RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 PNNQ9H307 717 aaKnown RBP29■■■□□ 2.23
LINC01960-201ENST00000563759 ZBTB7CA1YPR0 619 aa29■■■□□ 2.23
LINC01960-201ENST00000563759 MAPK8IP3Q9UPT6 1336 aa28.99■■■□□ 2.23
LINC01960-201ENST00000563759 AHDC1Q5TGY3 1603 aaPredicted RBP28.98■■■□□ 2.23
LINC01960-201ENST00000563759 ABCA3Q99758 1704 aa28.98■■■□□ 2.23
LINC01960-201ENST00000563759 FCHSD2O94868 740 aa28.97■■■□□ 2.23
LINC01960-201ENST00000563759 HMOX1P09601 288 aa28.97■■■□□ 2.23
LINC01960-201ENST00000563759 RGPD5Q99666 1765 aa28.97■■■□□ 2.23
LINC01960-201ENST00000563759 TCP11L2Q8N4U5 519 aa28.96■■■□□ 2.23
LINC01960-201ENST00000563759 NGEFQ8N5V2 710 aa28.96■■■□□ 2.23
LINC01960-201ENST00000563759 PLEKHF1Q96S99 279 aa28.95■■■□□ 2.23
LINC01960-201ENST00000563759 RSPH6AQ9H0K4 717 aa28.95■■■□□ 2.23
LINC01960-201ENST00000563759 NEFMP07197 916 aa28.94■■■□□ 2.22
LINC01960-201ENST00000563759 ARHGEF25Q86VW2 580 aa28.94■■■□□ 2.22
LINC01960-201ENST00000563759 IP6K1Q92551 441 aa28.94■■■□□ 2.22
LINC01960-201ENST00000563759 PRKAR2BP31323 418 aa28.93■■■□□ 2.22
LINC01960-201ENST00000563759 PDE3BQ13370 1112 aa28.93■■■□□ 2.22
LINC01960-201ENST00000563759 PHLPP1O60346 1717 aa28.93■■■□□ 2.22
LINC01960-201ENST00000563759 TOM1O60784 492 aa28.92■■■□□ 2.22
LINC01960-201ENST00000563759 CABLES1Q8TDN4 633 aa28.92■■■□□ 2.22
LINC01960-201ENST00000563759 RRP7AQ9Y3A4 280 aaKnown RBP28.91■■■□□ 2.22
LINC01960-201ENST00000563759 NEUROD2Q15784 382 aa28.91■■■□□ 2.22
LINC01960-201ENST00000563759 RGPD2P0DJD1 1756 aa28.91■■■□□ 2.22
LINC01960-201ENST00000563759 ZC3H6P61129 1189 aaKnown RBP28.9■■■□□ 2.22
LINC01960-201ENST00000563759 SULT6B1Q6IMI4 303 aa28.89■■■□□ 2.22
LINC01960-201ENST00000563759 LTV1Q96GA3 475 aaPredicted RBP28.89■■■□□ 2.22
LINC01960-201ENST00000563759 DLG5Q8TDM6 1919 aa28.89■■■□□ 2.22
LINC01960-201ENST00000563759 ZNF521Q96K83 1311 aa28.88■■■□□ 2.21
LINC01960-201ENST00000563759 IGSF1Q8N6C5 1336 aa28.87■■■□□ 2.21
LINC01960-201ENST00000563759 COL18A1P39060 1754 aa28.87■■■□□ 2.21
LINC01960-201ENST00000563759 AEBP1Q8IUX7 1158 aa28.87■■■□□ 2.21
LINC01960-201ENST00000563759 ABCC6O95255 1503 aa28.86■■■□□ 2.21
LINC01960-201ENST00000563759 HAP1P54257 671 aaPredicted RBP28.85■■■□□ 2.21
LINC01960-201ENST00000563759 TMPOP42166 694 aaKnown RBP28.85■■■□□ 2.21
LINC01960-201ENST00000563759 PIP4K2BP78356 416 aa28.85■■■□□ 2.21
LINC01960-201ENST00000563759 EYA1Q99502 592 aa28.85■■■□□ 2.21
LINC01960-201ENST00000563759 CDCA7LQ96GN5 454 aa28.84■■■□□ 2.21
LINC01960-201ENST00000563759 COL16A1Q07092 1604 aaPredicted RBP28.83■■■□□ 2.21
LINC01960-201ENST00000563759 GOLGA2Q08379 1002 aa28.83■■■□□ 2.21
LINC01960-201ENST00000563759 WWC1Q8IX03 1113 aa28.83■■■□□ 2.21
LINC01960-201ENST00000563759 LRRC59Q96AG4 307 aaKnown RBP28.83■■■□□ 2.21
LINC01960-201ENST00000563759 CPDO75976 1380 aa28.83■■■□□ 2.21
LINC01960-201ENST00000563759 KDRP35968 1356 aa28.83■■■□□ 2.21
LINC01960-201ENST00000563759 UBAP1LF5GYI3 381 aa28.83■■■□□ 2.2
LINC01960-201ENST00000563759 NCBP3Q53F19 620 aaKnown RBP28.83■■■□□ 2.2
LINC01960-201ENST00000563759 KIAA0232Q92628 1395 aa28.82■■■□□ 2.2
LINC01960-201ENST00000563759 CCDC27Q2M243 656 aa28.82■■■□□ 2.2
LINC01960-201ENST00000563759 COL22A1Q8NFW1 1626 aaPredicted RBP28.82■■■□□ 2.2
LINC01960-201ENST00000563759 FAM208AQ9UK61 1670 aaKnown RBP28.82■■■□□ 2.2
LINC01960-201ENST00000563759 PHACTR3Q96KR7 559 aa28.81■■■□□ 2.2
LINC01960-201ENST00000563759 CAMTA1Q9Y6Y1 1673 aa28.79■■■□□ 2.2
LINC01960-201ENST00000563759 RIPK4P57078 832 aa28.78■■■□□ 2.2
LINC01960-201ENST00000563759 ANKRD24Q8TF21 1146 aa28.78■■■□□ 2.2
LINC01960-201ENST00000563759 PHF23Q9BUL5 403 aaPredicted RBP28.78■■■□□ 2.2
LINC01960-201ENST00000563759 AXIN2Q9Y2T1 843 aa28.78■■■□□ 2.2
LINC01960-201ENST00000563759 NFE2L2Q16236 605 aa28.78■■■□□ 2.2
LINC01960-201ENST00000563759 CHRNA2Q15822 529 aa28.76■■■□□ 2.19
LINC01960-201ENST00000563759 ERBB3P21860 1342 aa28.75■■■□□ 2.19
LINC01960-201ENST00000563759 CERKQ8TCT0 537 aa28.75■■■□□ 2.19
LINC01960-201ENST00000563759 PRDM11Q9NQV5 511 aa28.75■■■□□ 2.19
LINC01960-201ENST00000563759 LMO7Q8WWI1 1683 aa28.75■■■□□ 2.19
LINC01960-201ENST00000563759 USHBP1Q8N6Y0 703 aa28.74■■■□□ 2.19
LINC01960-201ENST00000563759 E9PSI1 815 aa28.73■■■□□ 2.19
LINC01960-201ENST00000563759 NBPF6Q5VWK0 638 aa28.73■■■□□ 2.19
LINC01960-201ENST00000563759 WDR63Q8IWG1 891 aa28.73■■■□□ 2.19
LINC01960-201ENST00000563759 NBPF4Q96M43 638 aa28.73■■■□□ 2.19
LINC01960-201ENST00000563759 SLFN5Q08AF3 891 aa28.72■■■□□ 2.19
LINC01960-201ENST00000563759 TRIM35Q9UPQ4 493 aa28.72■■■□□ 2.19
LINC01960-201ENST00000563759 DUSP27Q5VZP5 1158 aa28.7■■■□□ 2.18
LINC01960-201ENST00000563759 SPINK5Q9NQ38 1064 aaPredicted RBP28.7■■■□□ 2.18
LINC01960-201ENST00000563759 NCAPD2Q15021 1401 aa28.69■■■□□ 2.18
LINC01960-201ENST00000563759 LMOD3Q0VAK6 560 aa28.69■■■□□ 2.18
LINC01960-201ENST00000563759 GTF3C3Q9Y5Q9 886 aa28.69■■■□□ 2.18
LINC01960-201ENST00000563759 SUPT16HQ9Y5B9 1047 aaKnown RBP28.68■■■□□ 2.18
LINC01960-201ENST00000563759 CSB-PGBD3P0DP91 1061 aa28.67■■■□□ 2.18
LINC01960-201ENST00000563759 COL14A1Q05707 1796 aaKnown RBP28.66■■■□□ 2.18
LINC01960-201ENST00000563759 TRMT2AQ8IZ69 625 aaKnown RBP28.65■■■□□ 2.18
LINC01960-201ENST00000563759 GAS2L2Q8NHY3 880 aa28.64■■■□□ 2.18
LINC01960-201ENST00000563759 NLRP2Q9NX02 1062 aa28.64■■■□□ 2.18
LINC01960-201ENST00000563759 COL5A2P05997 1499 aaPredicted RBP28.64■■■□□ 2.17
LINC01960-201ENST00000563759 MTHFSDQ2M296 383 aaKnown RBP28.63■■■□□ 2.17
LINC01960-201ENST00000563759 MYH16Q9H6N6 1097 aa28.63■■■□□ 2.17
LINC01960-201ENST00000563759 IL16Q14005 1332 aa28.62■■■□□ 2.17
LINC01960-201ENST00000563759 CALD1Q05682 793 aaKnown RBP28.61■■■□□ 2.17
LINC01960-201ENST00000563759 NEFLP07196 543 aa28.61■■■□□ 2.17
LINC01960-201ENST00000563759 RCAN3Q9UKA8 241 aa28.6■■■□□ 2.17
LINC01960-201ENST00000563759 VIRMAQ69YN4 1812 aaKnown RBP28.59■■■□□ 2.17
LINC01960-201ENST00000563759 PLCH1Q4KWH8 1693 aa28.59■■■□□ 2.17
LINC01960-201ENST00000563759 FAM83GA6ND36 823 aa28.59■■■□□ 2.17
LINC01960-201ENST00000563759 THUMPD2Q9BTF0 503 aaKnown RBP28.59■■■□□ 2.17
LINC01960-201ENST00000563759 WDR17Q8IZU2 1322 aa28.58■■■□□ 2.16
LINC01960-201ENST00000563759 RTF1Q92541 710 aaKnown RBP28.56■■■□□ 2.16
LINC01960-201ENST00000563759 DCTN1Q14203 1278 aa28.55■■■□□ 2.16
LINC01960-201ENST00000563759 PARP4Q9UKK3 1724 aaKnown RBP28.55■■■□□ 2.16
LINC01960-201ENST00000563759 FANCIQ9NVI1 1328 aa28.55■■■□□ 2.16
LINC01960-201ENST00000563759 MAP3K5Q99683 1374 aa28.54■■■□□ 2.16
LINC01960-201ENST00000563759 LRRC37A3O60309 1634 aa28.54■■■□□ 2.16
LINC01960-201ENST00000563759 RAPGEF4Q8WZA2 1011 aa28.54■■■□□ 2.16
LINC01960-201ENST00000563759 TOM1L2Q6ZVM7 507 aa28.53■■■□□ 2.16
LINC01960-201ENST00000563759 MCM10Q7L590 875 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms