RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 CDCA7LQ96GN5 454 aa16.18■□□□□ 0.18
CX3CL1-204ENST00000565912 TRAK2O60296 914 aa16.18■□□□□ 0.18
CX3CL1-204ENST00000565912 MBD3O95983 291 aa16.18■□□□□ 0.18
CX3CL1-204ENST00000565912 CALRP27797 417 aaKnown RBP16.18■□□□□ 0.18
CX3CL1-204ENST00000565912 PIP4K2AP48426 406 aaPredicted RBP16.18■□□□□ 0.18
CX3CL1-204ENST00000565912 TOM1L2Q6ZVM7 507 aa16.18■□□□□ 0.18
CX3CL1-204ENST00000565912 CCDC191Q8NCU4 936 aa16.18■□□□□ 0.18
CX3CL1-204ENST00000565912 NACAP1Q9BZK3 213 aa16.18■□□□□ 0.18
CX3CL1-204ENST00000565912 NOB1Q9ULX3 412 aaKnown RBP16.18■□□□□ 0.18
CX3CL1-204ENST00000565912 MCM2P49736 904 aa16.17■□□□□ 0.18
CX3CL1-204ENST00000565912 PRAM1Q96QH2 718 aa16.17■□□□□ 0.18
CX3CL1-204ENST00000565912 MAP4K4O95819 1239 aaPredicted RBP16.17■□□□□ 0.18
CX3CL1-204ENST00000565912 NEFHP12036 1026 aa16.17■□□□□ 0.18
CX3CL1-204ENST00000565912 NUP133Q8WUM0 1156 aa16.17■□□□□ 0.18
CX3CL1-204ENST00000565912 ZNHIT6Q9NWK9 470 aaKnown RBP16.17■□□□□ 0.18
CX3CL1-204ENST00000565912 TRIM22Q8IYM9 498 aa16.17■□□□□ 0.18
CX3CL1-204ENST00000565912 CCDC69A6NI79 296 aa16.16■□□□□ 0.18
CX3CL1-204ENST00000565912 MYL6BP14649 208 aa16.16■□□□□ 0.18
CX3CL1-204ENST00000565912 RABEP1Q15276 862 aa16.16■□□□□ 0.18
CX3CL1-204ENST00000565912 TSR2Q969E8 191 aaKnown RBP16.16■□□□□ 0.18
CX3CL1-204ENST00000565912 CYP46A1Q9Y6A2 500 aa16.16■□□□□ 0.18
CX3CL1-204ENST00000565912 SERPINC1P01008 464 aa16.16■□□□□ 0.18
CX3CL1-204ENST00000565912 JMYQ8N9B5 988 aa16.16■□□□□ 0.18
CX3CL1-204ENST00000565912 PPP2R1AP30153 589 aa16.16■□□□□ 0.18
CX3CL1-204ENST00000565912 SULT6B1Q6IMI4 303 aa16.16■□□□□ 0.18
CX3CL1-204ENST00000565912 TANGO6Q9C0B7 1094 aa16.16■□□□□ 0.18
CX3CL1-204ENST00000565912 EHBP1L1Q8N3D4 1523 aa16.16■□□□□ 0.18
CX3CL1-204ENST00000565912 SPC24Q8NBT2 197 aa16.15■□□□□ 0.18
CX3CL1-204ENST00000565912 MPHOSPH8Q99549 860 aa16.15■□□□□ 0.18
CX3CL1-204ENST00000565912 SOGA3Q5TF21 947 aa16.15■□□□□ 0.18
CX3CL1-204ENST00000565912 GCC1Q96CN9 775 aa16.15■□□□□ 0.18
CX3CL1-204ENST00000565912 CCP110O43303 1012 aa16.15■□□□□ 0.18
CX3CL1-204ENST00000565912 AXDND1Q5T1B0 1012 aaPredicted RBP16.15■□□□□ 0.18
CX3CL1-204ENST00000565912 ZNF530Q6P9A1 599 aaPredicted RBP16.14■□□□□ 0.17
CX3CL1-204ENST00000565912 LRRCC1Q9C099 1032 aa16.13■□□□□ 0.17
CX3CL1-204ENST00000565912 DEF6Q9H4E7 631 aa16.13■□□□□ 0.17
CX3CL1-204ENST00000565912 BICRAQ9NZM4 1560 aa16.13■□□□□ 0.17
CX3CL1-204ENST00000565912 ME1P48163 572 aa16.13■□□□□ 0.17
CX3CL1-204ENST00000565912 SRCIN1Q9C0H9 1055 aa16.13■□□□□ 0.17
CX3CL1-204ENST00000565912 BRD4O60885 1362 aaPredicted RBP16.13■□□□□ 0.17
CX3CL1-204ENST00000565912 FKBP4Q02790 459 aaKnown RBP eCLIP16.13■□□□□ 0.17
CX3CL1-204ENST00000565912 CCDC57Q2TAC2 916 aa16.13■□□□□ 0.17
CX3CL1-204ENST00000565912 C9orf84Q5VXU9 1444 aa16.13■□□□□ 0.17
CX3CL1-204ENST00000565912 STIM1Q13586 685 aa16.13■□□□□ 0.17
CX3CL1-204ENST00000565912 RRBP1Q9P2E9 1410 aaKnown RBP16.13■□□□□ 0.17
CX3CL1-204ENST00000565912 HECW1Q76N89 1606 aa16.13■□□□□ 0.17
CX3CL1-204ENST00000565912 ANKRD62A6NC57 917 aa16.12■□□□□ 0.17
CX3CL1-204ENST00000565912 PPFIBP1Q86W92 1011 aa16.12■□□□□ 0.17
CX3CL1-204ENST00000565912 TROQ12816 1431 aaPredicted RBP16.12■□□□□ 0.17
CX3CL1-204ENST00000565912 ERLIN2O94905 339 aa16.12■□□□□ 0.17
CX3CL1-204ENST00000565912 ZSCAN29Q8IWY8 852 aaPredicted RBP16.12■□□□□ 0.17
CX3CL1-204ENST00000565912 SCAPERQ9BY12 1400 aa16.12■□□□□ 0.17
CX3CL1-204ENST00000565912 CCT4P50991 539 aaKnown RBP16.12■□□□□ 0.17
CX3CL1-204ENST00000565912 TSPYL1Q9H0U9 437 aa16.12■□□□□ 0.17
CX3CL1-204ENST00000565912 DNAJC5BQ9UF47 199 aa16.12■□□□□ 0.17
CX3CL1-204ENST00000565912 SPG7Q9UQ90 795 aa16.12■□□□□ 0.17
CX3CL1-204ENST00000565912 SSBP05455 408 aaKnown RBP eCLIP16.11■□□□□ 0.17
CX3CL1-204ENST00000565912 ANKRD1Q15327 319 aa16.11■□□□□ 0.17
CX3CL1-204ENST00000565912 CWC15Q9P013 229 aaKnown RBP16.11■□□□□ 0.17
CX3CL1-204ENST00000565912 PNISRQ8TF01 805 aaKnown RBP16.11■□□□□ 0.17
CX3CL1-204ENST00000565912 CDK19Q9BWU1 502 aa16.11■□□□□ 0.17
CX3CL1-204ENST00000565912 ZSCAN25Q6NSZ9 544 aa16.1■□□□□ 0.17
CX3CL1-204ENST00000565912 TNMDQ9H2S6 317 aa16.1■□□□□ 0.17
CX3CL1-204ENST00000565912 CABP1Q9NZU7 370 aa16.1■□□□□ 0.17
CX3CL1-204ENST00000565912 DACH1Q9UI36 760 aa16.1■□□□□ 0.17
CX3CL1-204ENST00000565912 CCDC181Q5TID7 509 aa16.1■□□□□ 0.17
CX3CL1-204ENST00000565912 CT47B1P0C2W7 299 aaPredicted RBP16.09■□□□□ 0.17
CX3CL1-204ENST00000565912 AEBP1Q8IUX7 1158 aa16.09■□□□□ 0.17
CX3CL1-204ENST00000565912 LUC7LQ9NQ29 371 aaKnown RBP16.09■□□□□ 0.17
CX3CL1-204ENST00000565912 SEPT7Q16181 437 aaKnown RBP16.09■□□□□ 0.17
CX3CL1-204ENST00000565912 AACSQ86V21 672 aa16.09■□□□□ 0.17
CX3CL1-204ENST00000565912 NOL7Q9UMY1 257 aaKnown RBP16.09■□□□□ 0.17
CX3CL1-204ENST00000565912 BCAR3O75815 825 aa16.09■□□□□ 0.17
CX3CL1-204ENST00000565912 SLC12A5Q9H2X9 1139 aa16.09■□□□□ 0.17
CX3CL1-204ENST00000565912 SEPT11Q9NVA2 429 aaKnown RBP16.09■□□□□ 0.17
CX3CL1-204ENST00000565912 PLEKHH2Q8IVE3 1493 aa16.08■□□□□ 0.17
CX3CL1-204ENST00000565912 MPHOSPH10O00566 681 aaKnown RBP16.08■□□□□ 0.17
CX3CL1-204ENST00000565912 CCDC192P0DO97 292 aa16.08■□□□□ 0.17
CX3CL1-204ENST00000565912 TDO2P48775 406 aa16.08■□□□□ 0.17
CX3CL1-204ENST00000565912 ZRSR2Q15696 482 aaKnown RBP16.08■□□□□ 0.17
CX3CL1-204ENST00000565912 RAI14Q9P0K7 980 aa16.08■□□□□ 0.17
CX3CL1-204ENST00000565912 LARP1BQ659C4 914 aaKnown RBP16.08■□□□□ 0.16
CX3CL1-204ENST00000565912 BICDL1Q6ZP65 573 aa16.08■□□□□ 0.16
CX3CL1-204ENST00000565912 RAPGEF3O95398 923 aa16.08■□□□□ 0.16
CX3CL1-204ENST00000565912 SPINK5Q9NQ38 1064 aaPredicted RBP16.08■□□□□ 0.16
CX3CL1-204ENST00000565912 PIBF1Q8WXW3 757 aa16.07■□□□□ 0.16
CX3CL1-204ENST00000565912 LAMC3Q9Y6N6 1575 aa16.07■□□□□ 0.16
CX3CL1-204ENST00000565912 MPNDQ8N594 471 aa16.07■□□□□ 0.16
CX3CL1-204ENST00000565912 GOLGA6L10A6NI86 522 aa16.07■□□□□ 0.16
CX3CL1-204ENST00000565912 UBAC1Q9BSL1 405 aa16.07■□□□□ 0.16
CX3CL1-204ENST00000565912 FAM177A1Q8N128 213 aaPredicted RBP16.07■□□□□ 0.16
CX3CL1-204ENST00000565912 IBSPP21815 317 aaPredicted RBP16.06■□□□□ 0.16
CX3CL1-204ENST00000565912 ZNF76P36508 570 aa16.06■□□□□ 0.16
CX3CL1-204ENST00000565912 KRT85P78386 507 aa16.06■□□□□ 0.16
CX3CL1-204ENST00000565912 THEMISQ8N1K5 641 aaPredicted RBP16.06■□□□□ 0.16
CX3CL1-204ENST00000565912 ZNF692Q9BU19 519 aaPredicted RBP16.06■□□□□ 0.16
CX3CL1-204ENST00000565912 TIAM1Q13009 1591 aa16.06■□□□□ 0.16
CX3CL1-204ENST00000565912 MATR3P43243 847 aaKnown RBP eCLIP16.06■□□□□ 0.16
CX3CL1-204ENST00000565912 BMP2KQ9NSY1 1161 aaPredicted RBP16.06■□□□□ 0.16
CX3CL1-204ENST00000565912 ABCA10Q8WWZ4 1543 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms