RNA–Protein interactions for RNA: ENST00000564476.1

SPNS1-206, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 3

Gene SPNS1, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-206ENST00000564476 PPM1GO15355 546 aaPredicted RBP25.21■■□□□ 1.63
SPNS1-206ENST00000564476 PLEKHG5O94827 1062 aa25.2■■□□□ 1.62
SPNS1-206ENST00000564476 ZC3H6P61129 1189 aaKnown RBP25.2■■□□□ 1.62
SPNS1-206ENST00000564476 CCDC184Q52MB2 194 aa25.2■■□□□ 1.62
SPNS1-206ENST00000564476 CDK12Q9NYV4 1490 aaPredicted RBP25.19■■□□□ 1.62
SPNS1-206ENST00000564476 HOXC9P31274 260 aa25.18■■□□□ 1.62
SPNS1-206ENST00000564476 PEAK1Q9H792 1746 aa25.17■■□□□ 1.62
SPNS1-206ENST00000564476 NUDCQ9Y266 331 aa25.17■■□□□ 1.62
SPNS1-206ENST00000564476 DIAPH1O60610 1272 aaKnown RBP25.16■■□□□ 1.62
SPNS1-206ENST00000564476 PRDM11Q9NQV5 511 aa25.16■■□□□ 1.62
SPNS1-206ENST00000564476 ABCC6O95255 1503 aa25.16■■□□□ 1.62
SPNS1-206ENST00000564476 KIAA0232Q92628 1395 aa25.16■■□□□ 1.62
SPNS1-206ENST00000564476 ZNF772Q68DY9 489 aaPredicted RBP25.15■■□□□ 1.62
SPNS1-206ENST00000564476 BLMP54132 1417 aaPredicted RBP25.14■■□□□ 1.62
SPNS1-206ENST00000564476 HSP90AB2PQ58FF8 381 aa25.14■■□□□ 1.62
SPNS1-206ENST00000564476 PNISRQ8TF01 805 aaKnown RBP25.14■■□□□ 1.62
SPNS1-206ENST00000564476 COL3A1P02461 1466 aaPredicted RBP25.14■■□□□ 1.61
SPNS1-206ENST00000564476 COL18A1P39060 1754 aa25.13■■□□□ 1.61
SPNS1-206ENST00000564476 AFF2P51816 1311 aa25.12■■□□□ 1.61
SPNS1-206ENST00000564476 ZBTB7CA1YPR0 619 aa25.11■■□□□ 1.61
SPNS1-206ENST00000564476 FAM83GA6ND36 823 aa25.1■■□□□ 1.61
SPNS1-206ENST00000564476 IL13P35225 146 aa25.1■■□□□ 1.61
SPNS1-206ENST00000564476 WDR43Q15061 677 aaKnown RBP eCLIP25.1■■□□□ 1.61
SPNS1-206ENST00000564476 EIF4A2Q14240 407 aaKnown RBP25.09■■□□□ 1.61
SPNS1-206ENST00000564476 CHRNA2Q15822 529 aa25.08■■□□□ 1.61
SPNS1-206ENST00000564476 C8orf37Q96NL8 207 aa25.08■■□□□ 1.61
SPNS1-206ENST00000564476 AXIN2Q9Y2T1 843 aa25.08■■□□□ 1.61
SPNS1-206ENST00000564476 RGPD5Q99666 1765 aa25.08■■□□□ 1.6
SPNS1-206ENST00000564476 ADAMTS2O95450 1211 aa25.06■■□□□ 1.6
SPNS1-206ENST00000564476 ANKRD24Q8TF21 1146 aa25.05■■□□□ 1.6
SPNS1-206ENST00000564476 PNNQ9H307 717 aaKnown RBP25.05■■□□□ 1.6
SPNS1-206ENST00000564476 LMO7Q8WWI1 1683 aa25.04■■□□□ 1.6
SPNS1-206ENST00000564476 COL14A1Q05707 1796 aaKnown RBP25.03■■□□□ 1.6
SPNS1-206ENST00000564476 U2SURPO15042 1029 aaKnown RBP25.03■■□□□ 1.6
SPNS1-206ENST00000564476 ERBB3P21860 1342 aa25.03■■□□□ 1.6
SPNS1-206ENST00000564476 U2AF1L5P0DN76 240 aaPredicted RBP25.02■■□□□ 1.6
SPNS1-206ENST00000564476 U2AF1Q01081 240 aaKnown RBP eCLIP25.02■■□□□ 1.6
SPNS1-206ENST00000564476 FCHSD2O94868 740 aa25.01■■□□□ 1.59
SPNS1-206ENST00000564476 RXRBP28702 533 aa25.01■■□□□ 1.59
SPNS1-206ENST00000564476 EVA1CP58658 441 aa25.01■■□□□ 1.59
SPNS1-206ENST00000564476 FAM9BQ8IZU0 186 aa25.01■■□□□ 1.59
SPNS1-206ENST00000564476 BTG4Q9NY30 223 aa25.01■■□□□ 1.59
SPNS1-206ENST00000564476 ADAMTS8Q9UP79 889 aa25.01■■□□□ 1.59
SPNS1-206ENST00000564476 RGPD1P0DJD0 1748 aa25■■□□□ 1.59
SPNS1-206ENST00000564476 LTV1Q96GA3 475 aaPredicted RBP25■■□□□ 1.59
SPNS1-206ENST00000564476 EYA1Q99502 592 aa25■■□□□ 1.59
SPNS1-206ENST00000564476 CSB-PGBD3P0DP91 1061 aa24.99■■□□□ 1.59
SPNS1-206ENST00000564476 WDR17Q8IZU2 1322 aa24.99■■□□□ 1.59
SPNS1-206ENST00000564476 FNBP4Q8N3X1 1017 aaPredicted RBP24.99■■□□□ 1.59
SPNS1-206ENST00000564476 NGLY1Q96IV0 654 aa24.99■■□□□ 1.59
SPNS1-206ENST00000564476 CAMTA1Q9Y6Y1 1673 aa24.99■■□□□ 1.59
SPNS1-206ENST00000564476 IGSF1Q8N6C5 1336 aa24.98■■□□□ 1.59
SPNS1-206ENST00000564476 FAM208AQ9UK61 1670 aaKnown RBP24.97■■□□□ 1.59
SPNS1-206ENST00000564476 COL5A2P05997 1499 aaPredicted RBP24.96■■□□□ 1.59
SPNS1-206ENST00000564476 RGS12O14924 1447 aa24.95■■□□□ 1.59
SPNS1-206ENST00000564476 NBPF6Q5VWK0 638 aa24.95■■□□□ 1.58
SPNS1-206ENST00000564476 NBPF4Q96M43 638 aa24.95■■□□□ 1.58
SPNS1-206ENST00000564476 QTRT2Q9H974 415 aaKnown RBP24.95■■□□□ 1.58
SPNS1-206ENST00000564476 SLIT2O94813 1529 aa24.95■■□□□ 1.58
SPNS1-206ENST00000564476 RGPD2P0DJD1 1756 aa24.95■■□□□ 1.58
SPNS1-206ENST00000564476 SULT6B1Q6IMI4 303 aa24.94■■□□□ 1.58
SPNS1-206ENST00000564476 CARD10Q9BWT7 1032 aa24.94■■□□□ 1.58
SPNS1-206ENST00000564476 NLRP2Q9NX02 1062 aa24.94■■□□□ 1.58
SPNS1-206ENST00000564476 NWD2Q9ULI1 1742 aa24.94■■□□□ 1.58
SPNS1-206ENST00000564476 PLCH1Q4KWH8 1693 aa24.94■■□□□ 1.58
SPNS1-206ENST00000564476 KDRP35968 1356 aa24.93■■□□□ 1.58
SPNS1-206ENST00000564476 TOM1L2Q6ZVM7 507 aa24.93■■□□□ 1.58
SPNS1-206ENST00000564476 STRN4Q9NRL3 753 aa24.93■■□□□ 1.58
SPNS1-206ENST00000564476 NEFMP07197 916 aa24.92■■□□□ 1.58
SPNS1-206ENST00000564476 RBM6P78332 1123 aaKnown RBP24.92■■□□□ 1.58
SPNS1-206ENST00000564476 UNC5CLQ8IV45 518 aa24.92■■□□□ 1.58
SPNS1-206ENST00000564476 USP21Q9UK80 565 aa24.92■■□□□ 1.58
SPNS1-206ENST00000564476 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.92■■□□□ 1.58
SPNS1-206ENST00000564476 RUNDC1Q96C34 613 aa24.91■■□□□ 1.58
SPNS1-206ENST00000564476 RSPH6AQ9H0K4 717 aa24.91■■□□□ 1.58
SPNS1-206ENST00000564476 ATRNO75882 1429 aa24.91■■□□□ 1.58
SPNS1-206ENST00000564476 NCAPD2Q15021 1401 aa24.91■■□□□ 1.58
SPNS1-206ENST00000564476 CRB1P82279 1406 aa24.89■■□□□ 1.58
SPNS1-206ENST00000564476 HMOX1P09601 288 aa24.89■■□□□ 1.58
SPNS1-206ENST00000564476 LARP1Q6PKG0 1096 aaKnown RBP24.89■■□□□ 1.58
SPNS1-206ENST00000564476 PLEKHG2Q9H7P9 1386 aa24.89■■□□□ 1.57
SPNS1-206ENST00000564476 BCL9LQ86UU0 1499 aa24.89■■□□□ 1.57
SPNS1-206ENST00000564476 NGEFQ8N5V2 710 aa24.88■■□□□ 1.57
SPNS1-206ENST00000564476 PLEKHF1Q96S99 279 aa24.88■■□□□ 1.57
SPNS1-206ENST00000564476 NRAPQ86VF7 1730 aa24.88■■□□□ 1.57
SPNS1-206ENST00000564476 PRKAR2BP31323 418 aa24.87■■□□□ 1.57
SPNS1-206ENST00000564476 TRPC5Q9UL62 973 aaPredicted RBP24.87■■□□□ 1.57
SPNS1-206ENST00000564476 THRAP3Q9Y2W1 955 aaKnown RBP24.87■■□□□ 1.57
SPNS1-206ENST00000564476 VPS72Q15906 364 aa24.86■■□□□ 1.57
SPNS1-206ENST00000564476 NCBP3Q53F19 620 aaKnown RBP24.86■■□□□ 1.57
SPNS1-206ENST00000564476 AEBP1Q8IUX7 1158 aa24.86■■□□□ 1.57
SPNS1-206ENST00000564476 MAPK8IP3Q9UPT6 1336 aa24.86■■□□□ 1.57
SPNS1-206ENST00000564476 RAPGEF4Q8WZA2 1011 aa24.85■■□□□ 1.57
SPNS1-206ENST00000564476 USHBP1Q8N6Y0 703 aa24.84■■□□□ 1.57
SPNS1-206ENST00000564476 UPF1Q92900 1129 aaKnown RBP eCLIP24.84■■□□□ 1.57
SPNS1-206ENST00000564476 CDCA7Q9BWT1 371 aaPredicted RBP24.83■■□□□ 1.57
SPNS1-206ENST00000564476 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.83■■□□□ 1.57
SPNS1-206ENST00000564476 SPATA31A5Q5VU36 1347 aa24.83■■□□□ 1.56
SPNS1-206ENST00000564476 SPATA31A7Q8IWB4 1347 aa24.83■■□□□ 1.56
SPNS1-206ENST00000564476 AMOTQ4VCS5 1084 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms