RNA–Protein interactions for RNA: ENST00000564793.1

CFDP1-204, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 457 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-204ENST00000564793 MMRN1Q13201 1228 aa8.56□□□□□ -1.04
CFDP1-204ENST00000564793 ZNF777Q9ULD5 760 aaPredicted RBP8.56□□□□□ -1.04
CFDP1-204ENST00000564793 CARMIL1Q5VZK9 1371 aa8.56□□□□□ -1.04
CFDP1-204ENST00000564793 CCDC24Q8N4L8 307 aa8.55□□□□□ -1.04
CFDP1-204ENST00000564793 ABCC10Q5T3U5 1492 aa8.55□□□□□ -1.04
CFDP1-204ENST00000564793 PRXQ9BXM0 1461 aa8.55□□□□□ -1.04
CFDP1-204ENST00000564793 SAMD9Q5K651 1589 aa8.55□□□□□ -1.04
CFDP1-204ENST00000564793 TSPOAP1O95153 1857 aa8.55□□□□□ -1.04
CFDP1-204ENST00000564793 MAP3K4Q9Y6R4 1608 aa8.54□□□□□ -1.04
CFDP1-204ENST00000564793 UHRF1BP1LA0JNW5 1464 aa8.54□□□□□ -1.04
CFDP1-204ENST00000564793 KCNH2Q12809 1159 aa8.54□□□□□ -1.04
CFDP1-204ENST00000564793 EVA1BQ9NVM1 165 aa8.54□□□□□ -1.04
CFDP1-204ENST00000564793 POM121CA8CG34 1229 aa8.53□□□□□ -1.04
CFDP1-204ENST00000564793 PNMA1Q8ND90 353 aa8.53□□□□□ -1.04
CFDP1-204ENST00000564793 FKBPLQ9UIM3 349 aa8.53□□□□□ -1.04
CFDP1-204ENST00000564793 FCF1Q9Y324 198 aaKnown RBP8.53□□□□□ -1.04
CFDP1-204ENST00000564793 GLI2P10070 1586 aa8.52□□□□□ -1.04
CFDP1-204ENST00000564793 VAC14Q08AM6 782 aa8.52□□□□□ -1.05
CFDP1-204ENST00000564793 ABCA8O94911 1581 aa8.52□□□□□ -1.05
CFDP1-204ENST00000564793 PTCRAQ6ISU1 281 aaPredicted RBP8.51□□□□□ -1.05
CFDP1-204ENST00000564793 ARID3AQ99856 593 aa8.51□□□□□ -1.05
CFDP1-204ENST00000564793 KDM5BQ9UGL1 1544 aa8.5□□□□□ -1.05
CFDP1-204ENST00000564793 PPEF1O14829 653 aaPredicted RBP8.5□□□□□ -1.05
CFDP1-204ENST00000564793 WASHC4Q2M389 1173 aa8.5□□□□□ -1.05
CFDP1-204ENST00000564793 UNC93B1Q9H1C4 597 aa8.5□□□□□ -1.05
CFDP1-204ENST00000564793 KDM6BO15054 1643 aa8.5□□□□□ -1.05
CFDP1-204ENST00000564793 KIF21BO75037 1637 aa8.5□□□□□ -1.05
CFDP1-204ENST00000564793 ZC3H4Q9UPT8 1303 aaKnown RBP8.5□□□□□ -1.05
CFDP1-204ENST00000564793 TNIKQ9UKE5 1360 aa8.49□□□□□ -1.05
CFDP1-204ENST00000564793 CARMIL2Q6F5E8 1435 aa8.49□□□□□ -1.05
CFDP1-204ENST00000564793 CCDC82Q8N4S0 544 aa8.49□□□□□ -1.05
CFDP1-204ENST00000564793 PLSCR2Q9NRY7 297 aa8.49□□□□□ -1.05
CFDP1-204ENST00000564793 FBXO45P0C2W1 286 aa8.48□□□□□ -1.05
CFDP1-204ENST00000564793 ARMC2Q8NEN0 867 aa8.48□□□□□ -1.05
CFDP1-204ENST00000564793 CFAP43Q8NDM7 1665 aa8.48□□□□□ -1.05
CFDP1-204ENST00000564793 RNF223E7ERA6 249 aa8.47□□□□□ -1.05
CFDP1-204ENST00000564793 NBPF14Q5TI25 921 aa8.47□□□□□ -1.05
CFDP1-204ENST00000564793 ADAMTS19Q8TE59 1207 aa8.47□□□□□ -1.05
CFDP1-204ENST00000564793 GLMNQ92990 594 aa8.47□□□□□ -1.05
CFDP1-204ENST00000564793 PTPRGP23470 1445 aa8.46□□□□□ -1.05
CFDP1-204ENST00000564793 ZBBXA8MT70 800 aa8.46□□□□□ -1.06
CFDP1-204ENST00000564793 GGCXP38435 758 aa8.46□□□□□ -1.06
CFDP1-204ENST00000564793 NR1H3Q13133 447 aa8.46□□□□□ -1.06
CFDP1-204ENST00000564793 LINC01559Q495D7 138 aa8.46□□□□□ -1.06
CFDP1-204ENST00000564793 CALR3Q96L12 384 aaKnown RBP8.46□□□□□ -1.06
CFDP1-204ENST00000564793 UACAQ9BZF9 1416 aa8.46□□□□□ -1.06
CFDP1-204ENST00000564793 GOLGA3Q08378 1498 aa8.45□□□□□ -1.06
CFDP1-204ENST00000564793 PPP1R18Q6NYC8 613 aa8.45□□□□□ -1.06
CFDP1-204ENST00000564793 GPKOWQ92917 476 aaPredicted RBP eCLIP8.45□□□□□ -1.06
CFDP1-204ENST00000564793 ASXL2Q76L83 1435 aa8.45□□□□□ -1.06
CFDP1-204ENST00000564793 PLB1Q6P1J6 1458 aa8.45□□□□□ -1.06
CFDP1-204ENST00000564793 EPRSP07814 1512 aaKnown RBP8.44□□□□□ -1.06
CFDP1-204ENST00000564793 RAPGEF6Q8TEU7 1601 aa8.44□□□□□ -1.06
CFDP1-204ENST00000564793 PLA2G2CQ5R387 149 aa8.44□□□□□ -1.06
CFDP1-204ENST00000564793 HDGFL1Q5TGJ6 251 aa8.44□□□□□ -1.06
CFDP1-204ENST00000564793 PDXDC2PQ6P474 469 aa8.44□□□□□ -1.06
CFDP1-204ENST00000564793 ANKLE1Q8NAG6 615 aa8.44□□□□□ -1.06
CFDP1-204ENST00000564793 BAP1Q92560 729 aa8.44□□□□□ -1.06
CFDP1-204ENST00000564793 CCDC97Q96F63 343 aaPredicted RBP8.44□□□□□ -1.06
CFDP1-204ENST00000564793 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.44□□□□□ -1.06
CFDP1-204ENST00000564793 PTK2Q05397 1052 aa8.43□□□□□ -1.06
CFDP1-204ENST00000564793 OCSTAMPQ9BR26 566 aa8.43□□□□□ -1.06
CFDP1-204ENST00000564793 EEA1Q15075 1411 aa8.43□□□□□ -1.06
CFDP1-204ENST00000564793 WDR7Q9Y4E6 1490 aa8.43□□□□□ -1.06
CFDP1-204ENST00000564793 SH3BP5LQ7L8J4 393 aa8.42□□□□□ -1.06
CFDP1-204ENST00000564793 ARHGAP9Q9BRR9 750 aa8.42□□□□□ -1.06
CFDP1-204ENST00000564793 ALG2Q9H553 416 aa8.42□□□□□ -1.06
CFDP1-204ENST00000564793 GPSM3Q9Y4H4 160 aa8.42□□□□□ -1.06
CFDP1-204ENST00000564793 ABCA9Q8IUA7 1624 aa8.42□□□□□ -1.06
CFDP1-204ENST00000564793 LRRIQ1Q96JM4 1722 aa8.41□□□□□ -1.06
CFDP1-204ENST00000564793 EFCAB5A4FU69 1503 aa8.41□□□□□ -1.06
CFDP1-204ENST00000564793 SOX11P35716 441 aa8.41□□□□□ -1.06
CFDP1-204ENST00000564793 EIF4G2P78344 907 aaKnown RBP eCLIP8.41□□□□□ -1.06
CFDP1-204ENST00000564793 ZNF511Q8NB15 262 aa8.41□□□□□ -1.06
CFDP1-204ENST00000564793 CARD14Q9BXL6 1004 aa8.41□□□□□ -1.06
CFDP1-204ENST00000564793 SERPINA10Q9UK55 444 aa8.41□□□□□ -1.06
CFDP1-204ENST00000564793 MAGEB6P1A0A0J9YX57 407 aa8.4□□□□□ -1.06
CFDP1-204ENST00000564793 ZBTB24O43167 697 aaPredicted RBP8.4□□□□□ -1.06
CFDP1-204ENST00000564793 TRIM32Q13049 653 aa8.4□□□□□ -1.06
CFDP1-204ENST00000564793 SEMA3FQ13275 785 aa8.4□□□□□ -1.06
CFDP1-204ENST00000564793 ADAM32Q8TC27 787 aa8.4□□□□□ -1.06
CFDP1-204ENST00000564793 FOXJ1Q92949 421 aa8.4□□□□□ -1.06
CFDP1-204ENST00000564793 AGERQ15109 404 aa8.39□□□□□ -1.07
CFDP1-204ENST00000564793 PCDHB9Q9Y5E1 797 aa8.39□□□□□ -1.07
CFDP1-204ENST00000564793 SH3BP2P78314 561 aa8.38□□□□□ -1.07
CFDP1-204ENST00000564793 C4orf48Q5BLP8 95 aa8.38□□□□□ -1.07
CFDP1-204ENST00000564793 IFFO2Q5TF58 517 aa8.38□□□□□ -1.07
CFDP1-204ENST00000564793 SH3RF1Q7Z6J0 888 aa8.38□□□□□ -1.07
CFDP1-204ENST00000564793 ZBTB33Q86T24 672 aa8.38□□□□□ -1.07
CFDP1-204ENST00000564793 BPHLQ86WA6 291 aaPredicted RBP8.38□□□□□ -1.07
CFDP1-204ENST00000564793 FRMPD1Q5SYB0 1578 aa8.37□□□□□ -1.07
CFDP1-204ENST00000564793 UCN2Q96RP3 112 aa8.37□□□□□ -1.07
CFDP1-204ENST00000564793 PLA2G2EQ9NZK7 142 aa8.37□□□□□ -1.07
CFDP1-204ENST00000564793 NUP153P49790 1475 aaKnown RBP8.37□□□□□ -1.07
CFDP1-204ENST00000564793 MAGI3Q5TCQ9 1506 aa8.36□□□□□ -1.07
CFDP1-204ENST00000564793 SKOR1P84550 965 aa8.36□□□□□ -1.07
CFDP1-204ENST00000564793 EMID1Q96A84 441 aaPredicted RBP8.36□□□□□ -1.07
CFDP1-204ENST00000564793 TEX14Q8IWB6 1497 aa8.36□□□□□ -1.07
CFDP1-204ENST00000564793 COL17A1Q9UMD9 1497 aaPredicted RBP8.36□□□□□ -1.07
CFDP1-204ENST00000564793 RPIAP49247 311 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms