RNA–Protein interactions for RNA: ENST00000564531.1

AC025259.3-201, humanhuman

TSL 3 BASIC

Gene AC025259.3, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025259.3-201ENST00000564531 IP6K1Q92551 441 aa23.57■■□□□ 1.36
AC025259.3-201ENST00000564531 DDX17Q92841 729 aaKnown RBP23.57■■□□□ 1.36
AC025259.3-201ENST00000564531 APAF1O14727 1248 aa23.56■■□□□ 1.36
AC025259.3-201ENST00000564531 HSP90AB2PQ58FF8 381 aa23.56■■□□□ 1.36
AC025259.3-201ENST00000564531 ARHGEF25Q86VW2 580 aa23.56■■□□□ 1.36
AC025259.3-201ENST00000564531 ROBO1Q9Y6N7 1651 aa23.56■■□□□ 1.36
AC025259.3-201ENST00000564531 LTN1O94822 1766 aa23.55■■□□□ 1.36
AC025259.3-201ENST00000564531 CCDC27Q2M243 656 aa23.53■■□□□ 1.36
AC025259.3-201ENST00000564531 TCP11L2Q8N4U5 519 aa23.53■■□□□ 1.36
AC025259.3-201ENST00000564531 PLEKHF1Q96S99 279 aa23.53■■□□□ 1.36
AC025259.3-201ENST00000564531 RSPH6AQ9H0K4 717 aa23.53■■□□□ 1.36
AC025259.3-201ENST00000564531 RGPD1P0DJD0 1748 aa23.53■■□□□ 1.36
AC025259.3-201ENST00000564531 CPDO75976 1380 aa23.52■■□□□ 1.36
AC025259.3-201ENST00000564531 CRYBG1Q9Y4K1 1723 aa23.51■■□□□ 1.35
AC025259.3-201ENST00000564531 LRRC59Q96AG4 307 aaKnown RBP23.51■■□□□ 1.35
AC025259.3-201ENST00000564531 PRKAR2BP31323 418 aa23.5■■□□□ 1.35
AC025259.3-201ENST00000564531 IGSF1Q8N6C5 1336 aa23.5■■□□□ 1.35
AC025259.3-201ENST00000564531 ZNF521Q96K83 1311 aa23.5■■□□□ 1.35
AC025259.3-201ENST00000564531 KDRP35968 1356 aa23.48■■□□□ 1.35
AC025259.3-201ENST00000564531 GOLGA2Q08379 1002 aa23.47■■□□□ 1.35
AC025259.3-201ENST00000564531 SALL2Q9Y467 1007 aaPredicted RBP23.47■■□□□ 1.35
AC025259.3-201ENST00000564531 HMOX1P09601 288 aa23.46■■□□□ 1.35
AC025259.3-201ENST00000564531 SULT6B1Q6IMI4 303 aa23.46■■□□□ 1.35
AC025259.3-201ENST00000564531 PHF23Q9BUL5 403 aaPredicted RBP23.46■■□□□ 1.35
AC025259.3-201ENST00000564531 TMPOP42166 694 aaKnown RBP23.45■■□□□ 1.34
AC025259.3-201ENST00000564531 HAP1P54257 671 aaPredicted RBP23.45■■□□□ 1.34
AC025259.3-201ENST00000564531 ZBTB7CA1YPR0 619 aa23.44■■□□□ 1.34
AC025259.3-201ENST00000564531 LMOD3Q0VAK6 560 aa23.44■■□□□ 1.34
AC025259.3-201ENST00000564531 WDR63Q8IWG1 891 aa23.44■■□□□ 1.34
AC025259.3-201ENST00000564531 NFE2L2Q16236 605 aa23.43■■□□□ 1.34
AC025259.3-201ENST00000564531 WWC1Q8IX03 1113 aa23.43■■□□□ 1.34
AC025259.3-201ENST00000564531 EYA1Q99502 592 aa23.43■■□□□ 1.34
AC025259.3-201ENST00000564531 COL22A1Q8NFW1 1626 aaPredicted RBP23.42■■□□□ 1.34
AC025259.3-201ENST00000564531 E9PSI1 815 aa23.42■■□□□ 1.34
AC025259.3-201ENST00000564531 UBAP1LF5GYI3 381 aa23.42■■□□□ 1.34
AC025259.3-201ENST00000564531 ZC3H6P61129 1189 aaKnown RBP23.42■■□□□ 1.34
AC025259.3-201ENST00000564531 ABCA3Q99758 1704 aa23.42■■□□□ 1.34
AC025259.3-201ENST00000564531 CERKQ8TCT0 537 aa23.41■■□□□ 1.34
AC025259.3-201ENST00000564531 PHLPP1O60346 1717 aa23.4■■□□□ 1.34
AC025259.3-201ENST00000564531 CALD1Q05682 793 aaKnown RBP23.4■■□□□ 1.34
AC025259.3-201ENST00000564531 CABLES1Q8TDN4 633 aa23.4■■□□□ 1.34
AC025259.3-201ENST00000564531 ANKRD24Q8TF21 1146 aa23.4■■□□□ 1.34
AC025259.3-201ENST00000564531 KIAA0232Q92628 1395 aa23.4■■□□□ 1.34
AC025259.3-201ENST00000564531 FAM208AQ9UK61 1670 aaKnown RBP23.39■■□□□ 1.34
AC025259.3-201ENST00000564531 SENP3-EIF4A1A0A087X0R7 540 aa23.39■■□□□ 1.33
AC025259.3-201ENST00000564531 PLEKHG5O94827 1062 aa23.39■■□□□ 1.33
AC025259.3-201ENST00000564531 RIPK4P57078 832 aa23.39■■□□□ 1.33
AC025259.3-201ENST00000564531 LTV1Q96GA3 475 aaPredicted RBP23.39■■□□□ 1.33
AC025259.3-201ENST00000564531 NCAPD2Q15021 1401 aa23.39■■□□□ 1.33
AC025259.3-201ENST00000564531 PLEKHG2Q9H7P9 1386 aa23.39■■□□□ 1.33
AC025259.3-201ENST00000564531 IL16Q14005 1332 aa23.38■■□□□ 1.33
AC025259.3-201ENST00000564531 COL16A1Q07092 1604 aaPredicted RBP23.38■■□□□ 1.33
AC025259.3-201ENST00000564531 NEUROD2Q15784 382 aa23.38■■□□□ 1.33
AC025259.3-201ENST00000564531 AEBP1Q8IUX7 1158 aa23.38■■□□□ 1.33
AC025259.3-201ENST00000564531 PRDM11Q9NQV5 511 aa23.38■■□□□ 1.33
AC025259.3-201ENST00000564531 RRP7AQ9Y3A4 280 aaKnown RBP23.38■■□□□ 1.33
AC025259.3-201ENST00000564531 CAMTA1Q9Y6Y1 1673 aa23.38■■□□□ 1.33
AC025259.3-201ENST00000564531 ERBB3P21860 1342 aa23.37■■□□□ 1.33
AC025259.3-201ENST00000564531 SLFN5Q08AF3 891 aa23.37■■□□□ 1.33
AC025259.3-201ENST00000564531 COL18A1P39060 1754 aa23.37■■□□□ 1.33
AC025259.3-201ENST00000564531 GAS2L2Q8NHY3 880 aa23.36■■□□□ 1.33
AC025259.3-201ENST00000564531 PIP4K2BP78356 416 aa23.35■■□□□ 1.33
AC025259.3-201ENST00000564531 PHACTR3Q96KR7 559 aa23.35■■□□□ 1.33
AC025259.3-201ENST00000564531 MYH16Q9H6N6 1097 aa23.34■■□□□ 1.33
AC025259.3-201ENST00000564531 TRMT2AQ8IZ69 625 aaKnown RBP23.33■■□□□ 1.33
AC025259.3-201ENST00000564531 CDCA7LQ96GN5 454 aa23.33■■□□□ 1.33
AC025259.3-201ENST00000564531 TRIM35Q9UPQ4 493 aa23.33■■□□□ 1.33
AC025259.3-201ENST00000564531 AXIN2Q9Y2T1 843 aa23.33■■□□□ 1.33
AC025259.3-201ENST00000564531 LMO7Q8WWI1 1683 aa23.32■■□□□ 1.32
AC025259.3-201ENST00000564531 NBPF6Q5VWK0 638 aa23.32■■□□□ 1.32
AC025259.3-201ENST00000564531 NBPF4Q96M43 638 aa23.32■■□□□ 1.32
AC025259.3-201ENST00000564531 DUSP27Q5VZP5 1158 aa23.31■■□□□ 1.32
AC025259.3-201ENST00000564531 HTATSF1O43719 755 aaKnown RBP23.3■■□□□ 1.32
AC025259.3-201ENST00000564531 NEFLP07196 543 aa23.3■■□□□ 1.32
AC025259.3-201ENST00000564531 CSB-PGBD3P0DP91 1061 aa23.3■■□□□ 1.32
AC025259.3-201ENST00000564531 CHRNA2Q15822 529 aa23.28■■□□□ 1.32
AC025259.3-201ENST00000564531 AMOTQ4VCS5 1084 aa23.28■■□□□ 1.32
AC025259.3-201ENST00000564531 COL14A1Q05707 1796 aaKnown RBP23.27■■□□□ 1.32
AC025259.3-201ENST00000564531 NLRP2Q9NX02 1062 aa23.27■■□□□ 1.32
AC025259.3-201ENST00000564531 WDR17Q8IZU2 1322 aa23.27■■□□□ 1.32
AC025259.3-201ENST00000564531 COL5A2P05997 1499 aaPredicted RBP23.26■■□□□ 1.31
AC025259.3-201ENST00000564531 PLEKHO1Q53GL0 409 aaPredicted RBP23.26■■□□□ 1.31
AC025259.3-201ENST00000564531 RTF1Q92541 710 aaKnown RBP23.26■■□□□ 1.31
AC025259.3-201ENST00000564531 RGPD5Q99666 1765 aa23.25■■□□□ 1.31
AC025259.3-201ENST00000564531 MTHFSDQ2M296 383 aaKnown RBP23.25■■□□□ 1.31
AC025259.3-201ENST00000564531 USHBP1Q8N6Y0 703 aa23.25■■□□□ 1.31
AC025259.3-201ENST00000564531 RCAN3Q9UKA8 241 aa23.25■■□□□ 1.31
AC025259.3-201ENST00000564531 JCADQ9P266 1359 aa23.25■■□□□ 1.31
AC025259.3-201ENST00000564531 CT47B1P0C2W7 299 aaPredicted RBP23.24■■□□□ 1.31
AC025259.3-201ENST00000564531 GNAI1P63096 354 aa23.24■■□□□ 1.31
AC025259.3-201ENST00000564531 RAPGEF4Q8WZA2 1011 aa23.24■■□□□ 1.31
AC025259.3-201ENST00000564531 IFT57Q9NWB7 429 aa23.23■■□□□ 1.31
AC025259.3-201ENST00000564531 MAP3K5Q99683 1374 aa23.23■■□□□ 1.31
AC025259.3-201ENST00000564531 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.22■■□□□ 1.31
AC025259.3-201ENST00000564531 SUPT16HQ9Y5B9 1047 aaKnown RBP23.22■■□□□ 1.31
AC025259.3-201ENST00000564531 GNAT3A8MTJ3 354 aa23.21■■□□□ 1.31
AC025259.3-201ENST00000564531 TATP17735 454 aaPredicted RBP23.21■■□□□ 1.31
AC025259.3-201ENST00000564531 SPINK5Q9NQ38 1064 aaPredicted RBP23.21■■□□□ 1.31
AC025259.3-201ENST00000564531 DLG5Q8TDM6 1919 aa23.2■■□□□ 1.3
AC025259.3-201ENST00000564531 RGPD2P0DJD1 1756 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms