RNA–Protein interactions for RNA: ENST00000564105.5

CTU2-204, Transcript of cytosolic thiouridylase subunit 2, humanhuman

TSL 1 (best)

Gene CTU2, Length 1,586 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-204ENST00000564105 MRS2Q9HD23 443 aa25.78■■□□□ 1.72
CTU2-204ENST00000564105 ADAMTS2O95450 1211 aa25.77■■□□□ 1.72
CTU2-204ENST00000564105 ZC3H6P61129 1189 aaKnown RBP25.77■■□□□ 1.72
CTU2-204ENST00000564105 RGPD2P0DJD1 1756 aa25.76■■□□□ 1.71
CTU2-204ENST00000564105 ARHGEF25Q86VW2 580 aa25.76■■□□□ 1.71
CTU2-204ENST00000564105 ZBTB7CA1YPR0 619 aa25.75■■□□□ 1.71
CTU2-204ENST00000564105 AMPHP49418 695 aa25.75■■□□□ 1.71
CTU2-204ENST00000564105 CFAP53Q96M91 514 aa25.75■■□□□ 1.71
CTU2-204ENST00000564105 KIF24Q5T7B8 1368 aa25.75■■□□□ 1.71
CTU2-204ENST00000564105 RXRBP28702 533 aa25.74■■□□□ 1.71
CTU2-204ENST00000564105 FLT4P35916 1363 aa25.74■■□□□ 1.71
CTU2-204ENST00000564105 COL3A1P02461 1466 aaPredicted RBP25.74■■□□□ 1.71
CTU2-204ENST00000564105 RTL1A6NKG5 1358 aa25.73■■□□□ 1.71
CTU2-204ENST00000564105 CPDO75976 1380 aa25.73■■□□□ 1.71
CTU2-204ENST00000564105 KIAA0232Q92628 1395 aa25.72■■□□□ 1.71
CTU2-204ENST00000564105 COL14A1Q05707 1796 aaKnown RBP25.72■■□□□ 1.71
CTU2-204ENST00000564105 ABCC6O95255 1503 aa25.72■■□□□ 1.71
CTU2-204ENST00000564105 INSRP06213 1382 aa25.72■■□□□ 1.71
CTU2-204ENST00000564105 LMO7Q8WWI1 1683 aa25.71■■□□□ 1.71
CTU2-204ENST00000564105 HOXC9P31274 260 aa25.7■■□□□ 1.71
CTU2-204ENST00000564105 NGLY1Q96IV0 654 aa25.7■■□□□ 1.71
CTU2-204ENST00000564105 PLCH1Q4KWH8 1693 aa25.7■■□□□ 1.7
CTU2-204ENST00000564105 IP6K1Q92551 441 aa25.69■■□□□ 1.7
CTU2-204ENST00000564105 HSP90AB2PQ58FF8 381 aa25.69■■□□□ 1.7
CTU2-204ENST00000564105 QTRT2Q9H974 415 aaKnown RBP25.69■■□□□ 1.7
CTU2-204ENST00000564105 PRDM11Q9NQV5 511 aa25.68■■□□□ 1.7
CTU2-204ENST00000564105 FAM208AQ9UK61 1670 aaKnown RBP25.68■■□□□ 1.7
CTU2-204ENST00000564105 CHRNA2Q15822 529 aa25.67■■□□□ 1.7
CTU2-204ENST00000564105 RGPD1P0DJD0 1748 aa25.66■■□□□ 1.7
CTU2-204ENST00000564105 DIAPH1O60610 1272 aaKnown RBP25.66■■□□□ 1.7
CTU2-204ENST00000564105 BLMP54132 1417 aaPredicted RBP25.66■■□□□ 1.7
CTU2-204ENST00000564105 RGS12O14924 1447 aa25.65■■□□□ 1.7
CTU2-204ENST00000564105 NWD2Q9ULI1 1742 aa25.65■■□□□ 1.7
CTU2-204ENST00000564105 FNBP4Q8N3X1 1017 aaPredicted RBP25.64■■□□□ 1.69
CTU2-204ENST00000564105 PNISRQ8TF01 805 aaKnown RBP25.64■■□□□ 1.69
CTU2-204ENST00000564105 RBM6P78332 1123 aaKnown RBP25.63■■□□□ 1.69
CTU2-204ENST00000564105 AXIN2Q9Y2T1 843 aa25.63■■□□□ 1.69
CTU2-204ENST00000564105 CAMTA1Q9Y6Y1 1673 aa25.63■■□□□ 1.69
CTU2-204ENST00000564105 EIF4A2Q14240 407 aaKnown RBP25.62■■□□□ 1.69
CTU2-204ENST00000564105 USP21Q9UK80 565 aa25.62■■□□□ 1.69
CTU2-204ENST00000564105 FAM83GA6ND36 823 aa25.61■■□□□ 1.69
CTU2-204ENST00000564105 UPF1Q92900 1129 aaKnown RBP eCLIP25.61■■□□□ 1.69
CTU2-204ENST00000564105 NUDCQ9Y266 331 aa25.61■■□□□ 1.69
CTU2-204ENST00000564105 IL13P35225 146 aa25.61■■□□□ 1.69
CTU2-204ENST00000564105 WDR43Q15061 677 aaKnown RBP eCLIP25.61■■□□□ 1.69
CTU2-204ENST00000564105 FAM9BQ8IZU0 186 aa25.61■■□□□ 1.69
CTU2-204ENST00000564105 NRAPQ86VF7 1730 aa25.6■■□□□ 1.69
CTU2-204ENST00000564105 LTV1Q96GA3 475 aaPredicted RBP25.6■■□□□ 1.69
CTU2-204ENST00000564105 BCL9LQ86UU0 1499 aa25.58■■□□□ 1.69
CTU2-204ENST00000564105 U2SURPO15042 1029 aaKnown RBP25.58■■□□□ 1.69
CTU2-204ENST00000564105 ATRNO75882 1429 aa25.58■■□□□ 1.68
CTU2-204ENST00000564105 ANKRD24Q8TF21 1146 aa25.57■■□□□ 1.68
CTU2-204ENST00000564105 TRPC5Q9UL62 973 aaPredicted RBP25.56■■□□□ 1.68
CTU2-204ENST00000564105 ERBB3P21860 1342 aa25.56■■□□□ 1.68
CTU2-204ENST00000564105 COL5A2P05997 1499 aaPredicted RBP25.56■■□□□ 1.68
CTU2-204ENST00000564105 U2AF1L5P0DN76 240 aaPredicted RBP25.54■■□□□ 1.68
CTU2-204ENST00000564105 U2AF1Q01081 240 aaKnown RBP eCLIP25.54■■□□□ 1.68
CTU2-204ENST00000564105 ADAMTS8Q9UP79 889 aa25.54■■□□□ 1.68
CTU2-204ENST00000564105 BTG4Q9NY30 223 aa25.53■■□□□ 1.68
CTU2-204ENST00000564105 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.53■■□□□ 1.68
CTU2-204ENST00000564105 EP400Q96L91 3159 aa25.53■■□□□ 1.68
CTU2-204ENST00000564105 EYA1Q99502 592 aa25.52■■□□□ 1.68
CTU2-204ENST00000564105 SLIT2O94813 1529 aa25.51■■□□□ 1.67
CTU2-204ENST00000564105 CSB-PGBD3P0DP91 1061 aa25.51■■□□□ 1.67
CTU2-204ENST00000564105 IGSF1Q8N6C5 1336 aa25.5■■□□□ 1.67
CTU2-204ENST00000564105 DLG5Q8TDM6 1919 aa25.5■■□□□ 1.67
CTU2-204ENST00000564105 EVA1CP58658 441 aa25.49■■□□□ 1.67
CTU2-204ENST00000564105 STRN4Q9NRL3 753 aa25.49■■□□□ 1.67
CTU2-204ENST00000564105 WDR17Q8IZU2 1322 aa25.49■■□□□ 1.67
CTU2-204ENST00000564105 WNK3Q9BYP7 1800 aa25.48■■□□□ 1.67
CTU2-204ENST00000564105 HMOX1P09601 288 aa25.48■■□□□ 1.67
CTU2-204ENST00000564105 NBPF6Q5VWK0 638 aa25.48■■□□□ 1.67
CTU2-204ENST00000564105 NBPF4Q96M43 638 aa25.48■■□□□ 1.67
CTU2-204ENST00000564105 SULT6B1Q6IMI4 303 aa25.47■■□□□ 1.67
CTU2-204ENST00000564105 NLRP2Q9NX02 1062 aa25.46■■□□□ 1.67
CTU2-204ENST00000564105 VIRMAQ69YN4 1812 aaKnown RBP25.46■■□□□ 1.67
CTU2-204ENST00000564105 NCAPD2Q15021 1401 aa25.45■■□□□ 1.67
CTU2-204ENST00000564105 USHBP1Q8N6Y0 703 aa25.45■■□□□ 1.66
CTU2-204ENST00000564105 FCHSD2O94868 740 aa25.44■■□□□ 1.66
CTU2-204ENST00000564105 TOM1L2Q6ZVM7 507 aa25.44■■□□□ 1.66
CTU2-204ENST00000564105 AEBP1Q8IUX7 1158 aa25.44■■□□□ 1.66
CTU2-204ENST00000564105 GLI3P10071 1580 aa25.44■■□□□ 1.66
CTU2-204ENST00000564105 KDRP35968 1356 aa25.44■■□□□ 1.66
CTU2-204ENST00000564105 PARP4Q9UKK3 1724 aaKnown RBP25.44■■□□□ 1.66
CTU2-204ENST00000564105 LARP1Q6PKG0 1096 aaKnown RBP25.44■■□□□ 1.66
CTU2-204ENST00000564105 UNC5CLQ8IV45 518 aa25.44■■□□□ 1.66
CTU2-204ENST00000564105 GJD4Q96KN9 370 aaPredicted RBP25.44■■□□□ 1.66
CTU2-204ENST00000564105 RSPH6AQ9H0K4 717 aa25.44■■□□□ 1.66
CTU2-204ENST00000564105 CRB1P82279 1406 aa25.43■■□□□ 1.66
CTU2-204ENST00000564105 CCDC146Q8IYE0 955 aa25.43■■□□□ 1.66
CTU2-204ENST00000564105 PNNQ9H307 717 aaKnown RBP25.43■■□□□ 1.66
CTU2-204ENST00000564105 PRKAR2BP31323 418 aa25.41■■□□□ 1.66
CTU2-204ENST00000564105 RUNDC1Q96C34 613 aa25.39■■□□□ 1.66
CTU2-204ENST00000564105 PLEKHF1Q96S99 279 aa25.39■■□□□ 1.66
CTU2-204ENST00000564105 CARD10Q9BWT7 1032 aa25.39■■□□□ 1.66
CTU2-204ENST00000564105 PKD1L3Q7Z443 1732 aa25.36■■□□□ 1.65
CTU2-204ENST00000564105 MAPK8IP3Q9UPT6 1336 aa25.36■■□□□ 1.65
CTU2-204ENST00000564105 NEFMP07197 916 aa25.36■■□□□ 1.65
CTU2-204ENST00000564105 BRWD3Q6RI45 1802 aa25.35■■□□□ 1.65
CTU2-204ENST00000564105 USP35Q9P2H5 1018 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms