RNA–Protein interactions for RNA: ENST00000564383.1

HERC2-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 471 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-205ENST00000564383 PRAM1Q96QH2 718 aa9.34□□□□□ -0.91
HERC2-205ENST00000564383 PLEKHH1Q9ULM0 1364 aa9.34□□□□□ -0.91
HERC2-205ENST00000564383 DLC1Q96QB1 1528 aa9.33□□□□□ -0.92
HERC2-205ENST00000564383 SLC24A1O60721 1099 aa9.33□□□□□ -0.92
HERC2-205ENST00000564383 PPP1R37O75864 691 aa9.33□□□□□ -0.92
HERC2-205ENST00000564383 PLPP6Q8IY26 295 aa9.33□□□□□ -0.92
HERC2-205ENST00000564383 THEMISQ8N1K5 641 aaPredicted RBP9.33□□□□□ -0.92
HERC2-205ENST00000564383 SLC4A5Q9BY07 1137 aa9.33□□□□□ -0.92
HERC2-205ENST00000564383 ARHGEF28Q8N1W1 1705 aaKnown RBP9.33□□□□□ -0.92
HERC2-205ENST00000564383 CEP170BQ9Y4F5 1589 aaPredicted RBP9.33□□□□□ -0.92
HERC2-205ENST00000564383 TECPR2O15040 1411 aa9.32□□□□□ -0.92
HERC2-205ENST00000564383 TBC1D12O60347 775 aa9.32□□□□□ -0.92
HERC2-205ENST00000564383 SAFB2Q14151 953 aaKnown RBP eCLIP9.32□□□□□ -0.92
HERC2-205ENST00000564383 PTPRUQ92729 1446 aa9.31□□□□□ -0.92
HERC2-205ENST00000564383 BHMG1C9JSJ3 638 aaPredicted RBP9.31□□□□□ -0.92
HERC2-205ENST00000564383 CNGB1Q14028 1251 aaPredicted RBP9.31□□□□□ -0.92
HERC2-205ENST00000564383 AMER1Q5JTC6 1135 aaPredicted RBP9.31□□□□□ -0.92
HERC2-205ENST00000564383 WAPLQ7Z5K2 1190 aa9.31□□□□□ -0.92
HERC2-205ENST00000564383 PUS7Q96PZ0 661 aaKnown RBP9.31□□□□□ -0.92
HERC2-205ENST00000564383 CARD14Q9BXL6 1004 aa9.31□□□□□ -0.92
HERC2-205ENST00000564383 EID1Q9Y6B2 187 aa9.31□□□□□ -0.92
HERC2-205ENST00000564383 PARD3Q8TEW0 1356 aa9.31□□□□□ -0.92
HERC2-205ENST00000564383 MYOM1P52179 1685 aa9.31□□□□□ -0.92
HERC2-205ENST00000564383 QRICH2Q9H0J4 1663 aa9.31□□□□□ -0.92
HERC2-205ENST00000564383 ROBO2Q9HCK4 1378 aa9.3□□□□□ -0.92
HERC2-205ENST00000564383 SIRT1Q96EB6 747 aa9.3□□□□□ -0.92
HERC2-205ENST00000564383 SLC26A8Q96RN1 970 aa9.3□□□□□ -0.92
HERC2-205ENST00000564383 FAM135BQ49AJ0 1406 aa9.3□□□□□ -0.92
HERC2-205ENST00000564383 EVC2Q86UK5 1308 aa9.3□□□□□ -0.92
HERC2-205ENST00000564383 MINK1Q8N4C8 1332 aaPredicted RBP9.3□□□□□ -0.92
HERC2-205ENST00000564383 RALBP1Q15311 655 aa9.29□□□□□ -0.92
HERC2-205ENST00000564383 WNT2BQ93097 391 aa9.29□□□□□ -0.92
HERC2-205ENST00000564383 SLC12A5Q9H2X9 1139 aa9.29□□□□□ -0.92
HERC2-205ENST00000564383 POGKQ9P215 609 aa9.29□□□□□ -0.92
HERC2-205ENST00000564383 TBX22Q9Y458 520 aa9.29□□□□□ -0.92
HERC2-205ENST00000564383 KTN1Q86UP2 1357 aaKnown RBP9.28□□□□□ -0.92
HERC2-205ENST00000564383 CPS1P31327 1500 aa9.28□□□□□ -0.92
HERC2-205ENST00000564383 CC2D1BQ5T0F9 858 aaKnown RBP9.28□□□□□ -0.92
HERC2-205ENST00000564383 BCANQ96GW7 911 aa9.28□□□□□ -0.92
HERC2-205ENST00000564383 BCL2L12Q9HB09 334 aa9.28□□□□□ -0.92
HERC2-205ENST00000564383 MRS2Q9HD23 443 aa9.28□□□□□ -0.92
HERC2-205ENST00000564383 NPC1L1Q9UHC9 1359 aa9.27□□□□□ -0.93
HERC2-205ENST00000564383 ZNF142P52746 1687 aaPredicted RBP9.27□□□□□ -0.93
HERC2-205ENST00000564383 GOLGA8CPA6NN73 597 aa9.27□□□□□ -0.93
HERC2-205ENST00000564383 DSG2Q14126 1118 aa9.27□□□□□ -0.93
HERC2-205ENST00000564383 Q6ZNB5 142 aa9.27□□□□□ -0.93
HERC2-205ENST00000564383 CDK19Q9BWU1 502 aa9.27□□□□□ -0.93
HERC2-205ENST00000564383 GPHNQ9NQX3 736 aaPredicted RBP9.27□□□□□ -0.93
HERC2-205ENST00000564383 MYBBP1AQ9BQG0 1328 aaKnown RBP9.27□□□□□ -0.93
HERC2-205ENST00000564383 ZNF454Q8N9F8 522 aa9.26□□□□□ -0.93
HERC2-205ENST00000564383 KNSTRNQ9Y448 316 aa9.26□□□□□ -0.93
HERC2-205ENST00000564383 SRPK2P78362 688 aaKnown RBP9.25□□□□□ -0.93
HERC2-205ENST00000564383 ANKLE2Q86XL3 938 aa9.25□□□□□ -0.93
HERC2-205ENST00000564383 MRPL50Q8N5N7 158 aaKnown RBP9.25□□□□□ -0.93
HERC2-205ENST00000564383 TMC1Q8TDI8 760 aa9.25□□□□□ -0.93
HERC2-205ENST00000564383 ZBED2Q9BTP6 218 aa9.25□□□□□ -0.93
HERC2-205ENST00000564383 AMOTL2Q9Y2J4 779 aa9.25□□□□□ -0.93
HERC2-205ENST00000564383 CD163L1Q9NR16 1453 aa9.25□□□□□ -0.93
HERC2-205ENST00000564383 KNDC1Q76NI1 1749 aa9.25□□□□□ -0.93
HERC2-205ENST00000564383 BRD4O60885 1362 aaPredicted RBP9.24□□□□□ -0.93
HERC2-205ENST00000564383 ATAD2Q6PL18 1390 aa9.24□□□□□ -0.93
HERC2-205ENST00000564383 ANKRD36BQ8N2N9 1353 aa9.24□□□□□ -0.93
HERC2-205ENST00000564383 DIP2AQ14689 1571 aa9.24□□□□□ -0.93
HERC2-205ENST00000564383 PTCH1Q13635 1447 aa9.24□□□□□ -0.93
HERC2-205ENST00000564383 NSD3Q9BZ95 1437 aa9.24□□□□□ -0.93
HERC2-205ENST00000564383 WASLO00401 505 aaPredicted RBP9.24□□□□□ -0.93
HERC2-205ENST00000564383 CENPBP07199 599 aaPredicted RBP9.24□□□□□ -0.93
HERC2-205ENST00000564383 PNISRQ8TF01 805 aaKnown RBP9.24□□□□□ -0.93
HERC2-205ENST00000564383 A0A1W2PP64 1363 aa9.24□□□□□ -0.93
HERC2-205ENST00000564383 NINLQ9Y2I6 1382 aa9.24□□□□□ -0.93
HERC2-205ENST00000564383 NLRP13Q86W25 1043 aa9.23□□□□□ -0.93
HERC2-205ENST00000564383 PRR36Q9H6K5 1346 aa9.23□□□□□ -0.93
HERC2-205ENST00000564383 PIK3R4Q99570 1358 aa9.23□□□□□ -0.93
HERC2-205ENST00000564383 KCNA6P17658 529 aa9.22□□□□□ -0.93
HERC2-205ENST00000564383 PTPREP23469 700 aa9.22□□□□□ -0.93
HERC2-205ENST00000564383 PPP2R1AP30153 589 aa9.22□□□□□ -0.93
HERC2-205ENST00000564383 OXER1Q8TDS5 423 aa9.22□□□□□ -0.93
HERC2-205ENST00000564383 CABP1Q9NZU7 370 aa9.22□□□□□ -0.93
HERC2-205ENST00000564383 NCKAP5LQ9HCH0 1330 aa9.22□□□□□ -0.93
HERC2-205ENST00000564383 XRN1Q8IZH2 1706 aaKnown RBP9.22□□□□□ -0.93
HERC2-205ENST00000564383 NPHP4O75161 1426 aaPredicted RBP9.22□□□□□ -0.93
HERC2-205ENST00000564383 ECM2O94769 699 aaPredicted RBP9.21□□□□□ -0.94
HERC2-205ENST00000564383 ITGBL1O95965 494 aaPredicted RBP9.21□□□□□ -0.94
HERC2-205ENST00000564383 FAM9BQ8IZU0 186 aa9.21□□□□□ -0.94
HERC2-205ENST00000564383 ADGRB2O60241 1585 aa9.2□□□□□ -0.94
HERC2-205ENST00000564383 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.2□□□□□ -0.94
HERC2-205ENST00000564383 FOSBP53539 338 aa9.2□□□□□ -0.94
HERC2-205ENST00000564383 NUDT16Q96DE0 195 aaKnown RBP9.2□□□□□ -0.94
HERC2-205ENST00000564383 CPSF1Q10570 1443 aaKnown RBP9.2□□□□□ -0.94
HERC2-205ENST00000564383 ATP7BP35670 1465 aa9.2□□□□□ -0.94
HERC2-205ENST00000564383 NBPF3Q9H094 633 aa9.19□□□□□ -0.94
HERC2-205ENST00000564383 CGNL1Q0VF96 1302 aa9.19□□□□□ -0.94
HERC2-205ENST00000564383 USP32Q8NFA0 1604 aa9.19□□□□□ -0.94
HERC2-205ENST00000564383 HNRNPUQ00839 825 aaKnown RBP eCLIP9.18□□□□□ -0.94
HERC2-205ENST00000564383 PPIP5K1Q6PFW1 1433 aa9.18□□□□□ -0.94
HERC2-205ENST00000564383 UPF1Q92900 1129 aaKnown RBP eCLIP9.18□□□□□ -0.94
HERC2-205ENST00000564383 TERF2IPQ9NYB0 399 aa9.18□□□□□ -0.94
HERC2-205ENST00000564383 SETD1BQ9UPS6 1966 aaKnown RBP9.17□□□□□ -0.94
HERC2-205ENST00000564383 NSD2O96028 1365 aa9.17□□□□□ -0.94
HERC2-205ENST00000564383 FYB1O15117 783 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms