RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 C11orf95C9JLR9 678 aaPredicted RBP12.24□□□□□ -0.45
CAPN3-213ENST00000565173 NFAT5O94916 1531 aa12.24□□□□□ -0.45
CAPN3-213ENST00000565173 DDB1Q16531 1140 aa12.24□□□□□ -0.45
CAPN3-213ENST00000565173 CARD11Q9BXL7 1154 aa12.24□□□□□ -0.45
CAPN3-213ENST00000565173 NUP188Q5SRE5 1749 aa12.23□□□□□ -0.45
CAPN3-213ENST00000565173 LRRC37A3O60309 1634 aa12.23□□□□□ -0.45
CAPN3-213ENST00000565173 USP31Q70CQ4 1352 aa12.23□□□□□ -0.45
CAPN3-213ENST00000565173 SOX12O15370 315 aa12.23□□□□□ -0.45
CAPN3-213ENST00000565173 PTF1AQ7RTS3 328 aa12.23□□□□□ -0.45
CAPN3-213ENST00000565173 MARCH10Q8NA82 808 aaPredicted RBP12.23□□□□□ -0.45
CAPN3-213ENST00000565173 CARD10Q9BWT7 1032 aa12.23□□□□□ -0.45
CAPN3-213ENST00000565173 RGPD5Q99666 1765 aa12.23□□□□□ -0.45
CAPN3-213ENST00000565173 OVOS2A0A0G2JMS6 1433 aa12.22□□□□□ -0.45
CAPN3-213ENST00000565173 OVOS2A0A0J9YW53 1432 aa12.22□□□□□ -0.45
CAPN3-213ENST00000565173 OVOS2Q6IE36 1432 aa12.22□□□□□ -0.45
CAPN3-213ENST00000565173 PLSCR1O15162 318 aa12.22□□□□□ -0.45
CAPN3-213ENST00000565173 CDCA7Q9BWT1 371 aaPredicted RBP12.22□□□□□ -0.45
CAPN3-213ENST00000565173 SLC12A5Q9H2X9 1139 aa12.22□□□□□ -0.45
CAPN3-213ENST00000565173 MON2Q7Z3U7 1717 aa12.22□□□□□ -0.45
CAPN3-213ENST00000565173 BCL9O00512 1426 aa12.21□□□□□ -0.45
CAPN3-213ENST00000565173 SBF2Q86WG5 1849 aa12.21□□□□□ -0.45
CAPN3-213ENST00000565173 NME9Q86XW9 330 aa12.21□□□□□ -0.45
CAPN3-213ENST00000565173 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.21□□□□□ -0.45
CAPN3-213ENST00000565173 BCL11BQ9C0K0 894 aaPredicted RBP12.21□□□□□ -0.45
CAPN3-213ENST00000565173 NBPF14Q5TI25 921 aa12.2□□□□□ -0.46
CAPN3-213ENST00000565173 PROM2Q8N271 834 aa12.2□□□□□ -0.46
CAPN3-213ENST00000565173 PUS7Q96PZ0 661 aaKnown RBP12.2□□□□□ -0.46
CAPN3-213ENST00000565173 WNK3Q9BYP7 1800 aa12.2□□□□□ -0.46
CAPN3-213ENST00000565173 USP54Q70EL1 1684 aa12.19□□□□□ -0.46
CAPN3-213ENST00000565173 CSB-PGBD3P0DP91 1061 aa12.19□□□□□ -0.46
CAPN3-213ENST00000565173 TMC1Q8TDI8 760 aa12.19□□□□□ -0.46
CAPN3-213ENST00000565173 TESK2Q96S53 571 aa12.19□□□□□ -0.46
CAPN3-213ENST00000565173 ABCC6O95255 1503 aa12.19□□□□□ -0.46
CAPN3-213ENST00000565173 TONSLQ96HA7 1378 aa12.18□□□□□ -0.46
CAPN3-213ENST00000565173 EXOC5O00471 708 aa12.18□□□□□ -0.46
CAPN3-213ENST00000565173 CCDC7Q96M83 1385 aa12.18□□□□□ -0.46
CAPN3-213ENST00000565173 ERBB3P21860 1342 aa12.17□□□□□ -0.46
CAPN3-213ENST00000565173 HDGFL2Q7Z4V5 671 aaPredicted RBP12.17□□□□□ -0.46
CAPN3-213ENST00000565173 EDC4Q6P2E9 1401 aaKnown RBP12.17□□□□□ -0.46
CAPN3-213ENST00000565173 RGPD3A6NKT7 1758 aaPredicted RBP12.17□□□□□ -0.46
CAPN3-213ENST00000565173 RGPD4Q7Z3J3 1758 aa12.17□□□□□ -0.46
CAPN3-213ENST00000565173 A0A1W2PP64 1363 aa12.17□□□□□ -0.46
CAPN3-213ENST00000565173 ST20-MTHFSA0A0A6YYL1 179 aa12.16□□□□□ -0.46
CAPN3-213ENST00000565173 ANO8Q9HCE9 1232 aaPredicted RBP12.16□□□□□ -0.46
CAPN3-213ENST00000565173 KCNQ2O43526 872 aa12.15□□□□□ -0.46
CAPN3-213ENST00000565173 TERF2IPQ9NYB0 399 aa12.15□□□□□ -0.46
CAPN3-213ENST00000565173 TNS2Q63HR2 1409 aa12.14□□□□□ -0.47
CAPN3-213ENST00000565173 ANKRD24Q8TF21 1146 aa12.14□□□□□ -0.47
CAPN3-213ENST00000565173 PDGFDQ9GZP0 370 aaPredicted RBP12.14□□□□□ -0.47
CAPN3-213ENST00000565173 SPON1Q9HCB6 807 aa12.14□□□□□ -0.47
CAPN3-213ENST00000565173 NLRP2Q9NX02 1062 aa12.14□□□□□ -0.47
CAPN3-213ENST00000565173 UTRNP46939 3433 aa12.14□□□□□ -0.47
CAPN3-213ENST00000565173 LTN1O94822 1766 aa12.13□□□□□ -0.47
CAPN3-213ENST00000565173 TXNRD1Q16881 649 aa12.13□□□□□ -0.47
CAPN3-213ENST00000565173 IP6K1Q92551 441 aa12.13□□□□□ -0.47
CAPN3-213ENST00000565173 IL2RBP14784 551 aa12.12□□□□□ -0.47
CAPN3-213ENST00000565173 CASZ1Q86V15 1759 aa12.11□□□□□ -0.47
CAPN3-213ENST00000565173 NINLQ9Y2I6 1382 aa12.11□□□□□ -0.47
CAPN3-213ENST00000565173 FBLN1P23142 703 aa12.11□□□□□ -0.47
CAPN3-213ENST00000565173 SLC24A1O60721 1099 aa12.1□□□□□ -0.47
CAPN3-213ENST00000565173 TRIM26Q12899 539 aaPredicted RBP12.1□□□□□ -0.47
CAPN3-213ENST00000565173 ACSBG1Q96GR2 724 aa12.1□□□□□ -0.47
CAPN3-213ENST00000565173 PTGER2P43116 358 aa12.09□□□□□ -0.47
CAPN3-213ENST00000565173 SLC15A2Q16348 729 aa12.09□□□□□ -0.47
CAPN3-213ENST00000565173 NHSQ6T4R5 1651 aa12.09□□□□□ -0.47
CAPN3-213ENST00000565173 MAP3K19Q56UN5 1328 aa12.09□□□□□ -0.47
CAPN3-213ENST00000565173 HOXC9P31274 260 aa12.08□□□□□ -0.48
CAPN3-213ENST00000565173 COG3Q96JB2 828 aa12.08□□□□□ -0.48
CAPN3-213ENST00000565173 ANKRD36BQ8N2N9 1353 aa12.07□□□□□ -0.48
CAPN3-213ENST00000565173 FYB1O15117 783 aa12.07□□□□□ -0.48
CAPN3-213ENST00000565173 ZBTB7AO95365 584 aa12.07□□□□□ -0.48
CAPN3-213ENST00000565173 LTV1Q96GA3 475 aaPredicted RBP12.07□□□□□ -0.48
CAPN3-213ENST00000565173 STK32BQ9NY57 414 aa12.07□□□□□ -0.48
CAPN3-213ENST00000565173 PPP1R1BQ9UD71 204 aaPredicted RBP12.07□□□□□ -0.48
CAPN3-213ENST00000565173 LRRC4BQ9NT99 713 aa12.06□□□□□ -0.48
CAPN3-213ENST00000565173 USP47Q96K76 1375 aa12.05□□□□□ -0.48
CAPN3-213ENST00000565173 TMF1P82094 1093 aa12.05□□□□□ -0.48
CAPN3-213ENST00000565173 DDX54Q8TDD1 881 aaKnown RBP12.05□□□□□ -0.48
CAPN3-213ENST00000565173 SGIP1Q9BQI5 828 aa12.05□□□□□ -0.48
CAPN3-213ENST00000565173 ATF5Q9Y2D1 282 aaPredicted RBP12.05□□□□□ -0.48
CAPN3-213ENST00000565173 BTAF1O14981 1849 aa12.04□□□□□ -0.48
CAPN3-213ENST00000565173 PAPPAQ13219 1627 aa12.04□□□□□ -0.48
CAPN3-213ENST00000565173 FAM208AQ9UK61 1670 aaKnown RBP12.04□□□□□ -0.48
CAPN3-213ENST00000565173 GOLGB1Q14789 3259 aaKnown RBP12.04□□□□□ -0.48
CAPN3-213ENST00000565173 AMPHP49418 695 aa12.04□□□□□ -0.48
CAPN3-213ENST00000565173 RRS1Q15050 365 aaKnown RBP12.04□□□□□ -0.48
CAPN3-213ENST00000565173 GGNBP2Q9H3C7 697 aa12.04□□□□□ -0.48
CAPN3-213ENST00000565173 ZNF827Q17R98 1081 aa12.03□□□□□ -0.48
CAPN3-213ENST00000565173 NBPF6Q5VWK0 638 aa12.03□□□□□ -0.48
CAPN3-213ENST00000565173 NBPF4Q96M43 638 aa12.03□□□□□ -0.48
CAPN3-213ENST00000565173 MTFR1LQ9H019 292 aa12.03□□□□□ -0.48
CAPN3-213ENST00000565173 RGPD2P0DJD1 1756 aa12.02□□□□□ -0.48
CAPN3-213ENST00000565173 PRIM1P49642 420 aaKnown RBP12.02□□□□□ -0.49
CAPN3-213ENST00000565173 ZCRB1Q8TBF4 217 aaKnown RBP12.02□□□□□ -0.49
CAPN3-213ENST00000565173 CARD14Q9BXL6 1004 aa12.02□□□□□ -0.49
CAPN3-213ENST00000565173 MYOM1P52179 1685 aa12.02□□□□□ -0.49
CAPN3-213ENST00000565173 RTL1A6NKG5 1358 aa12.02□□□□□ -0.49
CAPN3-213ENST00000565173 NSD2O96028 1365 aa12.02□□□□□ -0.49
CAPN3-213ENST00000565173 MEGF6O75095 1541 aa12.01□□□□□ -0.49
CAPN3-213ENST00000565173 SHANK3Q9BYB0 1731 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms