RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 PUS7Q96PZ0 661 aaKnown RBP14.16□□□□□ -0.14
CMTM3-209ENST00000565003 RGPD5Q99666 1765 aa14.16□□□□□ -0.14
CMTM3-209ENST00000565003 WDR17Q8IZU2 1322 aa14.15□□□□□ -0.14
CMTM3-209ENST00000565003 DISP2A7MBM2 1401 aa14.15□□□□□ -0.14
CMTM3-209ENST00000565003 USP47Q96K76 1375 aa14.15□□□□□ -0.14
CMTM3-209ENST00000565003 EN1Q05925 392 aaPredicted RBP14.15□□□□□ -0.14
CMTM3-209ENST00000565003 FAM196AQ6ZSG2 479 aa14.15□□□□□ -0.14
CMTM3-209ENST00000565003 LRRC37A3O60309 1634 aa14.15□□□□□ -0.14
CMTM3-209ENST00000565003 WNK3Q9BYP7 1800 aa14.14□□□□□ -0.15
CMTM3-209ENST00000565003 TRIM37O94972 964 aa14.14□□□□□ -0.15
CMTM3-209ENST00000565003 PDE3BQ13370 1112 aa14.14□□□□□ -0.15
CMTM3-209ENST00000565003 TOM1L2Q6ZVM7 507 aa14.14□□□□□ -0.15
CMTM3-209ENST00000565003 TERF2IPQ9NYB0 399 aa14.14□□□□□ -0.15
CMTM3-209ENST00000565003 ABCC6O95255 1503 aa14.14□□□□□ -0.15
CMTM3-209ENST00000565003 OVOS2A0A0J9YW53 1432 aa14.14□□□□□ -0.15
CMTM3-209ENST00000565003 OVOS2Q6IE36 1432 aa14.14□□□□□ -0.15
CMTM3-209ENST00000565003 NINLQ9Y2I6 1382 aa14.13□□□□□ -0.15
CMTM3-209ENST00000565003 PCGF6Q9BYE7 350 aa14.13□□□□□ -0.15
CMTM3-209ENST00000565003 PEAK1Q9H792 1746 aa14.12□□□□□ -0.15
CMTM3-209ENST00000565003 LTN1O94822 1766 aa14.11□□□□□ -0.15
CMTM3-209ENST00000565003 CLSPNQ9HAW4 1339 aa14.11□□□□□ -0.15
CMTM3-209ENST00000565003 SRCAPQ6ZRS2 3230 aa14.11□□□□□ -0.15
CMTM3-209ENST00000565003 SLC24A1O60721 1099 aa14.1□□□□□ -0.15
CMTM3-209ENST00000565003 CSB-PGBD3P0DP91 1061 aa14.1□□□□□ -0.15
CMTM3-209ENST00000565003 EZH2Q15910 746 aaKnown RBP14.1□□□□□ -0.15
CMTM3-209ENST00000565003 CARD10Q9BWT7 1032 aa14.1□□□□□ -0.15
CMTM3-209ENST00000565003 OVOS2A0A0G2JMS6 1433 aa14.09□□□□□ -0.15
CMTM3-209ENST00000565003 DDB1Q16531 1140 aa14.09□□□□□ -0.15
CMTM3-209ENST00000565003 CAMKK2Q96RR4 588 aa14.09□□□□□ -0.15
CMTM3-209ENST00000565003 TIMELESSQ9UNS1 1208 aa14.09□□□□□ -0.15
CMTM3-209ENST00000565003 ANKRD36BQ8N2N9 1353 aa14.09□□□□□ -0.15
CMTM3-209ENST00000565003 PSDA5PKW4 1024 aaPredicted RBP14.08□□□□□ -0.16
CMTM3-209ENST00000565003 APBA3O96018 575 aa14.08□□□□□ -0.16
CMTM3-209ENST00000565003 TMF1P82094 1093 aa14.08□□□□□ -0.16
CMTM3-209ENST00000565003 ERBB3P21860 1342 aa14.08□□□□□ -0.16
CMTM3-209ENST00000565003 CCDC7Q96M83 1385 aa14.08□□□□□ -0.16
CMTM3-209ENST00000565003 CDCA7Q9BWT1 371 aaPredicted RBP14.07□□□□□ -0.16
CMTM3-209ENST00000565003 MARCH10Q8NA82 808 aaPredicted RBP14.06□□□□□ -0.16
CMTM3-209ENST00000565003 RREB1Q92766 1687 aa14.06□□□□□ -0.16
CMTM3-209ENST00000565003 PARD3Q8TEW0 1356 aa14.06□□□□□ -0.16
CMTM3-209ENST00000565003 SBF2Q86WG5 1849 aa14.06□□□□□ -0.16
CMTM3-209ENST00000565003 ANKRD24Q8TF21 1146 aa14.05□□□□□ -0.16
CMTM3-209ENST00000565003 TNS2Q63HR2 1409 aa14.05□□□□□ -0.16
CMTM3-209ENST00000565003 MYOM1P52179 1685 aa14.04□□□□□ -0.16
CMTM3-209ENST00000565003 NUP188Q5SRE5 1749 aa14.04□□□□□ -0.16
CMTM3-209ENST00000565003 C11orf95C9JLR9 678 aaPredicted RBP14.04□□□□□ -0.16
CMTM3-209ENST00000565003 R3HDM1Q15032 1099 aaKnown RBP14.04□□□□□ -0.16
CMTM3-209ENST00000565003 COG3Q96JB2 828 aa14.04□□□□□ -0.16
CMTM3-209ENST00000565003 NLRP2Q9NX02 1062 aa14.04□□□□□ -0.16
CMTM3-209ENST00000565003 BCL9O00512 1426 aa14.04□□□□□ -0.16
CMTM3-209ENST00000565003 LRP5O75197 1615 aa14.04□□□□□ -0.16
CMTM3-209ENST00000565003 FBLN1P23142 703 aa14.03□□□□□ -0.16
CMTM3-209ENST00000565003 PTF1AQ7RTS3 328 aa14.03□□□□□ -0.16
CMTM3-209ENST00000565003 MAP3K19Q56UN5 1328 aa14.03□□□□□ -0.16
CMTM3-209ENST00000565003 FYB1O15117 783 aa14.02□□□□□ -0.17
CMTM3-209ENST00000565003 CDCA8Q53HL2 280 aa14.02□□□□□ -0.17
CMTM3-209ENST00000565003 IP6K1Q92551 441 aa14.02□□□□□ -0.17
CMTM3-209ENST00000565003 GGNBP2Q9H3C7 697 aa14.02□□□□□ -0.17
CMTM3-209ENST00000565003 EXOC5O00471 708 aa14.01□□□□□ -0.17
CMTM3-209ENST00000565003 KIF20BQ96Q89 1820 aa14□□□□□ -0.17
CMTM3-209ENST00000565003 IL2RBP14784 551 aa14□□□□□ -0.17
CMTM3-209ENST00000565003 HOXC9P31274 260 aa14□□□□□ -0.17
CMTM3-209ENST00000565003 CCER1Q8TC90 406 aaPredicted RBP14□□□□□ -0.17
CMTM3-209ENST00000565003 BCL11BQ9C0K0 894 aaPredicted RBP14□□□□□ -0.17
CMTM3-209ENST00000565003 RGPD3A6NKT7 1758 aaPredicted RBP14□□□□□ -0.17
CMTM3-209ENST00000565003 RGPD4Q7Z3J3 1758 aa14□□□□□ -0.17
CMTM3-209ENST00000565003 FAM208AQ9UK61 1670 aaKnown RBP14□□□□□ -0.17
CMTM3-209ENST00000565003 RRS1Q15050 365 aaKnown RBP13.99□□□□□ -0.17
CMTM3-209ENST00000565003 LTV1Q96GA3 475 aaPredicted RBP13.99□□□□□ -0.17
CMTM3-209ENST00000565003 CARD14Q9BXL6 1004 aa13.99□□□□□ -0.17
CMTM3-209ENST00000565003 NSD3Q9BZ95 1437 aa13.98□□□□□ -0.17
CMTM3-209ENST00000565003 PLSCR1O15162 318 aa13.98□□□□□ -0.17
CMTM3-209ENST00000565003 RTL1A6NKG5 1358 aa13.97□□□□□ -0.17
CMTM3-209ENST00000565003 AMPHP49418 695 aa13.97□□□□□ -0.17
CMTM3-209ENST00000565003 NHSQ6T4R5 1651 aa13.97□□□□□ -0.17
CMTM3-209ENST00000565003 RGPD2P0DJD1 1756 aa13.96□□□□□ -0.17
CMTM3-209ENST00000565003 KCNQ2O43526 872 aa13.96□□□□□ -0.17
CMTM3-209ENST00000565003 NBPF14Q5TI25 921 aa13.95□□□□□ -0.18
CMTM3-209ENST00000565003 PROM2Q8N271 834 aa13.95□□□□□ -0.18
CMTM3-209ENST00000565003 ACSBG1Q96GR2 724 aa13.94□□□□□ -0.18
CMTM3-209ENST00000565003 ANO8Q9HCE9 1232 aaPredicted RBP13.94□□□□□ -0.18
CMTM3-209ENST00000565003 MEGF6O75095 1541 aa13.94□□□□□ -0.18
CMTM3-209ENST00000565003 HSPA5P11021 654 aaKnown RBP13.93□□□□□ -0.18
CMTM3-209ENST00000565003 EIF4G2P78344 907 aaKnown RBP eCLIP13.93□□□□□ -0.18
CMTM3-209ENST00000565003 NBPF6Q5VWK0 638 aa13.92□□□□□ -0.18
CMTM3-209ENST00000565003 NBPF4Q96M43 638 aa13.92□□□□□ -0.18
CMTM3-209ENST00000565003 POLR3GLQ9BT43 218 aa13.92□□□□□ -0.18
CMTM3-209ENST00000565003 INSRP06213 1382 aa13.92□□□□□ -0.18
CMTM3-209ENST00000565003 FLT4P35916 1363 aa13.92□□□□□ -0.18
CMTM3-209ENST00000565003 SHANK3Q9BYB0 1731 aa13.92□□□□□ -0.18
CMTM3-209ENST00000565003 BTAF1O14981 1849 aa13.92□□□□□ -0.18
CMTM3-209ENST00000565003 SMG6Q86US8 1419 aaKnown RBP13.91□□□□□ -0.18
CMTM3-209ENST00000565003 TXNRD1Q16881 649 aa13.91□□□□□ -0.18
CMTM3-209ENST00000565003 HSP90AB2PQ58FF8 381 aa13.91□□□□□ -0.18
CMTM3-209ENST00000565003 USHBP1Q8N6Y0 703 aa13.91□□□□□ -0.18
CMTM3-209ENST00000565003 DDX54Q8TDD1 881 aaKnown RBP13.9□□□□□ -0.18
CMTM3-209ENST00000565003 EMILIN1Q9Y6C2 1016 aa13.9□□□□□ -0.18
CMTM3-209ENST00000565003 KIF24Q5T7B8 1368 aa13.9□□□□□ -0.18
CMTM3-209ENST00000565003 ANKRD26Q9UPS8 1709 aa13.9□□□□□ -0.18
CMTM3-209ENST00000565003 CGNL1Q0VF96 1302 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms