RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 MCCD1P59942 119 aaPredicted RBP7.17□□□□□ -1.26
TUBGCP4-207ENST00000563963 ZC3H12AQ5D1E8 599 aaKnown RBP7.17□□□□□ -1.26
TUBGCP4-207ENST00000563963 RANBP17Q9H2T7 1088 aaKnown RBP7.17□□□□□ -1.26
TUBGCP4-207ENST00000563963 DHX57Q6P158 1386 aaKnown RBP7.16□□□□□ -1.26
TUBGCP4-207ENST00000563963 EXOC5O00471 708 aa7.16□□□□□ -1.26
TUBGCP4-207ENST00000563963 KIF5CO60282 957 aa7.16□□□□□ -1.26
TUBGCP4-207ENST00000563963 GABPB1Q06547 395 aaPredicted RBP7.16□□□□□ -1.26
TUBGCP4-207ENST00000563963 SUFUQ9UMX1 484 aa7.16□□□□□ -1.26
TUBGCP4-207ENST00000563963 CTDP1Q9Y5B0 961 aaPredicted RBP7.16□□□□□ -1.26
TUBGCP4-207ENST00000563963 RAB11FIP3O75154 756 aa7.16□□□□□ -1.26
TUBGCP4-207ENST00000563963 ARHGEF10LQ9HCE6 1279 aa7.16□□□□□ -1.26
TUBGCP4-207ENST00000563963 CCT2P78371 535 aaKnown RBP7.15□□□□□ -1.26
TUBGCP4-207ENST00000563963 SPOCK3Q9BQ16 436 aa7.15□□□□□ -1.26
TUBGCP4-207ENST00000563963 RMI1Q9H9A7 625 aa7.15□□□□□ -1.26
TUBGCP4-207ENST00000563963 CCDC196A0A1B0GTZ2 297 aa7.15□□□□□ -1.26
TUBGCP4-207ENST00000563963 IPO5O00410 1097 aaKnown RBP7.15□□□□□ -1.26
TUBGCP4-207ENST00000563963 GUCY2CP25092 1073 aa7.15□□□□□ -1.26
TUBGCP4-207ENST00000563963 PPP2R5AQ15172 486 aa7.15□□□□□ -1.26
TUBGCP4-207ENST00000563963 KLHL23Q8NBE8 558 aa7.15□□□□□ -1.26
TUBGCP4-207ENST00000563963 COMMD10Q9Y6G5 202 aa7.15□□□□□ -1.26
TUBGCP4-207ENST00000563963 DDX10Q13206 875 aaKnown RBP7.15□□□□□ -1.27
TUBGCP4-207ENST00000563963 FAM184AQ8NB25 1140 aa7.15□□□□□ -1.27
TUBGCP4-207ENST00000563963 SIRT1Q96EB6 747 aa7.15□□□□□ -1.27
TUBGCP4-207ENST00000563963 LARP6Q9BRS8 491 aaKnown RBP7.15□□□□□ -1.27
TUBGCP4-207ENST00000563963 R3HCC1Q9Y3T6 440 aaKnown RBP7.15□□□□□ -1.27
TUBGCP4-207ENST00000563963 CSB-PGBD3P0DP91 1061 aa7.15□□□□□ -1.27
TUBGCP4-207ENST00000563963 MRE11P49959 708 aa7.15□□□□□ -1.27
TUBGCP4-207ENST00000563963 RIPK4P57078 832 aa7.15□□□□□ -1.27
TUBGCP4-207ENST00000563963 TAX1BP1Q86VP1 789 aa7.15□□□□□ -1.27
TUBGCP4-207ENST00000563963 RASSF4Q9H2L5 321 aa7.15□□□□□ -1.27
TUBGCP4-207ENST00000563963 ADCY10Q96PN6 1610 aa7.14□□□□□ -1.27
TUBGCP4-207ENST00000563963 ATP6V1AP38606 617 aa7.14□□□□□ -1.27
TUBGCP4-207ENST00000563963 PKD2Q13563 968 aa7.14□□□□□ -1.27
TUBGCP4-207ENST00000563963 BECN1Q14457 450 aa7.14□□□□□ -1.27
TUBGCP4-207ENST00000563963 JAKMIP3Q5VZ66 844 aa7.14□□□□□ -1.27
TUBGCP4-207ENST00000563963 CACTIN-AS1Q8N1I8 211 aa7.14□□□□□ -1.27
TUBGCP4-207ENST00000563963 RSPH14Q9UHP6 348 aa7.14□□□□□ -1.27
TUBGCP4-207ENST00000563963 DMRT2Q9Y5R5 561 aa7.14□□□□□ -1.27
TUBGCP4-207ENST00000563963 NINLQ9Y2I6 1382 aa7.14□□□□□ -1.27
TUBGCP4-207ENST00000563963 CD151P48509 253 aa7.14□□□□□ -1.27
TUBGCP4-207ENST00000563963 CHAF1AQ13111 956 aaPredicted RBP7.14□□□□□ -1.27
TUBGCP4-207ENST00000563963 PDILTQ8N807 584 aa7.14□□□□□ -1.27
TUBGCP4-207ENST00000563963 IRAK4Q9NWZ3 460 aa7.14□□□□□ -1.27
TUBGCP4-207ENST00000563963 ABCC2Q92887 1545 aa7.14□□□□□ -1.27
TUBGCP4-207ENST00000563963 HSP90AB1P08238 724 aaKnown RBP7.14□□□□□ -1.27
TUBGCP4-207ENST00000563963 FLT3P36888 993 aa7.14□□□□□ -1.27
TUBGCP4-207ENST00000563963 ATF5Q9Y2D1 282 aaPredicted RBP7.14□□□□□ -1.27
TUBGCP4-207ENST00000563963 C16orf87Q6PH81 154 aa7.13□□□□□ -1.27
TUBGCP4-207ENST00000563963 CPSF2Q9P2I0 782 aaKnown RBP7.13□□□□□ -1.27
TUBGCP4-207ENST00000563963 CFAP43Q8NDM7 1665 aa7.13□□□□□ -1.27
TUBGCP4-207ENST00000563963 NBPF7P0C2Y1 421 aaPredicted RBP7.13□□□□□ -1.27
TUBGCP4-207ENST00000563963 NOM1Q5C9Z4 860 aaKnown RBP7.13□□□□□ -1.27
TUBGCP4-207ENST00000563963 C1QTNF12Q5T7M4 302 aa7.13□□□□□ -1.27
TUBGCP4-207ENST00000563963 AP1ARQ63HQ0 302 aa7.13□□□□□ -1.27
TUBGCP4-207ENST00000563963 CXorf56Q9H5V9 222 aa7.13□□□□□ -1.27
TUBGCP4-207ENST00000563963 MAP3K4Q9Y6R4 1608 aa7.13□□□□□ -1.27
TUBGCP4-207ENST00000563963 CAPN2P17655 700 aa7.13□□□□□ -1.27
TUBGCP4-207ENST00000563963 AMOTL1Q8IY63 956 aa7.13□□□□□ -1.27
TUBGCP4-207ENST00000563963 TRIM52Q96A61 297 aa7.13□□□□□ -1.27
TUBGCP4-207ENST00000563963 C22orf23Q9BZE7 217 aa7.13□□□□□ -1.27
TUBGCP4-207ENST00000563963 KIF27Q86VH2 1401 aa7.12□□□□□ -1.27
TUBGCP4-207ENST00000563963 FAM200BP0CF97 657 aa7.12□□□□□ -1.27
TUBGCP4-207ENST00000563963 PUF60Q9UHX1 559 aaKnown RBP7.12□□□□□ -1.27
TUBGCP4-207ENST00000563963 KIF2CQ99661 725 aa7.12□□□□□ -1.27
TUBGCP4-207ENST00000563963 JADE2Q9NQC1 790 aa7.12□□□□□ -1.27
TUBGCP4-207ENST00000563963 FOXD4L1Q9NU39 408 aa7.12□□□□□ -1.27
TUBGCP4-207ENST00000563963 SWT1Q5T5J6 900 aaKnown RBP7.12□□□□□ -1.27
TUBGCP4-207ENST00000563963 SMC5Q8IY18 1101 aa7.12□□□□□ -1.27
TUBGCP4-207ENST00000563963 CCDC34Q96HJ3 373 aa7.12□□□□□ -1.27
TUBGCP4-207ENST00000563963 MAF1Q9H063 256 aa7.12□□□□□ -1.27
TUBGCP4-207ENST00000563963 SYNRGQ9UMZ2 1314 aa7.11□□□□□ -1.27
TUBGCP4-207ENST00000563963 TULP2O00295 520 aa7.11□□□□□ -1.27
TUBGCP4-207ENST00000563963 MLECQ14165 292 aa7.11□□□□□ -1.27
TUBGCP4-207ENST00000563963 STK11IPQ8N1F8 1099 aa7.11□□□□□ -1.27
TUBGCP4-207ENST00000563963 IQCGQ9H095 443 aaKnown RBP7.11□□□□□ -1.27
TUBGCP4-207ENST00000563963 HECW2Q9P2P5 1572 aa7.11□□□□□ -1.27
TUBGCP4-207ENST00000563963 NAT1P18440 290 aa7.11□□□□□ -1.27
TUBGCP4-207ENST00000563963 CWC25Q9NXE8 425 aaPredicted RBP7.11□□□□□ -1.27
TUBGCP4-207ENST00000563963 KLHL10Q6JEL2 608 aa7.11□□□□□ -1.27
TUBGCP4-207ENST00000563963 ARPC5LQ9BPX5 153 aa7.11□□□□□ -1.27
TUBGCP4-207ENST00000563963 ZSCAN26Q16670 478 aa7.11□□□□□ -1.27
TUBGCP4-207ENST00000563963 RETREG2Q8NC44 543 aa7.11□□□□□ -1.27
TUBGCP4-207ENST00000563963 BORCS6Q96GS4 357 aa7.11□□□□□ -1.27
TUBGCP4-207ENST00000563963 TOMM22Q9NS69 142 aa7.11□□□□□ -1.27
TUBGCP4-207ENST00000563963 UTP6Q9NYH9 597 aaKnown RBP7.11□□□□□ -1.27
TUBGCP4-207ENST00000563963 CAPN15O75808 1086 aa7.1□□□□□ -1.27
TUBGCP4-207ENST00000563963 MCM6Q14566 821 aa7.1□□□□□ -1.27
TUBGCP4-207ENST00000563963 CBFA2T2O43439 604 aa7.1□□□□□ -1.27
TUBGCP4-207ENST00000563963 IRX1P78414 480 aaPredicted RBP7.1□□□□□ -1.27
TUBGCP4-207ENST00000563963 HNRNPUQ00839 825 aaKnown RBP eCLIP7.1□□□□□ -1.27
TUBGCP4-207ENST00000563963 CLEC4GQ6UXB4 293 aa7.1□□□□□ -1.27
TUBGCP4-207ENST00000563963 FMNL3Q8IVF7 1028 aa7.1□□□□□ -1.27
TUBGCP4-207ENST00000563963 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.1□□□□□ -1.27
TUBGCP4-207ENST00000563963 DRC1Q96MC2 740 aa7.1□□□□□ -1.27
TUBGCP4-207ENST00000563963 ZNF396Q96N95 335 aaPredicted RBP7.1□□□□□ -1.27
TUBGCP4-207ENST00000563963 KIF21BO75037 1637 aa7.1□□□□□ -1.27
TUBGCP4-207ENST00000563963 IQGAP2Q13576 1575 aa7.1□□□□□ -1.27
TUBGCP4-207ENST00000563963 RGL2O15211 777 aa7.1□□□□□ -1.27
TUBGCP4-207ENST00000563963 SASS6Q6UVJ0 657 aa7.1□□□□□ -1.27
TUBGCP4-207ENST00000563963 JPH4Q96JJ6 628 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms