RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 EN1Q05925 392 aaPredicted RBP13.37□□□□□ -0.27
UBFD1-203ENST00000564106 SOX12O15370 315 aa13.36□□□□□ -0.27
UBFD1-203ENST00000564106 NLRP13Q86W25 1043 aa13.36□□□□□ -0.27
UBFD1-203ENST00000564106 TESK2Q96S53 571 aa13.36□□□□□ -0.27
UBFD1-203ENST00000564106 RREB1Q92766 1687 aa13.36□□□□□ -0.27
UBFD1-203ENST00000564106 PSDA5PKW4 1024 aaPredicted RBP13.35□□□□□ -0.27
UBFD1-203ENST00000564106 CCER2I3L3R5 266 aa13.35□□□□□ -0.27
UBFD1-203ENST00000564106 NUP188Q5SRE5 1749 aa13.35□□□□□ -0.27
UBFD1-203ENST00000564106 SBF2Q86WG5 1849 aa13.34□□□□□ -0.27
UBFD1-203ENST00000564106 BRD4O60885 1362 aaPredicted RBP13.34□□□□□ -0.27
UBFD1-203ENST00000564106 AATKQ6ZMQ8 1374 aa13.34□□□□□ -0.27
UBFD1-203ENST00000564106 DISP2A7MBM2 1401 aa13.34□□□□□ -0.27
UBFD1-203ENST00000564106 BARGINQ6ZT62 677 aa13.34□□□□□ -0.27
UBFD1-203ENST00000564106 PTF1AQ7RTS3 328 aa13.34□□□□□ -0.27
UBFD1-203ENST00000564106 LTN1O94822 1766 aa13.34□□□□□ -0.27
UBFD1-203ENST00000564106 KTN1Q86UP2 1357 aaKnown RBP13.33□□□□□ -0.27
UBFD1-203ENST00000564106 CRB1P82279 1406 aa13.33□□□□□ -0.28
UBFD1-203ENST00000564106 TRIM37O94972 964 aa13.33□□□□□ -0.28
UBFD1-203ENST00000564106 EZH2Q15910 746 aaKnown RBP13.33□□□□□ -0.28
UBFD1-203ENST00000564106 ARHGEF25Q86VW2 580 aa13.33□□□□□ -0.28
UBFD1-203ENST00000564106 NME9Q86XW9 330 aa13.33□□□□□ -0.28
UBFD1-203ENST00000564106 SLC12A5Q9H2X9 1139 aa13.33□□□□□ -0.28
UBFD1-203ENST00000564106 A0A1W2PP64 1363 aa13.32□□□□□ -0.28
UBFD1-203ENST00000564106 EVA1CP58658 441 aa13.32□□□□□ -0.28
UBFD1-203ENST00000564106 TCP11L2Q8N4U5 519 aa13.32□□□□□ -0.28
UBFD1-203ENST00000564106 LRP5O75197 1615 aa13.31□□□□□ -0.28
UBFD1-203ENST00000564106 MYOM1P52179 1685 aa13.31□□□□□ -0.28
UBFD1-203ENST00000564106 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.31□□□□□ -0.28
UBFD1-203ENST00000564106 CAMKK2Q96RR4 588 aa13.31□□□□□ -0.28
UBFD1-203ENST00000564106 POLR3GLQ9BT43 218 aa13.31□□□□□ -0.28
UBFD1-203ENST00000564106 SF3B2Q13435 895 aaKnown RBP13.3□□□□□ -0.28
UBFD1-203ENST00000564106 USP31Q70CQ4 1352 aa13.3□□□□□ -0.28
UBFD1-203ENST00000564106 BAG6P46379 1132 aa13.29□□□□□ -0.28
UBFD1-203ENST00000564106 WDR17Q8IZU2 1322 aa13.29□□□□□ -0.28
UBFD1-203ENST00000564106 TTC21AQ8NDW8 1320 aa13.29□□□□□ -0.28
UBFD1-203ENST00000564106 OVOS2A0A0J9YW53 1432 aa13.29□□□□□ -0.28
UBFD1-203ENST00000564106 OVOS2Q6IE36 1432 aa13.29□□□□□ -0.28
UBFD1-203ENST00000564106 FBLN1P23142 703 aa13.28□□□□□ -0.28
UBFD1-203ENST00000564106 CENPBP07199 599 aaPredicted RBP13.27□□□□□ -0.29
UBFD1-203ENST00000564106 R3HDM1Q15032 1099 aaKnown RBP13.27□□□□□ -0.29
UBFD1-203ENST00000564106 FAM196AQ6ZSG2 479 aa13.27□□□□□ -0.29
UBFD1-203ENST00000564106 TMC1Q8TDI8 760 aa13.27□□□□□ -0.29
UBFD1-203ENST00000564106 PUS7Q96PZ0 661 aaKnown RBP13.27□□□□□ -0.29
UBFD1-203ENST00000564106 ZNF692Q9BU19 519 aaPredicted RBP13.27□□□□□ -0.29
UBFD1-203ENST00000564106 RGPD2P0DJD1 1756 aa13.27□□□□□ -0.29
UBFD1-203ENST00000564106 EDC4Q6P2E9 1401 aaKnown RBP13.26□□□□□ -0.29
UBFD1-203ENST00000564106 TOM1L2Q6ZVM7 507 aa13.26□□□□□ -0.29
UBFD1-203ENST00000564106 MARCH10Q8NA82 808 aaPredicted RBP13.26□□□□□ -0.29
UBFD1-203ENST00000564106 PRKRIP1Q9H875 184 aaPredicted RBP13.26□□□□□ -0.29
UBFD1-203ENST00000564106 ABCC6O95255 1503 aa13.25□□□□□ -0.29
UBFD1-203ENST00000564106 APBA3O96018 575 aa13.25□□□□□ -0.29
UBFD1-203ENST00000564106 PDE3BQ13370 1112 aa13.25□□□□□ -0.29
UBFD1-203ENST00000564106 THRAP3Q9Y2W1 955 aaKnown RBP13.25□□□□□ -0.29
UBFD1-203ENST00000564106 OVOS2A0A0G2JMS6 1433 aa13.24□□□□□ -0.29
UBFD1-203ENST00000564106 NINLQ9Y2I6 1382 aa13.23□□□□□ -0.29
UBFD1-203ENST00000564106 KCNH5Q8NCM2 988 aa13.23□□□□□ -0.29
UBFD1-203ENST00000564106 FAM208AQ9UK61 1670 aaKnown RBP13.23□□□□□ -0.29
UBFD1-203ENST00000564106 RGPD3A6NKT7 1758 aaPredicted RBP13.22□□□□□ -0.29
UBFD1-203ENST00000564106 RGPD4Q7Z3J3 1758 aa13.22□□□□□ -0.29
UBFD1-203ENST00000564106 SHANK3Q9BYB0 1731 aa13.22□□□□□ -0.29
UBFD1-203ENST00000564106 ERBB3P21860 1342 aa13.22□□□□□ -0.29
UBFD1-203ENST00000564106 CARD10Q9BWT7 1032 aa13.22□□□□□ -0.29
UBFD1-203ENST00000564106 RALBP1Q15311 655 aa13.21□□□□□ -0.29
UBFD1-203ENST00000564106 DDB1Q16531 1140 aa13.21□□□□□ -0.29
UBFD1-203ENST00000564106 ANO8Q9HCE9 1232 aaPredicted RBP13.21□□□□□ -0.29
UBFD1-203ENST00000564106 TNS2Q63HR2 1409 aa13.21□□□□□ -0.3
UBFD1-203ENST00000564106 CSB-PGBD3P0DP91 1061 aa13.2□□□□□ -0.3
UBFD1-203ENST00000564106 PROM2Q8N271 834 aa13.2□□□□□ -0.3
UBFD1-203ENST00000564106 PDGFDQ9GZP0 370 aaPredicted RBP13.2□□□□□ -0.3
UBFD1-203ENST00000564106 NHSQ6T4R5 1651 aa13.2□□□□□ -0.3
UBFD1-203ENST00000564106 CASZ1Q86V15 1759 aa13.2□□□□□ -0.3
UBFD1-203ENST00000564106 KIF20BQ96Q89 1820 aa13.19□□□□□ -0.3
UBFD1-203ENST00000564106 KCNQ2O43526 872 aa13.19□□□□□ -0.3
UBFD1-203ENST00000564106 HDGFL2Q7Z4V5 671 aaPredicted RBP13.19□□□□□ -0.3
UBFD1-203ENST00000564106 ANKRD24Q8TF21 1146 aa13.19□□□□□ -0.3
UBFD1-203ENST00000564106 NPC1L1Q9UHC9 1359 aa13.19□□□□□ -0.3
UBFD1-203ENST00000564106 PANK3Q9H999 370 aa13.18□□□□□ -0.3
UBFD1-203ENST00000564106 KNSTRNQ9Y448 316 aa13.18□□□□□ -0.3
UBFD1-203ENST00000564106 BCL9O00512 1426 aa13.18□□□□□ -0.3
UBFD1-203ENST00000564106 ANKRD36BQ8N2N9 1353 aa13.18□□□□□ -0.3
UBFD1-203ENST00000564106 PARD3Q8TEW0 1356 aa13.18□□□□□ -0.3
UBFD1-203ENST00000564106 MAP3K19Q56UN5 1328 aa13.17□□□□□ -0.3
UBFD1-203ENST00000564106 PER1O15534 1290 aaPredicted RBP13.17□□□□□ -0.3
UBFD1-203ENST00000564106 YTHDC1Q96MU7 727 aaKnown RBP13.17□□□□□ -0.3
UBFD1-203ENST00000564106 BTAF1O14981 1849 aa13.17□□□□□ -0.3
UBFD1-203ENST00000564106 MYBBP1AQ9BQG0 1328 aaKnown RBP13.16□□□□□ -0.3
UBFD1-203ENST00000564106 LTV1Q96GA3 475 aaPredicted RBP13.16□□□□□ -0.3
UBFD1-203ENST00000564106 CARD14Q9BXL6 1004 aa13.16□□□□□ -0.3
UBFD1-203ENST00000564106 NLRP2Q9NX02 1062 aa13.16□□□□□ -0.3
UBFD1-203ENST00000564106 TERF2IPQ9NYB0 399 aa13.16□□□□□ -0.3
UBFD1-203ENST00000564106 MEGF6O75095 1541 aa13.16□□□□□ -0.3
UBFD1-203ENST00000564106 PAPPAQ13219 1627 aa13.16□□□□□ -0.3
UBFD1-203ENST00000564106 RRS1Q15050 365 aaKnown RBP13.15□□□□□ -0.3
UBFD1-203ENST00000564106 ACSBG1Q96GR2 724 aa13.15□□□□□ -0.3
UBFD1-203ENST00000564106 GGNBP2Q9H3C7 697 aa13.15□□□□□ -0.3
UBFD1-203ENST00000564106 DOT1LQ8TEK3 1739 aa13.14□□□□□ -0.31
UBFD1-203ENST00000564106 FYB1O15117 783 aa13.14□□□□□ -0.31
UBFD1-203ENST00000564106 HOXC9P31274 260 aa13.14□□□□□ -0.31
UBFD1-203ENST00000564106 IP6K1Q92551 441 aa13.14□□□□□ -0.31
UBFD1-203ENST00000564106 BCL11BQ9C0K0 894 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms