RNA–Protein interactions for RNA: ENST00000565848.1

NR4A1-221, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 2

Gene NR4A1, Length 691 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-221ENST00000565848 ABTB2Q8N961 1025 aa16.92■□□□□ 0.3
NR4A1-221ENST00000565848 SMG6Q86US8 1419 aaKnown RBP16.92■□□□□ 0.3
NR4A1-221ENST00000565848 BAG6P46379 1132 aa16.91■□□□□ 0.3
NR4A1-221ENST00000565848 RALBP1Q15311 655 aa16.91■□□□□ 0.3
NR4A1-221ENST00000565848 CC2D1BQ5T0F9 858 aaKnown RBP16.91■□□□□ 0.3
NR4A1-221ENST00000565848 CABLES1Q8TDN4 633 aa16.91■□□□□ 0.3
NR4A1-221ENST00000565848 NPM3O75607 178 aaKnown RBP16.9■□□□□ 0.3
NR4A1-221ENST00000565848 PAK3O75914 559 aaPredicted RBP16.9■□□□□ 0.3
NR4A1-221ENST00000565848 MAP2P11137 1827 aaKnown RBP16.89■□□□□ 0.29
NR4A1-221ENST00000565848 VPS72Q15906 364 aa16.89■□□□□ 0.29
NR4A1-221ENST00000565848 NLRP13Q86W25 1043 aa16.89■□□□□ 0.29
NR4A1-221ENST00000565848 COG3Q96JB2 828 aa16.89■□□□□ 0.29
NR4A1-221ENST00000565848 NLRP6P59044 892 aa16.88■□□□□ 0.29
NR4A1-221ENST00000565848 EN1Q05925 392 aaPredicted RBP16.88■□□□□ 0.29
NR4A1-221ENST00000565848 R3HDM1Q15032 1099 aaKnown RBP16.88■□□□□ 0.29
NR4A1-221ENST00000565848 PEAK1Q9H792 1746 aa16.87■□□□□ 0.29
NR4A1-221ENST00000565848 LTN1O94822 1766 aa16.87■□□□□ 0.29
NR4A1-221ENST00000565848 ANP32CO43423 234 aa16.87■□□□□ 0.29
NR4A1-221ENST00000565848 COL18A1P39060 1754 aa16.87■□□□□ 0.29
NR4A1-221ENST00000565848 FAM182BQ5T319 152 aa16.86■□□□□ 0.29
NR4A1-221ENST00000565848 MORC1Q86VD1 984 aa16.86■□□□□ 0.29
NR4A1-221ENST00000565848 MYBBP1AQ9BQG0 1328 aaKnown RBP16.86■□□□□ 0.29
NR4A1-221ENST00000565848 ABCC6O95255 1503 aa16.86■□□□□ 0.29
NR4A1-221ENST00000565848 PPP2R1AP30153 589 aa16.85■□□□□ 0.29
NR4A1-221ENST00000565848 FAM98CQ17RN3 349 aaKnown RBP16.85■□□□□ 0.29
NR4A1-221ENST00000565848 NUTM2GQ5VZR2 741 aa16.85■□□□□ 0.29
NR4A1-221ENST00000565848 INSRP06213 1382 aa16.85■□□□□ 0.29
NR4A1-221ENST00000565848 ONECUT3O60422 494 aaPredicted RBP16.84■□□□□ 0.29
NR4A1-221ENST00000565848 GCP02774 474 aa16.84■□□□□ 0.29
NR4A1-221ENST00000565848 RNF216Q9NWF9 866 aaPredicted RBP16.84■□□□□ 0.29
NR4A1-221ENST00000565848 CPDO75976 1380 aa16.84■□□□□ 0.29
NR4A1-221ENST00000565848 KIF24Q5T7B8 1368 aa16.84■□□□□ 0.29
NR4A1-221ENST00000565848 COL3A1P02461 1466 aaPredicted RBP16.84■□□□□ 0.29
NR4A1-221ENST00000565848 SLIT2O94813 1529 aa16.84■□□□□ 0.29
NR4A1-221ENST00000565848 GLI3P10071 1580 aa16.84■□□□□ 0.29
NR4A1-221ENST00000565848 KCNH5Q8NCM2 988 aa16.83■□□□□ 0.28
NR4A1-221ENST00000565848 LMO7Q8WWI1 1683 aa16.83■□□□□ 0.28
NR4A1-221ENST00000565848 POLKQ9UBT6 870 aa16.83■□□□□ 0.28
NR4A1-221ENST00000565848 FAM83GA6ND36 823 aa16.82■□□□□ 0.28
NR4A1-221ENST00000565848 FBLN1P23142 703 aa16.82■□□□□ 0.28
NR4A1-221ENST00000565848 MIER1Q8N108 512 aa16.82■□□□□ 0.28
NR4A1-221ENST00000565848 YY1P25490 414 aa16.81■□□□□ 0.28
NR4A1-221ENST00000565848 ARHGEF25Q86VW2 580 aa16.81■□□□□ 0.28
NR4A1-221ENST00000565848 RTL1A6NKG5 1358 aa16.8■□□□□ 0.28
NR4A1-221ENST00000565848 MAP3K19Q56UN5 1328 aa16.8■□□□□ 0.28
NR4A1-221ENST00000565848 CCER2I3L3R5 266 aa16.79■□□□□ 0.28
NR4A1-221ENST00000565848 HOXD11P31277 338 aaPredicted RBP16.78■□□□□ 0.28
NR4A1-221ENST00000565848 MTHFSP49914 203 aa16.78■□□□□ 0.28
NR4A1-221ENST00000565848 EZH2Q15910 746 aaKnown RBP16.78■□□□□ 0.28
NR4A1-221ENST00000565848 BTG4Q9NY30 223 aa16.78■□□□□ 0.28
NR4A1-221ENST00000565848 EMILIN1Q9Y6C2 1016 aa16.78■□□□□ 0.28
NR4A1-221ENST00000565848 RGPD5Q99666 1765 aa16.77■□□□□ 0.28
NR4A1-221ENST00000565848 RGPD1P0DJD0 1748 aa16.77■□□□□ 0.28
NR4A1-221ENST00000565848 TNNT2P45379 298 aaPredicted RBP16.77■□□□□ 0.28
NR4A1-221ENST00000565848 CNGB1Q14028 1251 aaPredicted RBP16.77■□□□□ 0.28
NR4A1-221ENST00000565848 RRS1Q15050 365 aaKnown RBP16.77■□□□□ 0.28
NR4A1-221ENST00000565848 CCDC184Q52MB2 194 aa16.77■□□□□ 0.28
NR4A1-221ENST00000565848 COL14A1Q05707 1796 aaKnown RBP16.77■□□□□ 0.27
NR4A1-221ENST00000565848 FLT4P35916 1363 aa16.77■□□□□ 0.27
NR4A1-221ENST00000565848 CAMTA1Q9Y6Y1 1673 aa16.76■□□□□ 0.27
NR4A1-221ENST00000565848 LRP5O75197 1615 aa16.76■□□□□ 0.27
NR4A1-221ENST00000565848 KIAA0232Q92628 1395 aa16.76■□□□□ 0.27
NR4A1-221ENST00000565848 IP6K1Q92551 441 aa16.74■□□□□ 0.27
NR4A1-221ENST00000565848 PLCH1Q4KWH8 1693 aa16.74■□□□□ 0.27
NR4A1-221ENST00000565848 NRAPQ86VF7 1730 aa16.73■□□□□ 0.27
NR4A1-221ENST00000565848 NWD2Q9ULI1 1742 aa16.73■□□□□ 0.27
NR4A1-221ENST00000565848 TRIM37O94972 964 aa16.73■□□□□ 0.27
NR4A1-221ENST00000565848 HOXC9P31274 260 aa16.73■□□□□ 0.27
NR4A1-221ENST00000565848 POTEDQ86YR6 584 aa16.73■□□□□ 0.27
NR4A1-221ENST00000565848 BRWD3Q6RI45 1802 aa16.73■□□□□ 0.27
NR4A1-221ENST00000565848 FAM208AQ9UK61 1670 aaKnown RBP16.72■□□□□ 0.27
NR4A1-221ENST00000565848 SOX12O15370 315 aa16.72■□□□□ 0.27
NR4A1-221ENST00000565848 NCAPD2Q15021 1401 aa16.71■□□□□ 0.27
NR4A1-221ENST00000565848 DCAF8L1A6NGE4 600 aa16.71■□□□□ 0.27
NR4A1-221ENST00000565848 APBA3O96018 575 aa16.71■□□□□ 0.27
NR4A1-221ENST00000565848 ZC3H6P61129 1189 aaKnown RBP16.71■□□□□ 0.27
NR4A1-221ENST00000565848 AXIN2Q9Y2T1 843 aa16.71■□□□□ 0.27
NR4A1-221ENST00000565848 HSP90AB2PQ58FF8 381 aa16.7■□□□□ 0.26
NR4A1-221ENST00000565848 PPP1R1BQ9UD71 204 aaPredicted RBP16.7■□□□□ 0.26
NR4A1-221ENST00000565848 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.7■□□□□ 0.26
NR4A1-221ENST00000565848 COL5A2P05997 1499 aaPredicted RBP16.69■□□□□ 0.26
NR4A1-221ENST00000565848 IL13P35225 146 aa16.69■□□□□ 0.26
NR4A1-221ENST00000565848 RGPD2P0DJD1 1756 aa16.69■□□□□ 0.26
NR4A1-221ENST00000565848 AMPHP49418 695 aa16.68■□□□□ 0.26
NR4A1-221ENST00000565848 PNISRQ8TF01 805 aaKnown RBP16.68■□□□□ 0.26
NR4A1-221ENST00000565848 CAMKK2Q96RR4 588 aa16.68■□□□□ 0.26
NR4A1-221ENST00000565848 ERBB3P21860 1342 aa16.68■□□□□ 0.26
NR4A1-221ENST00000565848 EIF4A2Q14240 407 aaKnown RBP16.67■□□□□ 0.26
NR4A1-221ENST00000565848 PRDM11Q9NQV5 511 aa16.67■□□□□ 0.26
NR4A1-221ENST00000565848 SPATA31A5Q5VU36 1347 aa16.67■□□□□ 0.26
NR4A1-221ENST00000565848 SPATA31A7Q8IWB4 1347 aa16.67■□□□□ 0.26
NR4A1-221ENST00000565848 CHRNA2Q15822 529 aa16.66■□□□□ 0.26
NR4A1-221ENST00000565848 NBPF14Q5TI25 921 aa16.66■□□□□ 0.26
NR4A1-221ENST00000565848 FAM196AQ6ZSG2 479 aa16.66■□□□□ 0.26
NR4A1-221ENST00000565848 CFAP53Q96M91 514 aa16.66■□□□□ 0.26
NR4A1-221ENST00000565848 MRS2Q9HD23 443 aa16.66■□□□□ 0.26
NR4A1-221ENST00000565848 STRN4Q9NRL3 753 aa16.66■□□□□ 0.26
NR4A1-221ENST00000565848 USP35Q9P2H5 1018 aa16.66■□□□□ 0.26
NR4A1-221ENST00000565848 PPM1GO15355 546 aaPredicted RBP16.65■□□□□ 0.26
NR4A1-221ENST00000565848 DIAPH1O60610 1272 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms