RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 ARHGEF25Q86VW2 580 aa13.48□□□□□ -0.25
CLN6-203ENST00000563917 CAMKK2Q96RR4 588 aa13.48□□□□□ -0.25
CLN6-203ENST00000563917 OVOS2A0A0G2JMS6 1433 aa13.47□□□□□ -0.25
CLN6-203ENST00000563917 OVOS2A0A0J9YW53 1432 aa13.47□□□□□ -0.25
CLN6-203ENST00000563917 CPSF1Q10570 1443 aaKnown RBP13.47□□□□□ -0.25
CLN6-203ENST00000563917 OVOS2Q6IE36 1432 aa13.47□□□□□ -0.25
CLN6-203ENST00000563917 TNS1Q9HBL0 1735 aaKnown RBP13.47□□□□□ -0.25
CLN6-203ENST00000563917 TRIM26Q12899 539 aaPredicted RBP13.47□□□□□ -0.25
CLN6-203ENST00000563917 AKAP12Q02952 1782 aa13.47□□□□□ -0.25
CLN6-203ENST00000563917 PARP4Q9UKK3 1724 aaKnown RBP13.46□□□□□ -0.25
CLN6-203ENST00000563917 PUS7Q96PZ0 661 aaKnown RBP13.45□□□□□ -0.26
CLN6-203ENST00000563917 CARD10Q9BWT7 1032 aa13.45□□□□□ -0.26
CLN6-203ENST00000563917 AXIN2Q9Y2T1 843 aa13.45□□□□□ -0.26
CLN6-203ENST00000563917 LRP5O75197 1615 aa13.45□□□□□ -0.26
CLN6-203ENST00000563917 EXOC5O00471 708 aa13.44□□□□□ -0.26
CLN6-203ENST00000563917 CCDC7Q96M83 1385 aa13.44□□□□□ -0.26
CLN6-203ENST00000563917 SLC12A5Q9H2X9 1139 aa13.43□□□□□ -0.26
CLN6-203ENST00000563917 USP31Q70CQ4 1352 aa13.43□□□□□ -0.26
CLN6-203ENST00000563917 MON2Q7Z3U7 1717 aa13.42□□□□□ -0.26
CLN6-203ENST00000563917 EDC4Q6P2E9 1401 aaKnown RBP13.42□□□□□ -0.26
CLN6-203ENST00000563917 NME9Q86XW9 330 aa13.42□□□□□ -0.26
CLN6-203ENST00000563917 NLRP2Q9NX02 1062 aa13.42□□□□□ -0.26
CLN6-203ENST00000563917 NINLQ9Y2I6 1382 aa13.42□□□□□ -0.26
CLN6-203ENST00000563917 COL18A1P39060 1754 aa13.41□□□□□ -0.26
CLN6-203ENST00000563917 ABCC6O95255 1503 aa13.41□□□□□ -0.26
CLN6-203ENST00000563917 BCL11BQ9C0K0 894 aaPredicted RBP13.41□□□□□ -0.26
CLN6-203ENST00000563917 ST20-MTHFSA0A0A6YYL1 179 aa13.4□□□□□ -0.26
CLN6-203ENST00000563917 PLSCR1O15162 318 aa13.4□□□□□ -0.26
CLN6-203ENST00000563917 NFAT5O94916 1531 aa13.39□□□□□ -0.27
CLN6-203ENST00000563917 LRRC37A3O60309 1634 aa13.39□□□□□ -0.27
CLN6-203ENST00000563917 COG3Q96JB2 828 aa13.39□□□□□ -0.27
CLN6-203ENST00000563917 PPP1R1BQ9UD71 204 aaPredicted RBP13.39□□□□□ -0.27
CLN6-203ENST00000563917 RGPD5Q99666 1765 aa13.38□□□□□ -0.27
CLN6-203ENST00000563917 A0A1W2PP64 1363 aa13.38□□□□□ -0.27
CLN6-203ENST00000563917 TMF1P82094 1093 aa13.38□□□□□ -0.27
CLN6-203ENST00000563917 MARCH10Q8NA82 808 aaPredicted RBP13.38□□□□□ -0.27
CLN6-203ENST00000563917 SRCAPQ6ZRS2 3230 aa13.38□□□□□ -0.27
CLN6-203ENST00000563917 ERBB3P21860 1342 aa13.38□□□□□ -0.27
CLN6-203ENST00000563917 CD163L1Q9NR16 1453 aa13.37□□□□□ -0.27
CLN6-203ENST00000563917 DCAF8L1A6NGE4 600 aa13.37□□□□□ -0.27
CLN6-203ENST00000563917 IL2RBP14784 551 aa13.37□□□□□ -0.27
CLN6-203ENST00000563917 CDCA8Q53HL2 280 aa13.37□□□□□ -0.27
CLN6-203ENST00000563917 ANKRD24Q8TF21 1146 aa13.37□□□□□ -0.27
CLN6-203ENST00000563917 SPON1Q9HCB6 807 aa13.37□□□□□ -0.27
CLN6-203ENST00000563917 RREB1Q92766 1687 aa13.37□□□□□ -0.27
CLN6-203ENST00000563917 AMPHP49418 695 aa13.36□□□□□ -0.27
CLN6-203ENST00000563917 BCL9O00512 1426 aa13.36□□□□□ -0.27
CLN6-203ENST00000563917 WNK3Q9BYP7 1800 aa13.36□□□□□ -0.27
CLN6-203ENST00000563917 NUP188Q5SRE5 1749 aa13.36□□□□□ -0.27
CLN6-203ENST00000563917 PEAK1Q9H792 1746 aa13.36□□□□□ -0.27
CLN6-203ENST00000563917 TESK2Q96S53 571 aa13.35□□□□□ -0.27
CLN6-203ENST00000563917 TNS2Q63HR2 1409 aa13.35□□□□□ -0.27
CLN6-203ENST00000563917 LTN1O94822 1766 aa13.35□□□□□ -0.27
CLN6-203ENST00000563917 USP54Q70EL1 1684 aa13.34□□□□□ -0.27
CLN6-203ENST00000563917 KCNQ2O43526 872 aa13.34□□□□□ -0.27
CLN6-203ENST00000563917 IP6K1Q92551 441 aa13.34□□□□□ -0.27
CLN6-203ENST00000563917 LTV1Q96GA3 475 aaPredicted RBP13.34□□□□□ -0.27
CLN6-203ENST00000563917 STK32BQ9NY57 414 aa13.34□□□□□ -0.27
CLN6-203ENST00000563917 RGPD3A6NKT7 1758 aaPredicted RBP13.34□□□□□ -0.27
CLN6-203ENST00000563917 RGPD4Q7Z3J3 1758 aa13.34□□□□□ -0.27
CLN6-203ENST00000563917 SBF2Q86WG5 1849 aa13.34□□□□□ -0.27
CLN6-203ENST00000563917 ANKRD36BQ8N2N9 1353 aa13.32□□□□□ -0.28
CLN6-203ENST00000563917 USP47Q96K76 1375 aa13.32□□□□□ -0.28
CLN6-203ENST00000563917 TXNRD1Q16881 649 aa13.32□□□□□ -0.28
CLN6-203ENST00000563917 ACSBG1Q96GR2 724 aa13.32□□□□□ -0.28
CLN6-203ENST00000563917 PTF1AQ7RTS3 328 aa13.31□□□□□ -0.28
CLN6-203ENST00000563917 TIMELESSQ9UNS1 1208 aa13.31□□□□□ -0.28
CLN6-203ENST00000563917 DDX54Q8TDD1 881 aaKnown RBP13.3□□□□□ -0.28
CLN6-203ENST00000563917 PCGF6Q9BYE7 350 aa13.29□□□□□ -0.28
CLN6-203ENST00000563917 MAP3K19Q56UN5 1328 aa13.29□□□□□ -0.28
CLN6-203ENST00000563917 SMG6Q86US8 1419 aaKnown RBP13.29□□□□□ -0.28
CLN6-203ENST00000563917 KAT6BQ8WYB5 2073 aa13.28□□□□□ -0.28
CLN6-203ENST00000563917 HOXC9P31274 260 aa13.28□□□□□ -0.28
CLN6-203ENST00000563917 PROM2Q8N271 834 aa13.28□□□□□ -0.28
CLN6-203ENST00000563917 ANO8Q9HCE9 1232 aaPredicted RBP13.28□□□□□ -0.28
CLN6-203ENST00000563917 FAM208AQ9UK61 1670 aaKnown RBP13.28□□□□□ -0.28
CLN6-203ENST00000563917 SLC15A2Q16348 729 aa13.27□□□□□ -0.29
CLN6-203ENST00000563917 SYTL4Q96C24 671 aaPredicted RBP13.27□□□□□ -0.29
CLN6-203ENST00000563917 GGNBP2Q9H3C7 697 aa13.27□□□□□ -0.29
CLN6-203ENST00000563917 CLSPNQ9HAW4 1339 aa13.27□□□□□ -0.29
CLN6-203ENST00000563917 RTL1A6NKG5 1358 aa13.27□□□□□ -0.29
CLN6-203ENST00000563917 FYB1O15117 783 aa13.26□□□□□ -0.29
CLN6-203ENST00000563917 ZBTB7AO95365 584 aa13.26□□□□□ -0.29
CLN6-203ENST00000563917 NHSQ6T4R5 1651 aa13.26□□□□□ -0.29
CLN6-203ENST00000563917 RAPGEF4Q8WZA2 1011 aa13.26□□□□□ -0.29
CLN6-203ENST00000563917 RRS1Q15050 365 aaKnown RBP13.25□□□□□ -0.29
CLN6-203ENST00000563917 ZCRB1Q8TBF4 217 aaKnown RBP13.25□□□□□ -0.29
CLN6-203ENST00000563917 CGNL1Q0VF96 1302 aa13.24□□□□□ -0.29
CLN6-203ENST00000563917 FBLN1P23142 703 aa13.24□□□□□ -0.29
CLN6-203ENST00000563917 ATF5Q9Y2D1 282 aaPredicted RBP13.24□□□□□ -0.29
CLN6-203ENST00000563917 TATP17735 454 aaPredicted RBP13.23□□□□□ -0.29
CLN6-203ENST00000563917 HMGB2P26583 209 aaKnown RBP13.23□□□□□ -0.29
CLN6-203ENST00000563917 SLC27A3Q5K4L6 730 aa13.23□□□□□ -0.29
CLN6-203ENST00000563917 POLR3GLQ9BT43 218 aa13.23□□□□□ -0.29
CLN6-203ENST00000563917 MTFR1LQ9H019 292 aa13.23□□□□□ -0.29
CLN6-203ENST00000563917 FLT4P35916 1363 aa13.21□□□□□ -0.29
CLN6-203ENST00000563917 KIF24Q5T7B8 1368 aa13.21□□□□□ -0.29
CLN6-203ENST00000563917 BTAF1O14981 1849 aa13.21□□□□□ -0.29
CLN6-203ENST00000563917 PRIM1P49642 420 aaKnown RBP13.21□□□□□ -0.29
CLN6-203ENST00000563917 CASZ1Q86V15 1759 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms