RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 WDR17Q8IZU2 1322 aa33.95■■■■□ 3.03
NME3-206ENST00000564252 CD163L1Q9NR16 1453 aa33.95■■■■□ 3.02
NME3-206ENST00000564252 RGPD5Q99666 1765 aa33.94■■■■□ 3.02
NME3-206ENST00000564252 RREB1Q92766 1687 aa33.93■■■■□ 3.02
NME3-206ENST00000564252 PEAK1Q9H792 1746 aa33.93■■■■□ 3.02
NME3-206ENST00000564252 WNK3Q9BYP7 1800 aa33.93■■■■□ 3.02
NME3-206ENST00000564252 SOX12O15370 315 aa33.93■■■■□ 3.02
NME3-206ENST00000564252 R3HDM1Q15032 1099 aaKnown RBP33.93■■■■□ 3.02
NME3-206ENST00000564252 USP54Q70EL1 1684 aa33.9■■■■□ 3.02
NME3-206ENST00000564252 OVOS2A0A0G2JMS6 1433 aa33.89■■■■□ 3.02
NME3-206ENST00000564252 OVOS2A0A0J9YW53 1432 aa33.89■■■■□ 3.02
NME3-206ENST00000564252 OVOS2Q6IE36 1432 aa33.89■■■■□ 3.02
NME3-206ENST00000564252 USP31Q70CQ4 1352 aa33.88■■■■□ 3.01
NME3-206ENST00000564252 C11orf95C9JLR9 678 aaPredicted RBP33.88■■■■□ 3.01
NME3-206ENST00000564252 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.88■■■■□ 3.01
NME3-206ENST00000564252 ABCC6O95255 1503 aa33.88■■■■□ 3.01
NME3-206ENST00000564252 NUP188Q5SRE5 1749 aa33.87■■■■□ 3.01
NME3-206ENST00000564252 DDB1Q16531 1140 aa33.87■■■■□ 3.01
NME3-206ENST00000564252 TMC1Q8TDI8 760 aa33.85■■■■□ 3.01
NME3-206ENST00000564252 CARD10Q9BWT7 1032 aa33.84■■■■□ 3.01
NME3-206ENST00000564252 SBF2Q86WG5 1849 aa33.83■■■■□ 3.01
NME3-206ENST00000564252 NME9Q86XW9 330 aa33.83■■■■□ 3.01
NME3-206ENST00000564252 SLC12A5Q9H2X9 1139 aa33.83■■■■□ 3.01
NME3-206ENST00000564252 CDCA7Q9BWT1 371 aaPredicted RBP33.82■■■■□ 3
NME3-206ENST00000564252 CSB-PGBD3P0DP91 1061 aa33.81■■■■□ 3
NME3-206ENST00000564252 HDGFL2Q7Z4V5 671 aaPredicted RBP33.81■■■■□ 3
NME3-206ENST00000564252 PUS7Q96PZ0 661 aaKnown RBP33.81■■■■□ 3
NME3-206ENST00000564252 EDC4Q6P2E9 1401 aaKnown RBP33.8■■■■□ 3
NME3-206ENST00000564252 A0A1W2PP64 1363 aa33.79■■■■□ 3
NME3-206ENST00000564252 MARCH10Q8NA82 808 aaPredicted RBP33.78■■■■□ 3
NME3-206ENST00000564252 TRIM26Q12899 539 aaPredicted RBP33.77■■■■□ 3
NME3-206ENST00000564252 TESK2Q96S53 571 aa33.77■■■■□ 3
NME3-206ENST00000564252 RGPD3A6NKT7 1758 aaPredicted RBP33.77■■■■□ 3
NME3-206ENST00000564252 LTN1O94822 1766 aa33.77■■■■□ 3
NME3-206ENST00000564252 RGPD4Q7Z3J3 1758 aa33.77■■■■□ 3
NME3-206ENST00000564252 CCDC7Q96M83 1385 aa33.76■■■■□ 3
NME3-206ENST00000564252 TERF2IPQ9NYB0 399 aa33.76■■■□□ 2.99
NME3-206ENST00000564252 BCL9O00512 1426 aa33.76■■■□□ 2.99
NME3-206ENST00000564252 ST20-MTHFSA0A0A6YYL1 179 aa33.73■■■□□ 2.99
NME3-206ENST00000564252 NBPF14Q5TI25 921 aa33.73■■■□□ 2.99
NME3-206ENST00000564252 PTF1AQ7RTS3 328 aa33.72■■■□□ 2.99
NME3-206ENST00000564252 BCL11BQ9C0K0 894 aaPredicted RBP33.72■■■□□ 2.99
NME3-206ENST00000564252 ERBB3P21860 1342 aa33.72■■■□□ 2.99
NME3-206ENST00000564252 PLSCR1O15162 318 aa33.71■■■□□ 2.99
NME3-206ENST00000564252 NINLQ9Y2I6 1382 aa33.7■■■□□ 2.98
NME3-206ENST00000564252 TNS2Q63HR2 1409 aa33.69■■■□□ 2.98
NME3-206ENST00000564252 EXOC5O00471 708 aa33.68■■■□□ 2.98
NME3-206ENST00000564252 ANKRD24Q8TF21 1146 aa33.64■■■□□ 2.98
NME3-206ENST00000564252 NLRP2Q9NX02 1062 aa33.64■■■□□ 2.98
NME3-206ENST00000564252 SLC24A1O60721 1099 aa33.63■■■□□ 2.97
NME3-206ENST00000564252 PROM2Q8N271 834 aa33.59■■■□□ 2.97
NME3-206ENST00000564252 IL2RBP14784 551 aa33.58■■■□□ 2.97
NME3-206ENST00000564252 ANO8Q9HCE9 1232 aaPredicted RBP33.58■■■□□ 2.97
NME3-206ENST00000564252 USP47Q96K76 1375 aa33.57■■■□□ 2.96
NME3-206ENST00000564252 NHSQ6T4R5 1651 aa33.56■■■□□ 2.96
NME3-206ENST00000564252 IP6K1Q92551 441 aa33.56■■■□□ 2.96
NME3-206ENST00000564252 ANKRD36BQ8N2N9 1353 aa33.56■■■□□ 2.96
NME3-206ENST00000564252 KCNQ2O43526 872 aa33.54■■■□□ 2.96
NME3-206ENST00000564252 COG3Q96JB2 828 aa33.54■■■□□ 2.96
NME3-206ENST00000564252 FAM208AQ9UK61 1670 aaKnown RBP33.54■■■□□ 2.96
NME3-206ENST00000564252 TMF1P82094 1093 aa33.51■■■□□ 2.95
NME3-206ENST00000564252 SPON1Q9HCB6 807 aa33.51■■■□□ 2.95
NME3-206ENST00000564252 CASZ1Q86V15 1759 aa33.51■■■□□ 2.95
NME3-206ENST00000564252 TXNRD1Q16881 649 aa33.5■■■□□ 2.95
NME3-206ENST00000564252 MAP3K19Q56UN5 1328 aa33.5■■■□□ 2.95
NME3-206ENST00000564252 FBLN1P23142 703 aa33.48■■■□□ 2.95
NME3-206ENST00000564252 ACSBG1Q96GR2 724 aa33.48■■■□□ 2.95
NME3-206ENST00000564252 LTV1Q96GA3 475 aaPredicted RBP33.47■■■□□ 2.95
NME3-206ENST00000564252 HOXC9P31274 260 aa33.46■■■□□ 2.95
NME3-206ENST00000564252 PDGFDQ9GZP0 370 aaPredicted RBP33.43■■■□□ 2.94
NME3-206ENST00000564252 BTAF1O14981 1849 aa33.43■■■□□ 2.94
NME3-206ENST00000564252 FYB1O15117 783 aa33.42■■■□□ 2.94
NME3-206ENST00000564252 AMPHP49418 695 aa33.42■■■□□ 2.94
NME3-206ENST00000564252 RGPD2P0DJD1 1756 aa33.4■■■□□ 2.94
NME3-206ENST00000564252 RTL1A6NKG5 1358 aa33.4■■■□□ 2.94
NME3-206ENST00000564252 GGNBP2Q9H3C7 697 aa33.4■■■□□ 2.94
NME3-206ENST00000564252 STK32BQ9NY57 414 aa33.4■■■□□ 2.94
NME3-206ENST00000564252 PPP1R1BQ9UD71 204 aaPredicted RBP33.4■■■□□ 2.94
NME3-206ENST00000564252 SLC15A2Q16348 729 aa33.39■■■□□ 2.94
NME3-206ENST00000564252 CDCA8Q53HL2 280 aa33.38■■■□□ 2.93
NME3-206ENST00000564252 RRS1Q15050 365 aaKnown RBP33.37■■■□□ 2.93
NME3-206ENST00000564252 KIF20BQ96Q89 1820 aa33.37■■■□□ 2.93
NME3-206ENST00000564252 MYOM1P52179 1685 aa33.36■■■□□ 2.93
NME3-206ENST00000564252 PAPPAQ13219 1627 aa33.36■■■□□ 2.93
NME3-206ENST00000564252 TIMELESSQ9UNS1 1208 aa33.36■■■□□ 2.93
NME3-206ENST00000564252 KAT6BQ8WYB5 2073 aa33.35■■■□□ 2.93
NME3-206ENST00000564252 DDX54Q8TDD1 881 aaKnown RBP33.35■■■□□ 2.93
NME3-206ENST00000564252 SHANK3Q9BYB0 1731 aa33.33■■■□□ 2.93
NME3-206ENST00000564252 ZBTB7AO95365 584 aa33.33■■■□□ 2.93
NME3-206ENST00000564252 MEGF6O75095 1541 aa33.33■■■□□ 2.93
NME3-206ENST00000564252 CLSPNQ9HAW4 1339 aa33.31■■■□□ 2.92
NME3-206ENST00000564252 PTGER2P43116 358 aa33.29■■■□□ 2.92
NME3-206ENST00000564252 NBPF6Q5VWK0 638 aa33.29■■■□□ 2.92
NME3-206ENST00000564252 NBPF4Q96M43 638 aa33.29■■■□□ 2.92
NME3-206ENST00000564252 CARD14Q9BXL6 1004 aa33.28■■■□□ 2.92
NME3-206ENST00000564252 DOT1LQ8TEK3 1739 aa33.28■■■□□ 2.92
NME3-206ENST00000564252 ZCRB1Q8TBF4 217 aaKnown RBP33.27■■■□□ 2.92
NME3-206ENST00000564252 LRRC4BQ9NT99 713 aa33.27■■■□□ 2.92
NME3-206ENST00000564252 ATF5Q9Y2D1 282 aaPredicted RBP33.26■■■□□ 2.91
NME3-206ENST00000564252 SMG6Q86US8 1419 aaKnown RBP33.26■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms