RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 INSRP06213 1382 aa10.4□□□□□ -0.74
CDH1-208ENST00000565810 U2SURPO15042 1029 aaKnown RBP10.4□□□□□ -0.74
CDH1-208ENST00000565810 ANKRD24Q8TF21 1146 aa10.4□□□□□ -0.74
CDH1-208ENST00000565810 C8orf37Q96NL8 207 aa10.4□□□□□ -0.74
CDH1-208ENST00000565810 BTG4Q9NY30 223 aa10.4□□□□□ -0.74
CDH1-208ENST00000565810 SMG6Q86US8 1419 aaKnown RBP10.4□□□□□ -0.75
CDH1-208ENST00000565810 NFAT5O94916 1531 aa10.39□□□□□ -0.75
CDH1-208ENST00000565810 EIF4A2Q14240 407 aaKnown RBP10.39□□□□□ -0.75
CDH1-208ENST00000565810 AXIN2Q9Y2T1 843 aa10.39□□□□□ -0.75
CDH1-208ENST00000565810 BLMP54132 1417 aaPredicted RBP10.39□□□□□ -0.75
CDH1-208ENST00000565810 USP54Q70EL1 1684 aa10.38□□□□□ -0.75
CDH1-208ENST00000565810 CDK12Q9NYV4 1490 aaPredicted RBP10.38□□□□□ -0.75
CDH1-208ENST00000565810 U2AF1L5P0DN76 240 aaPredicted RBP10.38□□□□□ -0.75
CDH1-208ENST00000565810 IL13P35225 146 aa10.38□□□□□ -0.75
CDH1-208ENST00000565810 U2AF1Q01081 240 aaKnown RBP eCLIP10.38□□□□□ -0.75
CDH1-208ENST00000565810 CCDC184Q52MB2 194 aa10.38□□□□□ -0.75
CDH1-208ENST00000565810 PNNQ9H307 717 aaKnown RBP10.38□□□□□ -0.75
CDH1-208ENST00000565810 STRN4Q9NRL3 753 aa10.38□□□□□ -0.75
CDH1-208ENST00000565810 COL22A1Q8NFW1 1626 aaPredicted RBP10.37□□□□□ -0.75
CDH1-208ENST00000565810 TOM1L2Q6ZVM7 507 aa10.37□□□□□ -0.75
CDH1-208ENST00000565810 FAM9BQ8IZU0 186 aa10.37□□□□□ -0.75
CDH1-208ENST00000565810 PNISRQ8TF01 805 aaKnown RBP10.37□□□□□ -0.75
CDH1-208ENST00000565810 NLRP2Q9NX02 1062 aa10.37□□□□□ -0.75
CDH1-208ENST00000565810 ANKRD26Q9UPS8 1709 aa10.37□□□□□ -0.75
CDH1-208ENST00000565810 ERBB3P21860 1342 aa10.36□□□□□ -0.75
CDH1-208ENST00000565810 NEFMP07197 916 aa10.36□□□□□ -0.75
CDH1-208ENST00000565810 ILDR1Q86SU0 546 aaPredicted RBP10.36□□□□□ -0.75
CDH1-208ENST00000565810 UNC5CLQ8IV45 518 aa10.36□□□□□ -0.75
CDH1-208ENST00000565810 FNBP4Q8N3X1 1017 aaPredicted RBP10.36□□□□□ -0.75
CDH1-208ENST00000565810 USP21Q9UK80 565 aa10.36□□□□□ -0.75
CDH1-208ENST00000565810 SHPRHQ149N8 1683 aa10.36□□□□□ -0.75
CDH1-208ENST00000565810 WDR17Q8IZU2 1322 aa10.35□□□□□ -0.75
CDH1-208ENST00000565810 EYA1Q99502 592 aa10.35□□□□□ -0.75
CDH1-208ENST00000565810 CCDC9Q9Y3X0 531 aaKnown RBP10.35□□□□□ -0.75
CDH1-208ENST00000565810 ABCC6O95255 1503 aa10.34□□□□□ -0.75
CDH1-208ENST00000565810 PHRF1Q9P1Y6 1649 aaKnown RBP10.34□□□□□ -0.75
CDH1-208ENST00000565810 FCHSD2O94868 740 aa10.34□□□□□ -0.75
CDH1-208ENST00000565810 NBPF6Q5VWK0 638 aa10.34□□□□□ -0.75
CDH1-208ENST00000565810 SULT6B1Q6IMI4 303 aa10.34□□□□□ -0.75
CDH1-208ENST00000565810 LARP1Q6PKG0 1096 aaKnown RBP10.34□□□□□ -0.75
CDH1-208ENST00000565810 NBPF4Q96M43 638 aa10.34□□□□□ -0.75
CDH1-208ENST00000565810 CARD10Q9BWT7 1032 aa10.34□□□□□ -0.75
CDH1-208ENST00000565810 ADAMTS8Q9UP79 889 aa10.34□□□□□ -0.75
CDH1-208ENST00000565810 AFF2P51816 1311 aa10.33□□□□□ -0.76
CDH1-208ENST00000565810 HMOX1P09601 288 aa10.33□□□□□ -0.76
CDH1-208ENST00000565810 MARF1Q9Y4F3 1742 aaKnown RBP10.33□□□□□ -0.76
CDH1-208ENST00000565810 LRP6O75581 1613 aa10.33□□□□□ -0.76
CDH1-208ENST00000565810 IGSF1Q8N6C5 1336 aa10.33□□□□□ -0.76
CDH1-208ENST00000565810 COL3A1P02461 1466 aaPredicted RBP10.32□□□□□ -0.76
CDH1-208ENST00000565810 COL5A2P05997 1499 aaPredicted RBP10.32□□□□□ -0.76
CDH1-208ENST00000565810 VPS72Q15906 364 aa10.32□□□□□ -0.76
CDH1-208ENST00000565810 ZNF772Q68DY9 489 aaPredicted RBP10.32□□□□□ -0.76
CDH1-208ENST00000565810 USHBP1Q8N6Y0 703 aa10.32□□□□□ -0.76
CDH1-208ENST00000565810 RAPGEF4Q8WZA2 1011 aa10.32□□□□□ -0.76
CDH1-208ENST00000565810 USP35Q9P2H5 1018 aa10.32□□□□□ -0.76
CDH1-208ENST00000565810 TRPC5Q9UL62 973 aaPredicted RBP10.32□□□□□ -0.76
CDH1-208ENST00000565810 SLIT2O94813 1529 aa10.32□□□□□ -0.76
CDH1-208ENST00000565810 MAPK8IP3Q9UPT6 1336 aa10.32□□□□□ -0.76
CDH1-208ENST00000565810 CAMTA1Q9Y6Y1 1673 aa10.31□□□□□ -0.76
CDH1-208ENST00000565810 TATP17735 454 aaPredicted RBP10.31□□□□□ -0.76
CDH1-208ENST00000565810 PRKAR2BP31323 418 aa10.31□□□□□ -0.76
CDH1-208ENST00000565810 TCP11L2Q8N4U5 519 aa10.31□□□□□ -0.76
CDH1-208ENST00000565810 RSPH6AQ9H0K4 717 aa10.31□□□□□ -0.76
CDH1-208ENST00000565810 THRAP3Q9Y2W1 955 aaKnown RBP10.31□□□□□ -0.76
CDH1-208ENST00000565810 MAP2P11137 1827 aaKnown RBP10.3□□□□□ -0.76
CDH1-208ENST00000565810 CRYBG1Q9Y4K1 1723 aa10.3□□□□□ -0.76
CDH1-208ENST00000565810 COL14A1Q05707 1796 aaKnown RBP10.3□□□□□ -0.76
CDH1-208ENST00000565810 AEBP1Q8IUX7 1158 aa10.3□□□□□ -0.76
CDH1-208ENST00000565810 CCDC146Q8IYE0 955 aa10.3□□□□□ -0.76
CDH1-208ENST00000565810 RUNDC1Q96C34 613 aa10.3□□□□□ -0.76
CDH1-208ENST00000565810 CDCA7Q9BWT1 371 aaPredicted RBP10.3□□□□□ -0.76
CDH1-208ENST00000565810 QTRT2Q9H974 415 aaKnown RBP10.3□□□□□ -0.76
CDH1-208ENST00000565810 CRB1P82279 1406 aa10.3□□□□□ -0.76
CDH1-208ENST00000565810 SPATA31A1Q5TZJ5 1347 aa10.3□□□□□ -0.76
CDH1-208ENST00000565810 PEAK1Q9H792 1746 aa10.3□□□□□ -0.76
CDH1-208ENST00000565810 IL2RBP14784 551 aa10.29□□□□□ -0.76
CDH1-208ENST00000565810 AMOTQ4VCS5 1084 aa10.29□□□□□ -0.76
CDH1-208ENST00000565810 PLEKHO1Q53GL0 409 aaPredicted RBP10.29□□□□□ -0.76
CDH1-208ENST00000565810 SPATA31A5Q5VU36 1347 aa10.29□□□□□ -0.76
CDH1-208ENST00000565810 SPATA31A7Q8IWB4 1347 aa10.29□□□□□ -0.76
CDH1-208ENST00000565810 BCL9LQ86UU0 1499 aa10.29□□□□□ -0.76
CDH1-208ENST00000565810 KDRP35968 1356 aa10.28□□□□□ -0.76
CDH1-208ENST00000565810 ABCA3Q99758 1704 aa10.28□□□□□ -0.76
CDH1-208ENST00000565810 GAS2L2Q8NHY3 880 aa10.28□□□□□ -0.76
CDH1-208ENST00000565810 GJD4Q96KN9 370 aaPredicted RBP10.28□□□□□ -0.76
CDH1-208ENST00000565810 SPG7Q9UQ90 795 aa10.28□□□□□ -0.76
CDH1-208ENST00000565810 LTN1O94822 1766 aa10.28□□□□□ -0.76
CDH1-208ENST00000565810 A0A0G2JS52 829 aa10.27□□□□□ -0.77
CDH1-208ENST00000565810 MYT1Q01538 1121 aa10.27□□□□□ -0.77
CDH1-208ENST00000565810 BARGINQ6ZT62 677 aa10.27□□□□□ -0.77
CDH1-208ENST00000565810 PLEKHF1Q96S99 279 aa10.27□□□□□ -0.77
CDH1-208ENST00000565810 LMO7Q8WWI1 1683 aa10.27□□□□□ -0.77
CDH1-208ENST00000565810 COL18A1P39060 1754 aa10.26□□□□□ -0.77
CDH1-208ENST00000565810 EXOC5O00471 708 aa10.26□□□□□ -0.77
CDH1-208ENST00000565810 APAF1O14727 1248 aa10.26□□□□□ -0.77
CDH1-208ENST00000565810 FAM98CQ17RN3 349 aaKnown RBP10.26□□□□□ -0.77
CDH1-208ENST00000565810 ZCRB1Q8TBF4 217 aaKnown RBP10.26□□□□□ -0.77
CDH1-208ENST00000565810 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.26□□□□□ -0.77
CDH1-208ENST00000565810 RBM6P78332 1123 aaKnown RBP10.25□□□□□ -0.77
CDH1-208ENST00000565810 LMOD3Q0VAK6 560 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms