RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 DHX9Q08211 1270 aaKnown RBP10.22□□□□□ -0.77
CHD9-212ENST00000564641 TERTO14746 1132 aaKnown RBP10.21□□□□□ -0.77
CHD9-212ENST00000564641 NBPF20Q3BBV1 942 aa10.21□□□□□ -0.77
CHD9-212ENST00000564641 LCE2AQ5TA79 106 aaPredicted RBP10.21□□□□□ -0.77
CHD9-212ENST00000564641 NPAS3Q8IXF0 933 aa10.21□□□□□ -0.77
CHD9-212ENST00000564641 ZFAND3Q9H8U3 227 aa10.21□□□□□ -0.77
CHD9-212ENST00000564641 HMX1Q9NP08 348 aaPredicted RBP10.21□□□□□ -0.77
CHD9-212ENST00000564641 PGPEP1Q9NXJ5 209 aa10.21□□□□□ -0.77
CHD9-212ENST00000564641 NFX1Q12986 1120 aaKnown RBP10.2□□□□□ -0.78
CHD9-212ENST00000564641 KCTD15Q96SI1 283 aaPredicted RBP10.2□□□□□ -0.78
CHD9-212ENST00000564641 BANK1Q8NDB2 785 aa10.19□□□□□ -0.78
CHD9-212ENST00000564641 ADAM32Q8TC27 787 aa10.19□□□□□ -0.78
CHD9-212ENST00000564641 EPS8L1Q8TE68 723 aa10.19□□□□□ -0.78
CHD9-212ENST00000564641 TRIM52Q96A61 297 aa10.19□□□□□ -0.78
CHD9-212ENST00000564641 PURBQ96QR8 312 aaKnown RBP10.19□□□□□ -0.78
CHD9-212ENST00000564641 SOCS7O14512 581 aa10.18□□□□□ -0.78
CHD9-212ENST00000564641 MEIOBQ8N635 442 aa10.18□□□□□ -0.78
CHD9-212ENST00000564641 SLC16A10Q8TF71 515 aa10.18□□□□□ -0.78
CHD9-212ENST00000564641 NXF1Q9UBU9 619 aaKnown RBP10.18□□□□□ -0.78
CHD9-212ENST00000564641 APBB1O00213 710 aa10.17□□□□□ -0.78
CHD9-212ENST00000564641 LINC00528Q8N1L1 170 aa10.17□□□□□ -0.78
CHD9-212ENST00000564641 OCSTAMPQ9BR26 566 aa10.17□□□□□ -0.78
CHD9-212ENST00000564641 TSEN34Q9BSV6 310 aaKnown RBP10.17□□□□□ -0.78
CHD9-212ENST00000564641 PPP1R26Q5T8A7 1209 aaPredicted RBP10.16□□□□□ -0.78
CHD9-212ENST00000564641 TRIM34Q9BYJ4 488 aa10.16□□□□□ -0.78
CHD9-212ENST00000564641 BMP2P12643 396 aa10.15□□□□□ -0.78
CHD9-212ENST00000564641 DZIP3Q86Y13 1208 aaKnown RBP10.15□□□□□ -0.78
CHD9-212ENST00000564641 C6orf118Q5T5N4 469 aa10.13□□□□□ -0.79
CHD9-212ENST00000564641 Q6ZVU0 165 aa10.13□□□□□ -0.79
CHD9-212ENST00000564641 ZNF592Q92610 1267 aa10.13□□□□□ -0.79
CHD9-212ENST00000564641 ZBBXA8MT70 800 aa10.12□□□□□ -0.79
CHD9-212ENST00000564641 WIPF1O43516 503 aa10.12□□□□□ -0.79
CHD9-212ENST00000564641 MAN1A2O60476 641 aa10.12□□□□□ -0.79
CHD9-212ENST00000564641 INTS6LQ5JSJ4 861 aaKnown RBP10.12□□□□□ -0.79
CHD9-212ENST00000564641 CCDC125Q86Z20 511 aa10.12□□□□□ -0.79
CHD9-212ENST00000564641 SEPT12Q8IYM1 358 aa10.12□□□□□ -0.79
CHD9-212ENST00000564641 GJD4Q96KN9 370 aaPredicted RBP10.12□□□□□ -0.79
CHD9-212ENST00000564641 IRF7Q92985 503 aa10.11□□□□□ -0.79
CHD9-212ENST00000564641 MCCD1P59942 119 aaPredicted RBP10.1□□□□□ -0.79
CHD9-212ENST00000564641 INSM1Q01101 510 aaPredicted RBP10.09□□□□□ -0.79
CHD9-212ENST00000564641 ZNF330Q9Y3S2 320 aaPredicted RBP10.09□□□□□ -0.79
CHD9-212ENST00000564641 H3BM21 787 aa10.08□□□□□ -0.8
CHD9-212ENST00000564641 NDUFB9Q9Y6M9 179 aa10.08□□□□□ -0.8
CHD9-212ENST00000564641 SOS2Q07890 1332 aaPredicted RBP10.07□□□□□ -0.8
CHD9-212ENST00000564641 ESPNB1AK53 854 aa10.07□□□□□ -0.8
CHD9-212ENST00000564641 SPINT1O43278 529 aa10.06□□□□□ -0.8
CHD9-212ENST00000564641 CBLBQ13191 982 aa10.06□□□□□ -0.8
CHD9-212ENST00000564641 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.06□□□□□ -0.8
CHD9-212ENST00000564641 PRM3Q9NNZ6 103 aa10.06□□□□□ -0.8
CHD9-212ENST00000564641 TTLL8A6PVC2 850 aa10.05□□□□□ -0.8
CHD9-212ENST00000564641 FBXO45P0C2W1 286 aa10.05□□□□□ -0.8
CHD9-212ENST00000564641 MTMR14Q8NCE2 650 aa10.05□□□□□ -0.8
CHD9-212ENST00000564641 NR1H3Q13133 447 aa10.04□□□□□ -0.8
CHD9-212ENST00000564641 RNF20Q5VTR2 975 aa10.04□□□□□ -0.8
CHD9-212ENST00000564641 PCDHB9Q9Y5E1 797 aa10.04□□□□□ -0.8
CHD9-212ENST00000564641 ERVH48-1M5A8F1 160 aa10.03□□□□□ -0.8
CHD9-212ENST00000564641 ZNF784Q8NCA9 323 aaPredicted RBP10.03□□□□□ -0.8
CHD9-212ENST00000564641 DNMT3LQ9UJW3 386 aa10.03□□□□□ -0.8
CHD9-212ENST00000564641 SOBPA7XYQ1 873 aa10.02□□□□□ -0.81
CHD9-212ENST00000564641 RAB15P59190 212 aa10.02□□□□□ -0.81
CHD9-212ENST00000564641 TMPRSS4Q9NRS4 437 aa10.01□□□□□ -0.81
CHD9-212ENST00000564641 ADH1AP07327 375 aa10□□□□□ -0.81
CHD9-212ENST00000564641 VSIG8P0DPA2 414 aa10□□□□□ -0.81
CHD9-212ENST00000564641 VEGFBP49765 207 aa10□□□□□ -0.81
CHD9-212ENST00000564641 LCE2CQ5TA81 110 aa10□□□□□ -0.81
CHD9-212ENST00000564641 SNRKQ9NRH2 765 aa10□□□□□ -0.81
CHD9-212ENST00000564641 STK17AQ9UEE5 414 aa10□□□□□ -0.81
CHD9-212ENST00000564641 LILRA1O75019 489 aa9.99□□□□□ -0.81
CHD9-212ENST00000564641 RELBQ01201 579 aa9.99□□□□□ -0.81
CHD9-212ENST00000564641 GIGYF1O75420 1035 aaPredicted RBP9.98□□□□□ -0.81
CHD9-212ENST00000564641 AGBL1Q96MI9 1066 aa9.98□□□□□ -0.81
CHD9-212ENST00000564641 PPFIA3O75145 1194 aa9.97□□□□□ -0.81
CHD9-212ENST00000564641 GMPRP36959 345 aa9.97□□□□□ -0.81
CHD9-212ENST00000564641 PTGIRP43119 386 aa9.96□□□□□ -0.82
CHD9-212ENST00000564641 POLMQ9NP87 494 aaPredicted RBP9.96□□□□□ -0.82
CHD9-212ENST00000564641 ERBB4Q15303 1308 aa9.96□□□□□ -0.82
CHD9-212ENST00000564641 FAM181BA6NEQ2 426 aa9.95□□□□□ -0.82
CHD9-212ENST00000564641 GPR37L1O60883 481 aa9.95□□□□□ -0.82
CHD9-212ENST00000564641 ADD1P35611 737 aaKnown RBP9.95□□□□□ -0.82
CHD9-212ENST00000564641 PTSQ03393 145 aa9.95□□□□□ -0.82
CHD9-212ENST00000564641 INSM2Q96T92 566 aaPredicted RBP9.95□□□□□ -0.82
CHD9-212ENST00000564641 ZNF395Q9H8N7 513 aaPredicted RBP9.95□□□□□ -0.82
CHD9-212ENST00000564641 CYLDQ9NQC7 956 aa9.95□□□□□ -0.82
CHD9-212ENST00000564641 FIGNL2A6NMB9 653 aa9.94□□□□□ -0.82
CHD9-212ENST00000564641 CTSOP43234 321 aaPredicted RBP9.94□□□□□ -0.82
CHD9-212ENST00000564641 ATP5J2-PTCD1G3V325 749 aa9.93□□□□□ -0.82
CHD9-212ENST00000564641 ERVK-9P63128 1117 aa9.93□□□□□ -0.82
CHD9-212ENST00000564641 CC2D2BQ6DHV5 1058 aa9.93□□□□□ -0.82
CHD9-212ENST00000564641 ESF1Q9H501 851 aaKnown RBP9.93□□□□□ -0.82
CHD9-212ENST00000564641 EIF4G2P78344 907 aaKnown RBP eCLIP9.92□□□□□ -0.82
CHD9-212ENST00000564641 RNF217Q8TC41 542 aa9.92□□□□□ -0.82
CHD9-212ENST00000564641 PRKCSHP14314 528 aaPredicted RBP9.91□□□□□ -0.82
CHD9-212ENST00000564641 CCDC155Q8N6L0 562 aa9.91□□□□□ -0.82
CHD9-212ENST00000564641 KDF1Q8NAX2 398 aaPredicted RBP9.91□□□□□ -0.82
CHD9-212ENST00000564641 SLC35F4A4IF30 521 aa9.9□□□□□ -0.82
CHD9-212ENST00000564641 GPC1P35052 558 aa9.9□□□□□ -0.82
CHD9-212ENST00000564641 CYP2U1Q7Z449 544 aa9.9□□□□□ -0.82
CHD9-212ENST00000564641 ZSCAN1Q8NBB4 408 aa9.9□□□□□ -0.82
CHD9-212ENST00000564641 NANOS1Q8WY41 292 aaKnown RBP9.9□□□□□ -0.82
CHD9-212ENST00000564641 TBC1D2BQ9UPU7 963 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms