RNA–Protein interactions for RNA: ENST00000563836.1

SMG1-209, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-209ENST00000563836 ABCA8O94911 1581 aa12.32□□□□□ -0.44
SMG1-209ENST00000563836 PLEKHD1A6NEE1 506 aa12.32□□□□□ -0.44
SMG1-209ENST00000563836 PER1O15534 1290 aaPredicted RBP12.32□□□□□ -0.44
SMG1-209ENST00000563836 SLC19A1P41440 591 aa12.32□□□□□ -0.44
SMG1-209ENST00000563836 RPIAP49247 311 aa12.32□□□□□ -0.44
SMG1-209ENST00000563836 CCDC24Q8N4L8 307 aa12.32□□□□□ -0.44
SMG1-209ENST00000563836 PLB1Q6P1J6 1458 aa12.32□□□□□ -0.44
SMG1-209ENST00000563836 ARID3CA6NKF2 412 aa12.31□□□□□ -0.44
SMG1-209ENST00000563836 CTDSPL2Q05D32 466 aa12.31□□□□□ -0.44
SMG1-209ENST00000563836 KANK4Q5T7N3 995 aaPredicted RBP12.31□□□□□ -0.44
SMG1-209ENST00000563836 LRRIQ1Q96JM4 1722 aa12.31□□□□□ -0.44
SMG1-209ENST00000563836 TMEM259Q4ZIN3 620 aa12.3□□□□□ -0.44
SMG1-209ENST00000563836 NUP153P49790 1475 aaKnown RBP12.29□□□□□ -0.44
SMG1-209ENST00000563836 AP1G2O75843 785 aa12.29□□□□□ -0.44
SMG1-209ENST00000563836 F12P00748 615 aaPredicted RBP12.29□□□□□ -0.44
SMG1-209ENST00000563836 KCNH2Q12809 1159 aa12.29□□□□□ -0.44
SMG1-209ENST00000563836 CDK13Q14004 1512 aaKnown RBP12.28□□□□□ -0.44
SMG1-209ENST00000563836 ABCC2Q92887 1545 aa12.28□□□□□ -0.44
SMG1-209ENST00000563836 ZBTB24O43167 697 aaPredicted RBP12.28□□□□□ -0.44
SMG1-209ENST00000563836 SPRYD7Q5W111 196 aa12.28□□□□□ -0.44
SMG1-209ENST00000563836 PTCRAQ6ISU1 281 aaPredicted RBP12.28□□□□□ -0.44
SMG1-209ENST00000563836 ERCC6L2Q5T890 1561 aa12.26□□□□□ -0.45
SMG1-209ENST00000563836 UHRF1BP1LA0JNW5 1464 aa12.26□□□□□ -0.45
SMG1-209ENST00000563836 MAP10Q9P2G4 905 aa12.25□□□□□ -0.45
SMG1-209ENST00000563836 CD2BP2O95400 341 aaKnown RBP12.24□□□□□ -0.45
SMG1-209ENST00000563836 USP17L8P0C7I0 530 aa12.24□□□□□ -0.45
SMG1-209ENST00000563836 TROQ12816 1431 aaPredicted RBP12.24□□□□□ -0.45
SMG1-209ENST00000563836 TRIM32Q13049 653 aa12.24□□□□□ -0.45
SMG1-209ENST00000563836 KIF14Q15058 1648 aa12.24□□□□□ -0.45
SMG1-209ENST00000563836 LRRN4Q8WUT4 740 aa12.24□□□□□ -0.45
SMG1-209ENST00000563836 UNC93B1Q9H1C4 597 aa12.24□□□□□ -0.45
SMG1-209ENST00000563836 NCOA2Q15596 1464 aa12.23□□□□□ -0.45
SMG1-209ENST00000563836 CCNB3Q8WWL7 1395 aa12.23□□□□□ -0.45
SMG1-209ENST00000563836 CTHP32929 405 aa12.23□□□□□ -0.45
SMG1-209ENST00000563836 ZNF598Q86UK7 904 aaKnown RBP12.23□□□□□ -0.45
SMG1-209ENST00000563836 BANK1Q8NDB2 785 aa12.23□□□□□ -0.45
SMG1-209ENST00000563836 ITSN2Q9NZM3 1697 aa12.22□□□□□ -0.45
SMG1-209ENST00000563836 ATP10BO94823 1461 aa12.22□□□□□ -0.45
SMG1-209ENST00000563836 FAM50AQ14320 339 aaKnown RBP12.22□□□□□ -0.45
SMG1-209ENST00000563836 ARHGEF11O15085 1522 aa12.21□□□□□ -0.46
SMG1-209ENST00000563836 RRBP1Q9P2E9 1410 aaKnown RBP12.2□□□□□ -0.46
SMG1-209ENST00000563836 ZCCHC11Q5TAX3 1644 aaKnown RBP12.2□□□□□ -0.46
SMG1-209ENST00000563836 ADCY10Q96PN6 1610 aa12.2□□□□□ -0.46
SMG1-209ENST00000563836 ZNF697Q5TEC3 545 aa12.2□□□□□ -0.46
SMG1-209ENST00000563836 MYOM3Q5VTT5 1437 aa12.2□□□□□ -0.46
SMG1-209ENST00000563836 HMX1Q9NP08 348 aaPredicted RBP12.19□□□□□ -0.46
SMG1-209ENST00000563836 KDM5BQ9UGL1 1544 aa12.18□□□□□ -0.46
SMG1-209ENST00000563836 PHLDB1Q86UU1 1377 aa12.18□□□□□ -0.46
SMG1-209ENST00000563836 SOCS7O14512 581 aa12.17□□□□□ -0.46
SMG1-209ENST00000563836 WNT7BP56706 349 aa12.17□□□□□ -0.46
SMG1-209ENST00000563836 RIMBP3CA6NJZ7 1639 aa12.17□□□□□ -0.46
SMG1-209ENST00000563836 RIMBP3BA6NNM3 1639 aa12.17□□□□□ -0.46
SMG1-209ENST00000563836 RIMBP3Q9UFD9 1639 aa12.17□□□□□ -0.46
SMG1-209ENST00000563836 MIA2Q96PC5 1412 aa12.17□□□□□ -0.46
SMG1-209ENST00000563836 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.17□□□□□ -0.46
SMG1-209ENST00000563836 MAGI3Q5TCQ9 1506 aa12.16□□□□□ -0.46
SMG1-209ENST00000563836 SKOR1P84550 965 aa12.16□□□□□ -0.46
SMG1-209ENST00000563836 NR6A1Q15406 480 aa12.16□□□□□ -0.46
SMG1-209ENST00000563836 BAP1Q92560 729 aa12.16□□□□□ -0.46
SMG1-209ENST00000563836 CFDP1Q9UEE9 299 aaPredicted RBP12.16□□□□□ -0.46
SMG1-209ENST00000563836 FGD6Q6ZV73 1430 aa12.16□□□□□ -0.46
SMG1-209ENST00000563836 ITGAEP38570 1179 aa12.15□□□□□ -0.46
SMG1-209ENST00000563836 ARMC2Q8NEN0 867 aa12.15□□□□□ -0.46
SMG1-209ENST00000563836 PTPN23Q9H3S7 1636 aa12.15□□□□□ -0.47
SMG1-209ENST00000563836 SH3BP2P78314 561 aa12.14□□□□□ -0.47
SMG1-209ENST00000563836 CYB5RLQ6IPT4 315 aa12.14□□□□□ -0.47
SMG1-209ENST00000563836 TRIM67Q6ZTA4 783 aa12.14□□□□□ -0.47
SMG1-209ENST00000563836 ZNF511Q8NB15 262 aa12.14□□□□□ -0.47
SMG1-209ENST00000563836 EPS8L1Q8TE68 723 aa12.14□□□□□ -0.47
SMG1-209ENST00000563836 TRIM34Q9BYJ4 488 aa12.14□□□□□ -0.47
SMG1-209ENST00000563836 SNRKQ9NRH2 765 aa12.14□□□□□ -0.47
SMG1-209ENST00000563836 GDF9O60383 454 aa12.13□□□□□ -0.47
SMG1-209ENST00000563836 MTMR14Q8NCE2 650 aa12.13□□□□□ -0.47
SMG1-209ENST00000563836 GJD4Q96KN9 370 aaPredicted RBP12.13□□□□□ -0.47
SMG1-209ENST00000563836 PKD2L1Q9P0L9 805 aa12.13□□□□□ -0.47
SMG1-209ENST00000563836 LINC01559Q495D7 138 aa12.12□□□□□ -0.47
SMG1-209ENST00000563836 ZNF777Q9ULD5 760 aaPredicted RBP12.12□□□□□ -0.47
SMG1-209ENST00000563836 MYO5CQ9NQX4 1742 aa12.11□□□□□ -0.47
SMG1-209ENST00000563836 WDR7Q9Y4E6 1490 aa12.11□□□□□ -0.47
SMG1-209ENST00000563836 WNT7AO00755 349 aa12.11□□□□□ -0.47
SMG1-209ENST00000563836 PRR20EP86478 221 aa12.11□□□□□ -0.47
SMG1-209ENST00000563836 PRR20CP86479 221 aa12.11□□□□□ -0.47
SMG1-209ENST00000563836 PRR20DP86480 221 aa12.11□□□□□ -0.47
SMG1-209ENST00000563836 PRR20BP86481 221 aa12.11□□□□□ -0.47
SMG1-209ENST00000563836 PRR20AP86496 221 aa12.11□□□□□ -0.47
SMG1-209ENST00000563836 GPKOWQ92917 476 aaPredicted RBP eCLIP12.11□□□□□ -0.47
SMG1-209ENST00000563836 FKBPLQ9UIM3 349 aa12.11□□□□□ -0.47
SMG1-209ENST00000563836 NBPF14Q5TI25 921 aa12.1□□□□□ -0.47
SMG1-209ENST00000563836 ZC3H4Q9UPT8 1303 aaKnown RBP12.1□□□□□ -0.47
SMG1-209ENST00000563836 CDC42BPAQ5VT25 1732 aa12.09□□□□□ -0.47
SMG1-209ENST00000563836 RC3H1Q5TC82 1133 aaKnown RBP12.09□□□□□ -0.47
SMG1-209ENST00000563836 ARHGAP5Q13017 1502 aa12.08□□□□□ -0.48
SMG1-209ENST00000563836 FOXC1Q12948 553 aa12.08□□□□□ -0.48
SMG1-209ENST00000563836 PDZRN3Q9UPQ7 1066 aa12.08□□□□□ -0.48
SMG1-209ENST00000563836 ASXL2Q76L83 1435 aa12.08□□□□□ -0.48
SMG1-209ENST00000563836 ACIN1Q9UKV3 1341 aaKnown RBP12.08□□□□□ -0.48
SMG1-209ENST00000563836 TCOF1Q13428 1488 aaKnown RBP12.08□□□□□ -0.48
SMG1-209ENST00000563836 GPATCH8Q9UKJ3 1502 aaKnown RBP12.07□□□□□ -0.48
SMG1-209ENST00000563836 APBB1O00213 710 aa12.07□□□□□ -0.48
SMG1-209ENST00000563836 MCM6Q14566 821 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms