20.53■□□□□ 0.88
FANCA-220ENST00000566409 CSB-PGBD3P0DP91 1061 aa20.52■□□□□ 0.88
FANCA-220ENST00000566409 MYOM1P52179 1685 aa20.51■□□□□ 0.87
FANCA-220ENST00000566409 SBF2Q86WG5 1849 aa20.51■□□□□ 0.87
FANCA-220ENST00000566409 FBLN1P23142 703 aa20.51■□□□□ 0.87
FANCA-220ENST00000566409 ERBB3P21860 1342 aa20.51■□□□□ 0.87
FANCA-220ENST00000566409 DDB1Q16531 1140 aa20.5■□□□□ 0.87
FANCA-220ENST00000566409 EZH2Q15910 746 aaKnown RBP20.49■□□□□ 0.87
FANCA-220ENST00000566409 CAMKK2Q96RR4 588 aa20.49■□□□□ 0.87
FANCA-220ENST00000566409 FYB1O15117 783 aa20.48■□□□□ 0.87
FANCA-220ENST00000566409 MARCH10Q8NA82 808 aaPredicted RBP20.48■□□□□ 0.87
FANCA-220ENST00000566409 COG3Q96JB2 828 aa20.48■□□□□ 0.87
FANCA-220ENST00000566409 APBA3O96018 575 aa20.47■□□□□ 0.87
FANCA-220ENST00000566409 CDCA8Q53HL2 280 aa20.47■□□□□ 0.87
FANCA-220ENST00000566409 ANKRD24Q8TF21 1146 aa20.47■□□□□ 0.87
FANCA-220ENST00000566409 CDCA7Q9BWT1 371 aaPredicted RBP20.47■□□□□ 0.87
FANCA-220ENST00000566409 CCDC7Q96M83 1385 aa20.46■□□□□ 0.87
FANCA-220ENST00000566409 OVOS2A0A0G2JMS6 1433 aa20.46■□□□□ 0.87
FANCA-220ENST00000566409 IP6K1Q92551 441 aa20.46■□□□□ 0.87
FANCA-220ENST00000566409 CARD14Q9BXL6 1004 aa20.46■□□□□ 0.87
FANCA-220ENST00000566409 MAP3K19Q56UN5 1328 aa20.46■□□□□ 0.87
FANCA-220ENST00000566409 GGNBP2Q9H3C7 697 aa20.45■□□□□ 0.86
FANCA-220ENST00000566409 NLRP2Q9NX02 1062 aa20.45■□□□□ 0.86
FANCA-220ENST00000566409 KIF20BQ96Q89 1820 aa20.45■□□□□ 0.86
FANCA-220ENST00000566409 PTF1AQ7RTS3 328 aa20.44■□□□□ 0.86
FANCA-220ENST00000566409 RREB1Q92766 1687 aa20.43■□□□□ 0.86
FANCA-220ENST00000566409 PSDA5PKW4 1024 aaPredicted RBP20.43■□□□□ 0.86
FANCA-220ENST00000566409 RGPD2P0DJD1 1756 aa20.42■□□□□ 0.86
FANCA-220ENST00000566409 C11orf95C9JLR9 678 aaPredicted RBP20.41■□□□□ 0.86
FANCA-220ENST00000566409 EXOC5O00471 708 aa20.41■□□□□ 0.86
FANCA-220ENST00000566409 HOXC9P31274 260 aa20.41■□□□□ 0.86
FANCA-220ENST00000566409 BCL9O00512 1426 aa20.41■□□□□ 0.86
FANCA-220ENST00000566409 NUP188Q5SRE5 1749 aa20.41■□□□□ 0.86
FANCA-220ENST00000566409 HSPA5P11021 654 aaKnown RBP20.4■□□□□ 0.86
FANCA-220ENST00000566409 RRS1Q15050 365 aaKnown RBP20.4■□□□□ 0.86
FANCA-220ENST00000566409 PARD3Q8TEW0 1356 aa20.4■□□□□ 0.86
FANCA-220ENST00000566409 LTV1Q96GA3 475 aaPredicted RBP20.4■□□□□ 0.86
FANCA-220ENST00000566409 FAM208AQ9UK61 1670 aaKnown RBP20.39■□□□□ 0.86
FANCA-220ENST00000566409 TNS2Q63HR2 1409 aa20.39■□□□□ 0.85
FANCA-220ENST00000566409 NSD3Q9BZ95 1437 aa20.39■□□□□ 0.85
FANCA-220ENST00000566409 EIF4G2P78344 907 aaKnown RBP eCLIP20.39■□□□□ 0.85
FANCA-220ENST00000566409 IL2RBP14784 551 aa20.38■□□□□ 0.85
FANCA-220ENST00000566409 AMPHP49418 695 aa20.38■□□□□ 0.85
FANCA-220ENST00000566409 R3HDM1Q15032 1099 aaKnown RBP20.37■□□□□ 0.85
FANCA-220ENST00000566409 BCL11BQ9C0K0 894 aaPredicted RBP20.37■□□□□ 0.85
FANCA-220ENST00000566409 RGPD3A6NKT7 1758 aaPredicted RBP20.36■□□□□ 0.85
FANCA-220ENST00000566409 RGPD4Q7Z3J3 1758 aa20.36■□□□□ 0.85
FANCA-220ENST00000566409 RTL1A6NKG5 1358 aa20.34■□□□□ 0.85
FANCA-220ENST00000566409 PLSCR1O15162 318 aa20.34■□□□□ 0.85
FANCA-220ENST00000566409 POLR3GLQ9BT43 218 aa20.34■□□□□ 0.85
FANCA-220ENST00000566409 KAT6BQ8WYB5 2073 aa20.34■□□□□ 0.85
FANCA-220ENST00000566409 KCNQ2O43526 872 aa20.33■□□□□ 0.85
FANCA-220ENST00000566409 PROM2Q8N271 834 aa20.33■□□□□ 0.85
FANCA-220ENST00000566409 LRP5O75197 1615 aa20.32■□□□□ 0.84
FANCA-220ENST00000566409 HSP90AB2PQ58FF8 381 aa20.32■□□□□ 0.84
FANCA-220ENST00000566409 NBPF6Q5VWK0 638 aa20.31■□□□□ 0.84
FANCA-220ENST00000566409 NBPF4Q96M43 638 aa20.31■□□□□ 0.84
FANCA-220ENST00000566409 NHSQ6T4R5 1651 aa20.31■□□□□ 0.84
FANCA-220ENST00000566409 MAP2P11137 1827 aaKnown RBP20.3■□□□□ 0.84
FANCA-220ENST00000566409 SHANK3Q9BYB0 1731 aa20.3■□□□□ 0.84
FANCA-220ENST00000566409 ACSBG1Q96GR2 724 aa20.29■□□□□ 0.84
FANCA-220ENST00000566409 EMILIN1Q9Y6C2 1016 aa20.29■□□□□ 0.84
FANCA-220ENST00000566409 INSRP06213 1382 aa20.29■□□□□ 0.84
FANCA-220ENST00000566409 MEGF6O75095 1541 aa20.28■□□□□ 0.84
FANCA-220ENST00000566409 ANKRD26Q9UPS8 1709 aa20.28■□□□□ 0.84
FANCA-220ENST00000566409 FLT4P35916 1363 aa20.28■□□□□ 0.84
FANCA-220ENST00000566409 CGNL1Q0VF96 1302 aa20.27■□□□□ 0.84
FANCA-220ENST00000566409 KIF24Q5T7B8 1368 aa20.27■□□□□ 0.84
FANCA-220ENST00000566409 USHBP1Q8N6Y0 703 aa20.27■□□□□ 0.84
FANCA-220ENST00000566409 PANK3Q9H999 370 aa20.27■□□□□ 0.84
FANCA-220ENST00000566409 BTAF1O14981 1849 aa20.27■□□□□ 0.84
FANCA-220ENST00000566409 NBPF14Q5TI25 921 aa20.26■□□□□ 0.83
FANCA-220ENST00000566409 DDX54Q8TDD1 881 aaKnown RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms