RNA–Protein interactions for RNA: ENST00000563513.1

FANCA-212, Transcript of FA complementation group A, humanhuman

TSL 4

Gene FANCA, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-212ENST00000563513 PPM1GO15355 546 aaPredicted RBP25.33■■□□□ 1.65
FANCA-212ENST00000563513 FNBP4Q8N3X1 1017 aaPredicted RBP25.33■■□□□ 1.65
FANCA-212ENST00000563513 COL14A1Q05707 1796 aaKnown RBP25.33■■□□□ 1.65
FANCA-212ENST00000563513 CAMTA1Q9Y6Y1 1673 aa25.32■■□□□ 1.64
FANCA-212ENST00000563513 HSP90AB2PQ58FF8 381 aa25.32■■□□□ 1.64
FANCA-212ENST00000563513 MEX3CQ5U5Q3 659 aaKnown RBP25.32■■□□□ 1.64
FANCA-212ENST00000563513 NGLY1Q96IV0 654 aa25.32■■□□□ 1.64
FANCA-212ENST00000563513 SLIT2O94813 1529 aa25.32■■□□□ 1.64
FANCA-212ENST00000563513 BTG4Q9NY30 223 aa25.31■■□□□ 1.64
FANCA-212ENST00000563513 MYBBP1AQ9BQG0 1328 aaKnown RBP25.31■■□□□ 1.64
FANCA-212ENST00000563513 RTL1A6NKG5 1358 aa25.31■■□□□ 1.64
FANCA-212ENST00000563513 FLT4P35916 1363 aa25.31■■□□□ 1.64
FANCA-212ENST00000563513 ABCC6O95255 1503 aa25.29■■□□□ 1.64
FANCA-212ENST00000563513 INSRP06213 1382 aa25.28■■□□□ 1.64
FANCA-212ENST00000563513 RGPD5Q99666 1765 aa25.28■■□□□ 1.64
FANCA-212ENST00000563513 BCL9LQ86UU0 1499 aa25.28■■□□□ 1.64
FANCA-212ENST00000563513 BLMP54132 1417 aaPredicted RBP25.27■■□□□ 1.64
FANCA-212ENST00000563513 CDK12Q9NYV4 1490 aaPredicted RBP25.27■■□□□ 1.64
FANCA-212ENST00000563513 PLCH1Q4KWH8 1693 aa25.26■■□□□ 1.63
FANCA-212ENST00000563513 AFF2P51816 1311 aa25.26■■□□□ 1.63
FANCA-212ENST00000563513 COL5A2P05997 1499 aaPredicted RBP25.25■■□□□ 1.63
FANCA-212ENST00000563513 ANKRD24Q8TF21 1146 aa25.24■■□□□ 1.63
FANCA-212ENST00000563513 NWD2Q9ULI1 1742 aa25.23■■□□□ 1.63
FANCA-212ENST00000563513 ERBB3P21860 1342 aa25.23■■□□□ 1.63
FANCA-212ENST00000563513 UNC5CLQ8IV45 518 aa25.23■■□□□ 1.63
FANCA-212ENST00000563513 USP21Q9UK80 565 aa25.23■■□□□ 1.63
FANCA-212ENST00000563513 COL3A1P02461 1466 aaPredicted RBP25.22■■□□□ 1.63
FANCA-212ENST00000563513 EIF4A2Q14240 407 aaKnown RBP25.22■■□□□ 1.63
FANCA-212ENST00000563513 CCDC184Q52MB2 194 aa25.22■■□□□ 1.63
FANCA-212ENST00000563513 LTV1Q96GA3 475 aaPredicted RBP25.22■■□□□ 1.63
FANCA-212ENST00000563513 STRN4Q9NRL3 753 aa25.22■■□□□ 1.63
FANCA-212ENST00000563513 NRAPQ86VF7 1730 aa25.22■■□□□ 1.63
FANCA-212ENST00000563513 IL13P35225 146 aa25.21■■□□□ 1.63
FANCA-212ENST00000563513 LARP1Q6PKG0 1096 aaKnown RBP25.21■■□□□ 1.63
FANCA-212ENST00000563513 EVA1CP58658 441 aa25.2■■□□□ 1.62
FANCA-212ENST00000563513 MIER1Q8N108 512 aa25.2■■□□□ 1.62
FANCA-212ENST00000563513 RGS17Q9UGC6 210 aaPredicted RBP25.2■■□□□ 1.62
FANCA-212ENST00000563513 WDR17Q8IZU2 1322 aa25.19■■□□□ 1.62
FANCA-212ENST00000563513 DIAPH1O60610 1272 aaKnown RBP25.17■■□□□ 1.62
FANCA-212ENST00000563513 NBPF6Q5VWK0 638 aa25.17■■□□□ 1.62
FANCA-212ENST00000563513 NBPF4Q96M43 638 aa25.17■■□□□ 1.62
FANCA-212ENST00000563513 CFAP53Q96M91 514 aa25.17■■□□□ 1.62
FANCA-212ENST00000563513 VPS72Q15906 364 aa25.16■■□□□ 1.62
FANCA-212ENST00000563513 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.15■■□□□ 1.62
FANCA-212ENST00000563513 CSB-PGBD3P0DP91 1061 aa25.15■■□□□ 1.62
FANCA-212ENST00000563513 EYA1Q99502 592 aa25.15■■□□□ 1.62
FANCA-212ENST00000563513 ATRNO75882 1429 aa25.13■■□□□ 1.61
FANCA-212ENST00000563513 ZNF772Q68DY9 489 aaPredicted RBP25.13■■□□□ 1.61
FANCA-212ENST00000563513 TOM1L2Q6ZVM7 507 aa25.13■■□□□ 1.61
FANCA-212ENST00000563513 CARD10Q9BWT7 1032 aa25.13■■□□□ 1.61
FANCA-212ENST00000563513 QTRT2Q9H974 415 aaKnown RBP25.13■■□□□ 1.61
FANCA-212ENST00000563513 NLRP2Q9NX02 1062 aa25.13■■□□□ 1.61
FANCA-212ENST00000563513 RGPD2P0DJD1 1756 aa25.13■■□□□ 1.61
FANCA-212ENST00000563513 SPATA31A5Q5VU36 1347 aa25.12■■□□□ 1.61
FANCA-212ENST00000563513 SPATA31A7Q8IWB4 1347 aa25.12■■□□□ 1.61
FANCA-212ENST00000563513 CRB1P82279 1406 aa25.12■■□□□ 1.61
FANCA-212ENST00000563513 SPATA31A1Q5TZJ5 1347 aa25.12■■□□□ 1.61
FANCA-212ENST00000563513 TRPC5Q9UL62 973 aaPredicted RBP25.11■■□□□ 1.61
FANCA-212ENST00000563513 IGSF1Q8N6C5 1336 aa25.11■■□□□ 1.61
FANCA-212ENST00000563513 USHBP1Q8N6Y0 703 aa25.1■■□□□ 1.61
FANCA-212ENST00000563513 RGPD1P0DJD0 1748 aa25.09■■□□□ 1.61
FANCA-212ENST00000563513 NCAPD2Q15021 1401 aa25.09■■□□□ 1.61
FANCA-212ENST00000563513 CCER2I3L3R5 266 aa25.08■■□□□ 1.61
FANCA-212ENST00000563513 GJD4Q96KN9 370 aaPredicted RBP25.08■■□□□ 1.61
FANCA-212ENST00000563513 MRS2Q9HD23 443 aa25.08■■□□□ 1.61
FANCA-212ENST00000563513 USP35Q9P2H5 1018 aa25.08■■□□□ 1.61
FANCA-212ENST00000563513 FAM208AQ9UK61 1670 aaKnown RBP25.07■■□□□ 1.6
FANCA-212ENST00000563513 POTEAQ6S8J7 498 aa25.07■■□□□ 1.6
FANCA-212ENST00000563513 PHF23Q9BUL5 403 aaPredicted RBP25.07■■□□□ 1.6
FANCA-212ENST00000563513 CCDC9Q9Y3X0 531 aaKnown RBP25.07■■□□□ 1.6
FANCA-212ENST00000563513 U2SURPO15042 1029 aaKnown RBP25.06■■□□□ 1.6
FANCA-212ENST00000563513 AEBP1Q8IUX7 1158 aa25.06■■□□□ 1.6
FANCA-212ENST00000563513 NUDCQ9Y266 331 aa25.06■■□□□ 1.6
FANCA-212ENST00000563513 TCP11L2Q8N4U5 519 aa25.05■■□□□ 1.6
FANCA-212ENST00000563513 PNISRQ8TF01 805 aaKnown RBP25.05■■□□□ 1.6
FANCA-212ENST00000563513 GLI3P10071 1580 aa25.05■■□□□ 1.6
FANCA-212ENST00000563513 SULT6B1Q6IMI4 303 aa25.04■■□□□ 1.6
FANCA-212ENST00000563513 THRAP3Q9Y2W1 955 aaKnown RBP25.04■■□□□ 1.6
FANCA-212ENST00000563513 KDRP35968 1356 aa25.03■■□□□ 1.6
FANCA-212ENST00000563513 HMOX1P09601 288 aa25.02■■□□□ 1.6
FANCA-212ENST00000563513 U2AF1L5P0DN76 240 aaPredicted RBP25.02■■□□□ 1.6
FANCA-212ENST00000563513 U2AF1Q01081 240 aaKnown RBP eCLIP25.02■■□□□ 1.64e-8■□□□□ 8.8
FANCA-212ENST00000563513 BARGINQ6ZT62 677 aa25.02■■□□□ 1.6
FANCA-212ENST00000563513 ONECUT3O60422 494 aaPredicted RBP25.01■■□□□ 1.59
FANCA-212ENST00000563513 RBM6P78332 1123 aaKnown RBP25■■□□□ 1.59
FANCA-212ENST00000563513 ADAMTS8Q9UP79 889 aa25■■□□□ 1.59
FANCA-212ENST00000563513 DISP2A7MBM2 1401 aa25■■□□□ 1.59
FANCA-212ENST00000563513 FAM98CQ17RN3 349 aaKnown RBP24.99■■□□□ 1.59
FANCA-212ENST00000563513 RSPH6AQ9H0K4 717 aa24.99■■□□□ 1.59
FANCA-212ENST00000563513 MEGF6O75095 1541 aa24.97■■□□□ 1.59
FANCA-212ENST00000563513 FCHSD2O94868 740 aa24.97■■□□□ 1.59
FANCA-212ENST00000563513 IL2RBP14784 551 aa24.97■■□□□ 1.59
FANCA-212ENST00000563513 RXRBP28702 533 aa24.96■■□□□ 1.59
FANCA-212ENST00000563513 WDR43Q15061 677 aaKnown RBP eCLIP24.96■■□□□ 1.59
FANCA-212ENST00000563513 RAPGEF4Q8WZA2 1011 aa24.94■■□□□ 1.58
FANCA-212ENST00000563513 PLEKHF1Q96S99 279 aa24.94■■□□□ 1.58
FANCA-212ENST00000563513 CDCA7Q9BWT1 371 aaPredicted RBP24.94■■□□□ 1.58
FANCA-212ENST00000563513 TATP17735 454 aaPredicted RBP24.93■■□□□ 1.58
FANCA-212ENST00000563513 PRKAR2BP31323 418 aa24.93■■□□□ 1.58
FANCA-212ENST00000563513 WNK3Q9BYP7 1800 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms