RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 GJA5P36382 358 aa7.47□□□□□ -1.21
CHD9-211ENST00000564600 RASSF7Q02833 373 aa7.47□□□□□ -1.21
CHD9-211ENST00000564600 PPP1R26Q5T8A7 1209 aaPredicted RBP7.47□□□□□ -1.21
CHD9-211ENST00000564600 CDC14CA4D256 554 aa7.46□□□□□ -1.22
CHD9-211ENST00000564600 LILRB3O75022 631 aa7.46□□□□□ -1.22
CHD9-211ENST00000564600 GDF11O95390 407 aa7.46□□□□□ -1.22
CHD9-211ENST00000564600 ERFEQ4G0M1 354 aa7.46□□□□□ -1.22
CHD9-211ENST00000564600 TPRNQ4KMQ1 711 aa7.46□□□□□ -1.22
CHD9-211ENST00000564600 PRPF38BQ5VTL8 546 aaKnown RBP7.46□□□□□ -1.22
CHD9-211ENST00000564600 ZNF385CQ66K41 422 aaPredicted RBP7.46□□□□□ -1.22
CHD9-211ENST00000564600 CCDC155Q8N6L0 562 aa7.46□□□□□ -1.22
CHD9-211ENST00000564600 TSEN34Q9BSV6 310 aaKnown RBP7.46□□□□□ -1.22
CHD9-211ENST00000564600 POLR3EQ9NVU0 708 aa7.46□□□□□ -1.22
CHD9-211ENST00000564600 CTSOP43234 321 aaPredicted RBP7.45□□□□□ -1.22
CHD9-211ENST00000564600 DIXDC1Q155Q3 683 aa7.45□□□□□ -1.22
CHD9-211ENST00000564600 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.45□□□□□ -1.22
CHD9-211ENST00000564600 FBXO31Q5XUX0 539 aaPredicted RBP7.45□□□□□ -1.22
CHD9-211ENST00000564600 VWA5B2Q8N398 1253 aa7.45□□□□□ -1.22
CHD9-211ENST00000564600 KDM4CQ9H3R0 1056 aa7.45□□□□□ -1.22
CHD9-211ENST00000564600 RELBQ01201 579 aa7.44□□□□□ -1.22
CHD9-211ENST00000564600 CTDSPL2Q05D32 466 aa7.44□□□□□ -1.22
CHD9-211ENST00000564600 TMEM151AQ8N4L1 468 aa7.44□□□□□ -1.22
CHD9-211ENST00000564600 SVOPQ8N4V2 548 aa7.44□□□□□ -1.22
CHD9-211ENST00000564600 LRRN4Q8WUT4 740 aa7.44□□□□□ -1.22
CHD9-211ENST00000564600 FAM117AQ9C073 453 aa7.44□□□□□ -1.22
CHD9-211ENST00000564600 EMILIN1Q9Y6C2 1016 aa7.44□□□□□ -1.22
CHD9-211ENST00000564600 RAB15P59190 212 aa7.43□□□□□ -1.22
CHD9-211ENST00000564600 NBPF14Q5TI25 921 aa7.43□□□□□ -1.22
CHD9-211ENST00000564600 INSM2Q96T92 566 aaPredicted RBP7.43□□□□□ -1.22
CHD9-211ENST00000564600 ZNF395Q9H8N7 513 aaPredicted RBP7.43□□□□□ -1.22
CHD9-211ENST00000564600 MAP4K5Q9Y4K4 846 aa7.43□□□□□ -1.22
CHD9-211ENST00000564600 PRKCSHP14314 528 aaPredicted RBP7.42□□□□□ -1.22
CHD9-211ENST00000564600 IRS1P35568 1242 aa7.42□□□□□ -1.22
CHD9-211ENST00000564600 TRMT44Q8IYL2 757 aaKnown RBP7.42□□□□□ -1.22
CHD9-211ENST00000564600 SPINT1O43278 529 aa7.41□□□□□ -1.22
CHD9-211ENST00000564600 GPAT2Q6NUI2 795 aa7.41□□□□□ -1.22
CHD9-211ENST00000564600 HELBQ8NG08 1087 aaPredicted RBP7.41□□□□□ -1.22
CHD9-211ENST00000564600 TMPRSS4Q9NRS4 437 aa7.41□□□□□ -1.22
CHD9-211ENST00000564600 SLC35F4A4IF30 521 aa7.4□□□□□ -1.22
CHD9-211ENST00000564600 CLK2P49760 499 aaKnown RBP7.4□□□□□ -1.22
CHD9-211ENST00000564600 Q6ZVU0 165 aa7.4□□□□□ -1.22
CHD9-211ENST00000564600 ARMC2Q8NEN0 867 aa7.4□□□□□ -1.22
CHD9-211ENST00000564600 KCTD15Q96SI1 283 aaPredicted RBP7.4□□□□□ -1.22
CHD9-211ENST00000564600 ARHGAP9Q9BRR9 750 aa7.4□□□□□ -1.22
CHD9-211ENST00000564600 POLMQ9NP87 494 aaPredicted RBP7.4□□□□□ -1.22
CHD9-211ENST00000564600 ITGA6P23229 1130 aa7.39□□□□□ -1.23
CHD9-211ENST00000564600 NR6A1Q15406 480 aa7.39□□□□□ -1.23
CHD9-211ENST00000564600 INTS6LQ5JSJ4 861 aaKnown RBP7.39□□□□□ -1.23
CHD9-211ENST00000564600 OCSTAMPQ9BR26 566 aa7.39□□□□□ -1.23
CHD9-211ENST00000564600 CUEDC1Q9NWM3 386 aaPredicted RBP7.39□□□□□ -1.23
CHD9-211ENST00000564600 PGPEP1Q9NXJ5 209 aa7.39□□□□□ -1.23
CHD9-211ENST00000564600 SENP3-EIF4A1A0A087X0R7 540 aa7.37□□□□□ -1.23
CHD9-211ENST00000564600 BRPF1P55201 1214 aaPredicted RBP7.37□□□□□ -1.23
CHD9-211ENST00000564600 LYPD4Q6UWN0 246 aa7.37□□□□□ -1.23
CHD9-211ENST00000564600 EPS8L1Q8TE68 723 aa7.37□□□□□ -1.23
CHD9-211ENST00000564600 NANOS1Q8WY41 292 aaKnown RBP7.37□□□□□ -1.23
CHD9-211ENST00000564600 SLC10A4Q96EP9 437 aa7.37□□□□□ -1.23
CHD9-211ENST00000564600 ARHGEF15O94989 841 aa7.36□□□□□ -1.23
CHD9-211ENST00000564600 NEUROD2Q15784 382 aa7.36□□□□□ -1.23
CHD9-211ENST00000564600 ZBTB33Q86T24 672 aa7.36□□□□□ -1.23
CHD9-211ENST00000564600 PROCA1Q8NCQ7 364 aaPredicted RBP7.36□□□□□ -1.23
CHD9-211ENST00000564600 RNF217Q8TC41 542 aa7.36□□□□□ -1.23
CHD9-211ENST00000564600 RHOQP17081 205 aa7.35□□□□□ -1.23
CHD9-211ENST00000564600 ADD1P35611 737 aaKnown RBP7.35□□□□□ -1.23
CHD9-211ENST00000564600 FOXD4L5Q5VV16 416 aaPredicted RBP7.35□□□□□ -1.23
CHD9-211ENST00000564600 SV2AQ7L0J3 742 aa7.35□□□□□ -1.23
CHD9-211ENST00000564600 ZNF784Q8NCA9 323 aaPredicted RBP7.35□□□□□ -1.23
CHD9-211ENST00000564600 FKBPLQ9UIM3 349 aa7.35□□□□□ -1.23
CHD9-211ENST00000564600 ADAMTS2O95450 1211 aa7.34□□□□□ -1.23
CHD9-211ENST00000564600 GPR25O00155 361 aa7.33□□□□□ -1.24
CHD9-211ENST00000564600 SLURP2P0DP57 97 aa7.33□□□□□ -1.24
CHD9-211ENST00000564600 MARSP56192 900 aaKnown RBP7.33□□□□□ -1.24
CHD9-211ENST00000564600 GAS6Q14393 721 aa7.33□□□□□ -1.24
CHD9-211ENST00000564600 TUSC1Q2TAM9 212 aa7.33□□□□□ -1.24
CHD9-211ENST00000564600 PDXDC2PQ6P474 469 aa7.33□□□□□ -1.24
CHD9-211ENST00000564600 KDF1Q8NAX2 398 aaPredicted RBP7.33□□□□□ -1.24
CHD9-211ENST00000564600 ADAM32Q8TC27 787 aa7.33□□□□□ -1.24
CHD9-211ENST00000564600 RNF225M0QZC1 329 aaPredicted RBP7.32□□□□□ -1.24
CHD9-211ENST00000564600 IL27Q8NEV9 243 aa7.32□□□□□ -1.24
CHD9-211ENST00000564600 DDRGK1Q96HY6 314 aa7.32□□□□□ -1.24
CHD9-211ENST00000564600 ATP1B4Q9UN42 357 aaPredicted RBP7.32□□□□□ -1.24
CHD9-211ENST00000564600 SKIV2LQ15477 1246 aaKnown RBP7.31□□□□□ -1.24
CHD9-211ENST00000564600 SH3D19Q5HYK7 790 aa7.31□□□□□ -1.24
CHD9-211ENST00000564600 PRICKLE2Q7Z3G6 844 aa7.31□□□□□ -1.24
CHD9-211ENST00000564600 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.31□□□□□ -1.24
CHD9-211ENST00000564600 RSPH6AQ9H0K4 717 aa7.31□□□□□ -1.24
CHD9-211ENST00000564600 HMX1Q9NP08 348 aaPredicted RBP7.31□□□□□ -1.24
CHD9-211ENST00000564600 ERVH48-1M5A8F1 160 aa7.3□□□□□ -1.24
CHD9-211ENST00000564600 LILRA1O75019 489 aa7.3□□□□□ -1.24
CHD9-211ENST00000564600 AP1G2O75843 785 aa7.3□□□□□ -1.24
CHD9-211ENST00000564600 GPKOWQ92917 476 aaPredicted RBP eCLIP7.3□□□□□ -1.24
CHD9-211ENST00000564600 CYLDQ9NQC7 956 aa7.3□□□□□ -1.24
CHD9-211ENST00000564600 ADH1AP07327 375 aa7.29□□□□□ -1.24
CHD9-211ENST00000564600 CELA2BP08218 269 aaPredicted RBP7.29□□□□□ -1.24
CHD9-211ENST00000564600 DHX9Q08211 1270 aaKnown RBP7.29□□□□□ -1.24
CHD9-211ENST00000564600 DNMT3AQ9Y6K1 912 aaPredicted RBP7.29□□□□□ -1.24
CHD9-211ENST00000564600 CNTNAP5Q8WYK1 1306 aa7.28□□□□□ -1.24
CHD9-211ENST00000564600 PTGIRP43119 386 aa7.27□□□□□ -1.25
CHD9-211ENST00000564600 PTK2Q05397 1052 aa7.26□□□□□ -1.25
CHD9-211ENST00000564600 LYSMD3Q7Z3D4 306 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms