RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 KCNH5Q8NCM2 988 aa23.59■■□□□ 1.37
TSR3-202ENST00000566296 PEAK1Q9H792 1746 aa23.59■■□□□ 1.37
TSR3-202ENST00000566296 WDR17Q8IZU2 1322 aa23.59■■□□□ 1.37
TSR3-202ENST00000566296 DDB1Q16531 1140 aa23.58■■□□□ 1.37
TSR3-202ENST00000566296 RGPD3A6NKT7 1758 aaPredicted RBP23.57■■□□□ 1.36
TSR3-202ENST00000566296 RGPD4Q7Z3J3 1758 aa23.57■■□□□ 1.36
TSR3-202ENST00000566296 MON2Q7Z3U7 1717 aa23.56■■□□□ 1.36
TSR3-202ENST00000566296 SOX12O15370 315 aa23.56■■□□□ 1.36
TSR3-202ENST00000566296 SBF2Q86WG5 1849 aa23.56■■□□□ 1.36
TSR3-202ENST00000566296 RGPD5Q99666 1765 aa23.55■■□□□ 1.36
TSR3-202ENST00000566296 KTN1Q86UP2 1357 aaKnown RBP23.55■■□□□ 1.36
TSR3-202ENST00000566296 CSB-PGBD3P0DP91 1061 aa23.55■■□□□ 1.36
TSR3-202ENST00000566296 CDCA7Q9BWT1 371 aaPredicted RBP23.55■■□□□ 1.36
TSR3-202ENST00000566296 SBNO2Q9Y2G9 1366 aa23.54■■□□□ 1.36
TSR3-202ENST00000566296 ARHGEF25Q86VW2 580 aa23.54■■□□□ 1.36
TSR3-202ENST00000566296 NFAT5O94916 1531 aa23.54■■□□□ 1.36
TSR3-202ENST00000566296 ABCC6O95255 1503 aa23.54■■□□□ 1.36
TSR3-202ENST00000566296 AXIN2Q9Y2T1 843 aa23.53■■□□□ 1.36
TSR3-202ENST00000566296 CARD11Q9BXL7 1154 aa23.5■■□□□ 1.35
TSR3-202ENST00000566296 USP54Q70EL1 1684 aa23.49■■□□□ 1.35
TSR3-202ENST00000566296 CARD10Q9BWT7 1032 aa23.49■■□□□ 1.35
TSR3-202ENST00000566296 CCDC7Q96M83 1385 aa23.49■■□□□ 1.35
TSR3-202ENST00000566296 BCL11BQ9C0K0 894 aaPredicted RBP23.47■■□□□ 1.35
TSR3-202ENST00000566296 BCL9O00512 1426 aa23.47■■□□□ 1.35
TSR3-202ENST00000566296 PLSCR1O15162 318 aa23.46■■□□□ 1.35
TSR3-202ENST00000566296 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.46■■□□□ 1.35
TSR3-202ENST00000566296 USP31Q70CQ4 1352 aa23.45■■□□□ 1.34
TSR3-202ENST00000566296 TONSLQ96HA7 1378 aa23.45■■□□□ 1.34
TSR3-202ENST00000566296 MARCH10Q8NA82 808 aaPredicted RBP23.45■■□□□ 1.34
TSR3-202ENST00000566296 TNS2Q63HR2 1409 aa23.44■■□□□ 1.34
TSR3-202ENST00000566296 HDGFL2Q7Z4V5 671 aaPredicted RBP23.44■■□□□ 1.34
TSR3-202ENST00000566296 TMC1Q8TDI8 760 aa23.44■■□□□ 1.34
TSR3-202ENST00000566296 SPON1Q9HCB6 807 aa23.44■■□□□ 1.34
TSR3-202ENST00000566296 PPP1R1BQ9UD71 204 aaPredicted RBP23.44■■□□□ 1.34
TSR3-202ENST00000566296 LTN1O94822 1766 aa23.44■■□□□ 1.34
TSR3-202ENST00000566296 CD163L1Q9NR16 1453 aa23.43■■□□□ 1.34
TSR3-202ENST00000566296 EXOC5O00471 708 aa23.42■■□□□ 1.34
TSR3-202ENST00000566296 NME9Q86XW9 330 aa23.41■■□□□ 1.34
TSR3-202ENST00000566296 EDC4Q6P2E9 1401 aaKnown RBP23.41■■□□□ 1.34
TSR3-202ENST00000566296 KCNQ2O43526 872 aa23.4■■□□□ 1.34
TSR3-202ENST00000566296 ERBB3P21860 1342 aa23.39■■□□□ 1.34
TSR3-202ENST00000566296 PTF1AQ7RTS3 328 aa23.39■■□□□ 1.33
TSR3-202ENST00000566296 ANO8Q9HCE9 1232 aaPredicted RBP23.39■■□□□ 1.33
TSR3-202ENST00000566296 TRIM26Q12899 539 aaPredicted RBP23.38■■□□□ 1.33
TSR3-202ENST00000566296 TERF2IPQ9NYB0 399 aa23.38■■□□□ 1.33
TSR3-202ENST00000566296 CASZ1Q86V15 1759 aa23.37■■□□□ 1.33
TSR3-202ENST00000566296 NLRP2Q9NX02 1062 aa23.37■■□□□ 1.33
TSR3-202ENST00000566296 NHSQ6T4R5 1651 aa23.37■■□□□ 1.33
TSR3-202ENST00000566296 A0A1W2PP64 1363 aa23.37■■□□□ 1.33
TSR3-202ENST00000566296 NINLQ9Y2I6 1382 aa23.37■■□□□ 1.33
TSR3-202ENST00000566296 SLC12A5Q9H2X9 1139 aa23.36■■□□□ 1.33
TSR3-202ENST00000566296 PUS7Q96PZ0 661 aaKnown RBP23.34■■□□□ 1.33
TSR3-202ENST00000566296 IL2RBP14784 551 aa23.33■■□□□ 1.33
TSR3-202ENST00000566296 TXNRD1Q16881 649 aa23.33■■□□□ 1.33
TSR3-202ENST00000566296 ANKRD24Q8TF21 1146 aa23.33■■□□□ 1.33
TSR3-202ENST00000566296 STK32BQ9NY57 414 aa23.33■■□□□ 1.33
TSR3-202ENST00000566296 DCAF8L1A6NGE4 600 aa23.32■■□□□ 1.32
TSR3-202ENST00000566296 KAT6BQ8WYB5 2073 aa23.32■■□□□ 1.32
TSR3-202ENST00000566296 FAM208AQ9UK61 1670 aaKnown RBP23.32■■□□□ 1.32
TSR3-202ENST00000566296 PROM2Q8N271 834 aa23.31■■□□□ 1.32
TSR3-202ENST00000566296 ACSBG1Q96GR2 724 aa23.29■■□□□ 1.32
TSR3-202ENST00000566296 BTAF1O14981 1849 aa23.27■■□□□ 1.32
TSR3-202ENST00000566296 ZBTB7AO95365 584 aa23.27■■□□□ 1.32
TSR3-202ENST00000566296 SLC24A1O60721 1099 aa23.26■■□□□ 1.31
TSR3-202ENST00000566296 SLC15A2Q16348 729 aa23.26■■□□□ 1.31
TSR3-202ENST00000566296 MYOM1P52179 1685 aa23.25■■□□□ 1.31
TSR3-202ENST00000566296 YY1P25490 414 aa23.25■■□□□ 1.31
TSR3-202ENST00000566296 ST20-MTHFSA0A0A6YYL1 179 aa23.24■■□□□ 1.31
TSR3-202ENST00000566296 IP6K1Q92551 441 aa23.24■■□□□ 1.31
TSR3-202ENST00000566296 COG3Q96JB2 828 aa23.24■■□□□ 1.31
TSR3-202ENST00000566296 TESK2Q96S53 571 aa23.24■■□□□ 1.31
TSR3-202ENST00000566296 PDGFDQ9GZP0 370 aaPredicted RBP23.24■■□□□ 1.31
TSR3-202ENST00000566296 LTV1Q96GA3 475 aaPredicted RBP23.23■■□□□ 1.31
TSR3-202ENST00000566296 PAPPAQ13219 1627 aa23.22■■□□□ 1.31
TSR3-202ENST00000566296 ATF5Q9Y2D1 282 aaPredicted RBP23.21■■□□□ 1.31
TSR3-202ENST00000566296 ANKRD36BQ8N2N9 1353 aa23.21■■□□□ 1.31
TSR3-202ENST00000566296 MTFR1LQ9H019 292 aa23.2■■□□□ 1.3
TSR3-202ENST00000566296 MAP3K19Q56UN5 1328 aa23.19■■□□□ 1.3
TSR3-202ENST00000566296 AMPHP49418 695 aa23.19■■□□□ 1.3
TSR3-202ENST00000566296 PTGER2P43116 358 aa23.18■■□□□ 1.3
TSR3-202ENST00000566296 RTL1A6NKG5 1358 aa23.17■■□□□ 1.3
TSR3-202ENST00000566296 HOXC9P31274 260 aa23.17■■□□□ 1.3
TSR3-202ENST00000566296 DDX54Q8TDD1 881 aaKnown RBP23.17■■□□□ 1.3
TSR3-202ENST00000566296 USP47Q96K76 1375 aa23.15■■□□□ 1.3
TSR3-202ENST00000566296 TMF1P82094 1093 aa23.15■■□□□ 1.3
TSR3-202ENST00000566296 DOT1LQ8TEK3 1739 aa23.15■■□□□ 1.3
TSR3-202ENST00000566296 RGPD2P0DJD1 1756 aa23.14■■□□□ 1.3
TSR3-202ENST00000566296 SMG6Q86US8 1419 aaKnown RBP23.13■■□□□ 1.29
TSR3-202ENST00000566296 ZNF827Q17R98 1081 aa23.12■■□□□ 1.29
TSR3-202ENST00000566296 SLC27A3Q5K4L6 730 aa23.12■■□□□ 1.29
TSR3-202ENST00000566296 SHANK3Q9BYB0 1731 aa23.12■■□□□ 1.29
TSR3-202ENST00000566296 KIF20BQ96Q89 1820 aa23.12■■□□□ 1.29
TSR3-202ENST00000566296 QSER1Q2KHR3 1735 aa23.11■■□□□ 1.29
TSR3-202ENST00000566296 SYTL4Q96C24 671 aaPredicted RBP23.11■■□□□ 1.29
TSR3-202ENST00000566296 FHDC1Q9C0D6 1143 aaPredicted RBP23.11■■□□□ 1.29
TSR3-202ENST00000566296 MEGF6O75095 1541 aa23.11■■□□□ 1.29
TSR3-202ENST00000566296 LRRC4BQ9NT99 713 aa23.1■■□□□ 1.29
TSR3-202ENST00000566296 FBLN1P23142 703 aa23.09■■□□□ 1.29
TSR3-202ENST00000566296 RRS1Q15050 365 aaKnown RBP23.09■■□□□ 1.29
TSR3-202ENST00000566296 CDCA8Q53HL2 280 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms