RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 USP17L4A6NCW7 530 aa7.45□□□□□ -1.22
LINC00561-201ENST00000565815 NBPF14Q5TI25 921 aa7.45□□□□□ -1.22
LINC00561-201ENST00000565815 USP17L2Q6R6M4 530 aa7.45□□□□□ -1.22
LINC00561-201ENST00000565815 LIAT1Q6ZQX7 453 aa7.45□□□□□ -1.22
LINC00561-201ENST00000565815 USP17L1Q7RTZ2 530 aa7.45□□□□□ -1.22
LINC00561-201ENST00000565815 USP17L5A8MUK1 530 aa7.45□□□□□ -1.22
LINC00561-201ENST00000565815 GAS2L2Q8NHY3 880 aa7.45□□□□□ -1.22
LINC00561-201ENST00000565815 ATP9BO43861 1147 aa7.44□□□□□ -1.22
LINC00561-201ENST00000565815 KIAA1024Q9UPX6 916 aa7.44□□□□□ -1.22
LINC00561-201ENST00000565815 PTK2Q05397 1052 aa7.44□□□□□ -1.22
LINC00561-201ENST00000565815 KANK4Q5T7N3 995 aaPredicted RBP7.44□□□□□ -1.22
LINC00561-201ENST00000565815 ZMIZ1Q9ULJ6 1067 aa7.44□□□□□ -1.22
LINC00561-201ENST00000565815 LAMC3Q9Y6N6 1575 aa7.44□□□□□ -1.22
LINC00561-201ENST00000565815 PBXIP1Q96AQ6 731 aa7.43□□□□□ -1.22
LINC00561-201ENST00000565815 SCTRP47872 440 aa7.43□□□□□ -1.22
LINC00561-201ENST00000565815 PHTF2Q8N3S3 785 aa7.43□□□□□ -1.22
LINC00561-201ENST00000565815 THOC2Q8NI27 1593 aaKnown RBP7.42□□□□□ -1.22
LINC00561-201ENST00000565815 ATAD2BQ9ULI0 1458 aa7.42□□□□□ -1.22
LINC00561-201ENST00000565815 CLDN10P78369 228 aa7.42□□□□□ -1.22
LINC00561-201ENST00000565815 RNF135Q8IUD6 432 aa7.42□□□□□ -1.22
LINC00561-201ENST00000565815 PLPP7Q8NBV4 271 aa7.42□□□□□ -1.22
LINC00561-201ENST00000565815 ZNF594Q96JF6 807 aaPredicted RBP7.42□□□□□ -1.22
LINC00561-201ENST00000565815 ARID5BQ14865 1188 aa7.42□□□□□ -1.22
LINC00561-201ENST00000565815 SLAIN2Q9P270 581 aa7.42□□□□□ -1.22
LINC00561-201ENST00000565815 PDS5BQ9NTI5 1447 aa7.41□□□□□ -1.22
LINC00561-201ENST00000565815 OXLD1Q5BKU9 147 aa7.41□□□□□ -1.22
LINC00561-201ENST00000565815 TRAF7Q6Q0C0 670 aa7.41□□□□□ -1.22
LINC00561-201ENST00000565815 DZIP3Q86Y13 1208 aaKnown RBP7.41□□□□□ -1.22
LINC00561-201ENST00000565815 AEBP1Q8IUX7 1158 aa7.41□□□□□ -1.22
LINC00561-201ENST00000565815 SLFNL1Q499Z3 407 aa7.4□□□□□ -1.22
LINC00561-201ENST00000565815 BPHLQ86WA6 291 aaPredicted RBP7.4□□□□□ -1.22
LINC00561-201ENST00000565815 ANKLE1Q8NAG6 615 aa7.4□□□□□ -1.22
LINC00561-201ENST00000565815 PNMA1Q8ND90 353 aa7.4□□□□□ -1.22
LINC00561-201ENST00000565815 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.4□□□□□ -1.23
LINC00561-201ENST00000565815 ZC3H4Q9UPT8 1303 aaKnown RBP7.4□□□□□ -1.23
LINC00561-201ENST00000565815 PDIA4P13667 645 aaKnown RBP7.39□□□□□ -1.23
LINC00561-201ENST00000565815 TMPRSS4Q9NRS4 437 aa7.39□□□□□ -1.23
LINC00561-201ENST00000565815 MKRN1Q9UHC7 482 aaKnown RBP7.39□□□□□ -1.23
LINC00561-201ENST00000565815 TMEM88BA6NKF7 163 aa7.39□□□□□ -1.23
LINC00561-201ENST00000565815 TMEM164Q5U3C3 297 aa7.39□□□□□ -1.23
LINC00561-201ENST00000565815 ARMC2Q8NEN0 867 aa7.39□□□□□ -1.23
LINC00561-201ENST00000565815 SLC10A4Q96EP9 437 aa7.39□□□□□ -1.23
LINC00561-201ENST00000565815 PODXL2Q9NZ53 605 aa7.39□□□□□ -1.23
LINC00561-201ENST00000565815 ZBTB24O43167 697 aaPredicted RBP7.38□□□□□ -1.23
LINC00561-201ENST00000565815 FSHRP23945 695 aa7.38□□□□□ -1.23
LINC00561-201ENST00000565815 SOX11P35716 441 aa7.38□□□□□ -1.23
LINC00561-201ENST00000565815 GPSM3Q9Y4H4 160 aa7.38□□□□□ -1.23
LINC00561-201ENST00000565815 C1QTNF2Q9BXJ5 285 aa7.37□□□□□ -1.23
LINC00561-201ENST00000565815 NR3C2P08235 984 aa7.37□□□□□ -1.23
LINC00561-201ENST00000565815 EHBP1Q8NDI1 1231 aa7.37□□□□□ -1.23
LINC00561-201ENST00000565815 INTS6LQ5JSJ4 861 aaKnown RBP7.36□□□□□ -1.23
LINC00561-201ENST00000565815 RC3H1Q5TC82 1133 aaKnown RBP7.36□□□□□ -1.23
LINC00561-201ENST00000565815 GPKOWQ92917 476 aaPredicted RBP eCLIP7.36□□□□□ -1.23
LINC00561-201ENST00000565815 MRGPRX2Q96LB1 330 aa7.36□□□□□ -1.23
LINC00561-201ENST00000565815 KCTD15Q96SI1 283 aaPredicted RBP7.36□□□□□ -1.23
LINC00561-201ENST00000565815 PCDHB11Q9Y5F2 797 aa7.36□□□□□ -1.23
LINC00561-201ENST00000565815 PEG3Q9GZU2 1588 aa7.35□□□□□ -1.23
LINC00561-201ENST00000565815 RASA1P20936 1047 aa7.35□□□□□ -1.23
LINC00561-201ENST00000565815 GRM5P41594 1212 aa7.35□□□□□ -1.23
LINC00561-201ENST00000565815 DOLKQ9UPQ8 538 aa7.35□□□□□ -1.23
LINC00561-201ENST00000565815 USP17L15C9J2P7 530 aa7.35□□□□□ -1.23
LINC00561-201ENST00000565815 USP17L10C9JJH3 530 aa7.35□□□□□ -1.23
LINC00561-201ENST00000565815 USP17L13C9JLJ4 530 aa7.35□□□□□ -1.23
LINC00561-201ENST00000565815 USP17L12C9JPN9 530 aa7.35□□□□□ -1.23
LINC00561-201ENST00000565815 USP17L11C9JVI0 530 aa7.35□□□□□ -1.23
LINC00561-201ENST00000565815 USP17L21D6R901 530 aa7.35□□□□□ -1.23
LINC00561-201ENST00000565815 USP17L18D6R9N7 530 aa7.35□□□□□ -1.23
LINC00561-201ENST00000565815 USP17L22D6RA61 530 aa7.35□□□□□ -1.23
LINC00561-201ENST00000565815 USP17L17D6RBQ6 530 aa7.35□□□□□ -1.23
LINC00561-201ENST00000565815 USP17L19D6RCP7 530 aa7.35□□□□□ -1.23
LINC00561-201ENST00000565815 USP17L20D6RJB6 530 aa7.35□□□□□ -1.23
LINC00561-201ENST00000565815 ERVH48-1M5A8F1 160 aa7.35□□□□□ -1.23
LINC00561-201ENST00000565815 USP17L24Q0WX57 530 aa7.35□□□□□ -1.23
LINC00561-201ENST00000565815 PTK7Q13308 1070 aa7.35□□□□□ -1.23
LINC00561-201ENST00000565815 VASH1Q7L8A9 365 aaPredicted RBP7.35□□□□□ -1.23
LINC00561-201ENST00000565815 OGFOD1Q8N543 542 aa7.35□□□□□ -1.23
LINC00561-201ENST00000565815 VRTNQ9H8Y1 702 aa7.35□□□□□ -1.23
LINC00561-201ENST00000565815 NOVA2Q9UNW9 492 aaKnown RBP7.35□□□□□ -1.23
LINC00561-201ENST00000565815 BAZ1BQ9UIG0 1483 aaKnown RBP7.34□□□□□ -1.23
LINC00561-201ENST00000565815 SMARCA4P51532 1647 aa7.34□□□□□ -1.23
LINC00561-201ENST00000565815 TNFRSF10AO00220 468 aa7.34□□□□□ -1.23
LINC00561-201ENST00000565815 FOXC1Q12948 553 aa7.34□□□□□ -1.23
LINC00561-201ENST00000565815 CHIC2Q9UKJ5 165 aa7.34□□□□□ -1.23
LINC00561-201ENST00000565815 CYLDQ9NQC7 956 aa7.33□□□□□ -1.24
LINC00561-201ENST00000565815 PLA2G2EQ9NZK7 142 aa7.33□□□□□ -1.24
LINC00561-201ENST00000565815 DKK1O94907 266 aa7.33□□□□□ -1.24
LINC00561-201ENST00000565815 BAZ1AQ9NRL2 1556 aaPredicted RBP7.33□□□□□ -1.24
LINC00561-201ENST00000565815 MRC2Q9UBG0 1479 aa7.32□□□□□ -1.24
LINC00561-201ENST00000565815 SFI1A8K8P3 1242 aa7.32□□□□□ -1.24
LINC00561-201ENST00000565815 SIAH2O43255 324 aa7.32□□□□□ -1.24
LINC00561-201ENST00000565815 FAM69CQ0P6D2 419 aa7.32□□□□□ -1.24
LINC00561-201ENST00000565815 ESPNB1AK53 854 aa7.32□□□□□ -1.24
LINC00561-201ENST00000565815 SLC19A1P41440 591 aa7.32□□□□□ -1.24
LINC00561-201ENST00000565815 DPYDQ12882 1025 aa7.32□□□□□ -1.24
LINC00561-201ENST00000565815 PHLDB3Q6NSJ2 640 aa7.32□□□□□ -1.24
LINC00561-201ENST00000565815 CAPN12Q6ZSI9 719 aa7.32□□□□□ -1.24
LINC00561-201ENST00000565815 ZNF784Q8NCA9 323 aaPredicted RBP7.32□□□□□ -1.24
LINC00561-201ENST00000565815 NESP48681 1621 aa7.32□□□□□ -1.24
LINC00561-201ENST00000565815 PPP1R15AO75807 674 aaPredicted RBP7.31□□□□□ -1.24
LINC00561-201ENST00000565815 ATG7O95352 703 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms