RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 AXIN2Q9Y2T1 843 aa17.21■□□□□ 0.35
GTF3C1-204ENST00000564664 CARD10Q9BWT7 1032 aa17.2■□□□□ 0.34
GTF3C1-204ENST00000564664 EZH2Q15910 746 aaKnown RBP17.18■□□□□ 0.34
GTF3C1-204ENST00000564664 DDB1Q16531 1140 aa17.18■□□□□ 0.34
GTF3C1-204ENST00000564664 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.18■□□□□ 0.34
GTF3C1-204ENST00000564664 SLC12A5Q9H2X9 1139 aa17.18■□□□□ 0.34
GTF3C1-204ENST00000564664 COL18A1P39060 1754 aa17.17■□□□□ 0.34
GTF3C1-204ENST00000564664 NINLQ9Y2I6 1382 aa17.17■□□□□ 0.34
GTF3C1-204ENST00000564664 CSB-PGBD3P0DP91 1061 aa17.17■□□□□ 0.34
GTF3C1-204ENST00000564664 PARP4Q9UKK3 1724 aaKnown RBP17.16■□□□□ 0.34
GTF3C1-204ENST00000564664 TESK2Q96S53 571 aa17.16■□□□□ 0.34
GTF3C1-204ENST00000564664 ABCC6O95255 1503 aa17.16■□□□□ 0.34
GTF3C1-204ENST00000564664 EDC4Q6P2E9 1401 aaKnown RBP17.15■□□□□ 0.34
GTF3C1-204ENST00000564664 ST20-MTHFSA0A0A6YYL1 179 aa17.15■□□□□ 0.34
GTF3C1-204ENST00000564664 SOX12O15370 315 aa17.15■□□□□ 0.34
GTF3C1-204ENST00000564664 NBPF14Q5TI25 921 aa17.15■□□□□ 0.34
GTF3C1-204ENST00000564664 TIMELESSQ9UNS1 1208 aa17.15■□□□□ 0.34
GTF3C1-204ENST00000564664 OVOS2A0A0G2JMS6 1433 aa17.14■□□□□ 0.33
GTF3C1-204ENST00000564664 OVOS2A0A0J9YW53 1432 aa17.14■□□□□ 0.33
GTF3C1-204ENST00000564664 OVOS2Q6IE36 1432 aa17.14■□□□□ 0.33
GTF3C1-204ENST00000564664 CD163L1Q9NR16 1453 aa17.14■□□□□ 0.33
GTF3C1-204ENST00000564664 MON2Q7Z3U7 1717 aa17.14■□□□□ 0.33
GTF3C1-204ENST00000564664 TNS1Q9HBL0 1735 aaKnown RBP17.14■□□□□ 0.33
GTF3C1-204ENST00000564664 PSDA5PKW4 1024 aaPredicted RBP17.14■□□□□ 0.33
GTF3C1-204ENST00000564664 EXOC5O00471 708 aa17.14■□□□□ 0.33
GTF3C1-204ENST00000564664 CCDC7Q96M83 1385 aa17.14■□□□□ 0.33
GTF3C1-204ENST00000564664 BCL9O00512 1426 aa17.13■□□□□ 0.33
GTF3C1-204ENST00000564664 NFAT5O94916 1531 aa17.13■□□□□ 0.33
GTF3C1-204ENST00000564664 PLSCR1O15162 318 aa17.13■□□□□ 0.33
GTF3C1-204ENST00000564664 NME9Q86XW9 330 aa17.13■□□□□ 0.33
GTF3C1-204ENST00000564664 R3HDM1Q15032 1099 aaKnown RBP17.12■□□□□ 0.33
GTF3C1-204ENST00000564664 BCL11BQ9C0K0 894 aaPredicted RBP17.12■□□□□ 0.33
GTF3C1-204ENST00000564664 USP54Q70EL1 1684 aa17.1■□□□□ 0.33
GTF3C1-204ENST00000564664 TMF1P82094 1093 aa17.1■□□□□ 0.33
GTF3C1-204ENST00000564664 CDCA8Q53HL2 280 aa17.1■□□□□ 0.33
GTF3C1-204ENST00000564664 MARCH10Q8NA82 808 aaPredicted RBP17.1■□□□□ 0.33
GTF3C1-204ENST00000564664 A0A1W2PP64 1363 aa17.1■□□□□ 0.33
GTF3C1-204ENST00000564664 LRP5O75197 1615 aa17.1■□□□□ 0.33
GTF3C1-204ENST00000564664 ERBB3P21860 1342 aa17.09■□□□□ 0.33
GTF3C1-204ENST00000564664 CLSPNQ9HAW4 1339 aa17.09■□□□□ 0.33
GTF3C1-204ENST00000564664 IP6K1Q92551 441 aa17.07■□□□□ 0.32
GTF3C1-204ENST00000564664 COG3Q96JB2 828 aa17.07■□□□□ 0.32
GTF3C1-204ENST00000564664 NLRP2Q9NX02 1062 aa17.07■□□□□ 0.32
GTF3C1-204ENST00000564664 RGPD5Q99666 1765 aa17.07■□□□□ 0.32
GTF3C1-204ENST00000564664 PEAK1Q9H792 1746 aa17.07■□□□□ 0.32
GTF3C1-204ENST00000564664 ANKRD24Q8TF21 1146 aa17.06■□□□□ 0.32
GTF3C1-204ENST00000564664 ANKRD36BQ8N2N9 1353 aa17.05■□□□□ 0.32
GTF3C1-204ENST00000564664 IL2RBP14784 551 aa17.05■□□□□ 0.32
GTF3C1-204ENST00000564664 LRRC37A3O60309 1634 aa17.05■□□□□ 0.32
GTF3C1-204ENST00000564664 USP47Q96K76 1375 aa17.04■□□□□ 0.32
GTF3C1-204ENST00000564664 RREB1Q92766 1687 aa17.03■□□□□ 0.32
GTF3C1-204ENST00000564664 SBF2Q86WG5 1849 aa17.03■□□□□ 0.32
GTF3C1-204ENST00000564664 WNK3Q9BYP7 1800 aa17.02■□□□□ 0.31
GTF3C1-204ENST00000564664 RGPD3A6NKT7 1758 aaPredicted RBP17.01■□□□□ 0.31
GTF3C1-204ENST00000564664 RGPD4Q7Z3J3 1758 aa17.01■□□□□ 0.31
GTF3C1-204ENST00000564664 TNS2Q63HR2 1409 aa17.01■□□□□ 0.31
GTF3C1-204ENST00000564664 LTN1O94822 1766 aa17■□□□□ 0.31
GTF3C1-204ENST00000564664 FYB1O15117 783 aa16.99■□□□□ 0.31
GTF3C1-204ENST00000564664 AMPHP49418 695 aa16.99■□□□□ 0.31
GTF3C1-204ENST00000564664 PROM2Q8N271 834 aa16.99■□□□□ 0.31
GTF3C1-204ENST00000564664 NUP188Q5SRE5 1749 aa16.99■□□□□ 0.31
GTF3C1-204ENST00000564664 MAP3K19Q56UN5 1328 aa16.98■□□□□ 0.31
GTF3C1-204ENST00000564664 HOXC9P31274 260 aa16.98■□□□□ 0.31
GTF3C1-204ENST00000564664 PTF1AQ7RTS3 328 aa16.98■□□□□ 0.31
GTF3C1-204ENST00000564664 SPON1Q9HCB6 807 aa16.98■□□□□ 0.31
GTF3C1-204ENST00000564664 KCNQ2O43526 872 aa16.97■□□□□ 0.31
GTF3C1-204ENST00000564664 TXNRD1Q16881 649 aa16.97■□□□□ 0.31
GTF3C1-204ENST00000564664 PCGF6Q9BYE7 350 aa16.96■□□□□ 0.31
GTF3C1-204ENST00000564664 RTL1A6NKG5 1358 aa16.95■□□□□ 0.3
GTF3C1-204ENST00000564664 LTV1Q96GA3 475 aaPredicted RBP16.95■□□□□ 0.3
GTF3C1-204ENST00000564664 STK32BQ9NY57 414 aa16.94■□□□□ 0.3
GTF3C1-204ENST00000564664 CGNL1Q0VF96 1302 aa16.94■□□□□ 0.3
GTF3C1-204ENST00000564664 KIF24Q5T7B8 1368 aa16.93■□□□□ 0.3
GTF3C1-204ENST00000564664 GGNBP2Q9H3C7 697 aa16.93■□□□□ 0.3
GTF3C1-204ENST00000564664 FAM208AQ9UK61 1670 aaKnown RBP16.93■□□□□ 0.3
GTF3C1-204ENST00000564664 FBLN1P23142 703 aa16.92■□□□□ 0.3
GTF3C1-204ENST00000564664 SLC15A2Q16348 729 aa16.92■□□□□ 0.3
GTF3C1-204ENST00000564664 DDX54Q8TDD1 881 aaKnown RBP16.92■□□□□ 0.3
GTF3C1-204ENST00000564664 ACSBG1Q96GR2 724 aa16.92■□□□□ 0.3
GTF3C1-204ENST00000564664 ZCRB1Q8TBF4 217 aaKnown RBP16.91■□□□□ 0.3
GTF3C1-204ENST00000564664 ANO8Q9HCE9 1232 aaPredicted RBP16.91■□□□□ 0.3
GTF3C1-204ENST00000564664 PPP1R1BQ9UD71 204 aaPredicted RBP16.91■□□□□ 0.3
GTF3C1-204ENST00000564664 RRS1Q15050 365 aaKnown RBP16.9■□□□□ 0.3
GTF3C1-204ENST00000564664 CARD14Q9BXL6 1004 aa16.9■□□□□ 0.3
GTF3C1-204ENST00000564664 KAT6BQ8WYB5 2073 aa16.9■□□□□ 0.3
GTF3C1-204ENST00000564664 SMG6Q86US8 1419 aaKnown RBP16.89■□□□□ 0.29
GTF3C1-204ENST00000564664 NHSQ6T4R5 1651 aa16.89■□□□□ 0.29
GTF3C1-204ENST00000564664 SLC27A3Q5K4L6 730 aa16.89■□□□□ 0.29
GTF3C1-204ENST00000564664 INSRP06213 1382 aa16.89■□□□□ 0.29
GTF3C1-204ENST00000564664 HMGB2P26583 209 aaKnown RBP16.88■□□□□ 0.29
GTF3C1-204ENST00000564664 NBPF6Q5VWK0 638 aa16.88■□□□□ 0.29
GTF3C1-204ENST00000564664 NBPF4Q96M43 638 aa16.88■□□□□ 0.29
GTF3C1-204ENST00000564664 DCAF8L1A6NGE4 600 aa16.87■□□□□ 0.29
GTF3C1-204ENST00000564664 RAPGEF4Q8WZA2 1011 aa16.87■□□□□ 0.29
GTF3C1-204ENST00000564664 FLT4P35916 1363 aa16.87■□□□□ 0.29
GTF3C1-204ENST00000564664 EIF4G2P78344 907 aaKnown RBP eCLIP16.86■□□□□ 0.29
GTF3C1-204ENST00000564664 HSP90AB2PQ58FF8 381 aa16.86■□□□□ 0.29
GTF3C1-204ENST00000564664 TATP17735 454 aaPredicted RBP16.85■□□□□ 0.29
GTF3C1-204ENST00000564664 PRIM1P49642 420 aaKnown RBP16.85■□□□□ 0.29
GTF3C1-204ENST00000564664 MTFR1LQ9H019 292 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 159.4 ms