RNA–Protein interactions for RNA: ENST00000563346.1

TSC2-219, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-219ENST00000563346 AXIN2Q9Y2T1 843 aa24.52■■□□□ 1.52
TSC2-219ENST00000563346 WDR17Q8IZU2 1322 aa24.52■■□□□ 1.52
TSC2-219ENST00000563346 C11orf95C9JLR9 678 aaPredicted RBP24.51■■□□□ 1.51
TSC2-219ENST00000563346 CSB-PGBD3P0DP91 1061 aa24.51■■□□□ 1.51
TSC2-219ENST00000563346 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.51■■□□□ 1.51
TSC2-219ENST00000563346 DDB1Q16531 1140 aa24.5■■□□□ 1.51
TSC2-219ENST00000563346 HDGFL2Q7Z4V5 671 aaPredicted RBP24.49■■□□□ 1.51
TSC2-219ENST00000563346 RGPD5Q99666 1765 aa24.49■■□□□ 1.51
TSC2-219ENST00000563346 OVOS2A0A0G2JMS6 1433 aa24.48■■□□□ 1.51
TSC2-219ENST00000563346 OVOS2A0A0J9YW53 1432 aa24.48■■□□□ 1.51
TSC2-219ENST00000563346 LRRC37A3O60309 1634 aa24.48■■□□□ 1.51
TSC2-219ENST00000563346 OVOS2Q6IE36 1432 aa24.48■■□□□ 1.51
TSC2-219ENST00000563346 NFAT5O94916 1531 aa24.47■■□□□ 1.51
TSC2-219ENST00000563346 CDCA7Q9BWT1 371 aaPredicted RBP24.47■■□□□ 1.51
TSC2-219ENST00000563346 WNK3Q9BYP7 1800 aa24.46■■□□□ 1.51
TSC2-219ENST00000563346 TRIM26Q12899 539 aaPredicted RBP24.45■■□□□ 1.5
TSC2-219ENST00000563346 SLC12A5Q9H2X9 1139 aa24.45■■□□□ 1.5
TSC2-219ENST00000563346 CD163L1Q9NR16 1453 aa24.45■■□□□ 1.5
TSC2-219ENST00000563346 USP31Q70CQ4 1352 aa24.44■■□□□ 1.5
TSC2-219ENST00000563346 RREB1Q92766 1687 aa24.44■■□□□ 1.5
TSC2-219ENST00000563346 NME9Q86XW9 330 aa24.44■■□□□ 1.5
TSC2-219ENST00000563346 CARD10Q9BWT7 1032 aa24.44■■□□□ 1.5
TSC2-219ENST00000563346 TERF2IPQ9NYB0 399 aa24.44■■□□□ 1.5
TSC2-219ENST00000563346 NBPF14Q5TI25 921 aa24.43■■□□□ 1.5
TSC2-219ENST00000563346 PEAK1Q9H792 1746 aa24.43■■□□□ 1.5
TSC2-219ENST00000563346 ABCC6O95255 1503 aa24.42■■□□□ 1.5
TSC2-219ENST00000563346 NUP188Q5SRE5 1749 aa24.41■■□□□ 1.5
TSC2-219ENST00000563346 USP54Q70EL1 1684 aa24.41■■□□□ 1.5
TSC2-219ENST00000563346 PUS7Q96PZ0 661 aaKnown RBP24.41■■□□□ 1.5
TSC2-219ENST00000563346 EDC4Q6P2E9 1401 aaKnown RBP24.41■■□□□ 1.5
TSC2-219ENST00000563346 CCDC7Q96M83 1385 aa24.4■■□□□ 1.5
TSC2-219ENST00000563346 SBF2Q86WG5 1849 aa24.39■■□□□ 1.49
TSC2-219ENST00000563346 A0A1W2PP64 1363 aa24.39■■□□□ 1.49
TSC2-219ENST00000563346 ST20-MTHFSA0A0A6YYL1 179 aa24.38■■□□□ 1.49
TSC2-219ENST00000563346 MARCH10Q8NA82 808 aaPredicted RBP24.38■■□□□ 1.49
TSC2-219ENST00000563346 LTN1O94822 1766 aa24.38■■□□□ 1.49
TSC2-219ENST00000563346 EXOC5O00471 708 aa24.37■■□□□ 1.49
TSC2-219ENST00000563346 SLC24A1O60721 1099 aa24.37■■□□□ 1.49
TSC2-219ENST00000563346 BCL11BQ9C0K0 894 aaPredicted RBP24.36■■□□□ 1.49
TSC2-219ENST00000563346 NINLQ9Y2I6 1382 aa24.35■■□□□ 1.49
TSC2-219ENST00000563346 TESK2Q96S53 571 aa24.35■■□□□ 1.49
TSC2-219ENST00000563346 NLRP2Q9NX02 1062 aa24.35■■□□□ 1.49
TSC2-219ENST00000563346 ERBB3P21860 1342 aa24.35■■□□□ 1.49
TSC2-219ENST00000563346 PLSCR1O15162 318 aa24.34■■□□□ 1.49
TSC2-219ENST00000563346 RGPD3A6NKT7 1758 aaPredicted RBP24.34■■□□□ 1.49
TSC2-219ENST00000563346 RGPD4Q7Z3J3 1758 aa24.34■■□□□ 1.49
TSC2-219ENST00000563346 BCL9O00512 1426 aa24.32■■□□□ 1.48
TSC2-219ENST00000563346 TNS2Q63HR2 1409 aa24.31■■□□□ 1.48
TSC2-219ENST00000563346 PTF1AQ7RTS3 328 aa24.31■■□□□ 1.48
TSC2-219ENST00000563346 ANKRD24Q8TF21 1146 aa24.31■■□□□ 1.48
TSC2-219ENST00000563346 YY1P25490 414 aa24.3■■□□□ 1.48
TSC2-219ENST00000563346 IL2RBP14784 551 aa24.28■■□□□ 1.48
TSC2-219ENST00000563346 COG3Q96JB2 828 aa24.28■■□□□ 1.48
TSC2-219ENST00000563346 TMF1P82094 1093 aa24.27■■□□□ 1.48
TSC2-219ENST00000563346 PPP1R1BQ9UD71 204 aaPredicted RBP24.27■■□□□ 1.48
TSC2-219ENST00000563346 USP47Q96K76 1375 aa24.26■■□□□ 1.47
TSC2-219ENST00000563346 IP6K1Q92551 441 aa24.25■■□□□ 1.47
TSC2-219ENST00000563346 LTV1Q96GA3 475 aaPredicted RBP24.24■■□□□ 1.47
TSC2-219ENST00000563346 ANKRD36BQ8N2N9 1353 aa24.24■■□□□ 1.47
TSC2-219ENST00000563346 SPON1Q9HCB6 807 aa24.23■■□□□ 1.47
TSC2-219ENST00000563346 ACSBG1Q96GR2 724 aa24.22■■□□□ 1.47
TSC2-219ENST00000563346 KCNQ2O43526 872 aa24.21■■□□□ 1.47
TSC2-219ENST00000563346 AMPHP49418 695 aa24.21■■□□□ 1.47
TSC2-219ENST00000563346 TXNRD1Q16881 649 aa24.21■■□□□ 1.47
TSC2-219ENST00000563346 PROM2Q8N271 834 aa24.21■■□□□ 1.47
TSC2-219ENST00000563346 ANO8Q9HCE9 1232 aaPredicted RBP24.21■■□□□ 1.47
TSC2-219ENST00000563346 NHSQ6T4R5 1651 aa24.21■■□□□ 1.47
TSC2-219ENST00000563346 FAM208AQ9UK61 1670 aaKnown RBP24.21■■□□□ 1.47
TSC2-219ENST00000563346 MAP3K19Q56UN5 1328 aa24.19■■□□□ 1.46
TSC2-219ENST00000563346 CDCA8Q53HL2 280 aa24.19■■□□□ 1.46
TSC2-219ENST00000563346 STK32BQ9NY57 414 aa24.18■■□□□ 1.46
TSC2-219ENST00000563346 HOXC9P31274 260 aa24.17■■□□□ 1.46
TSC2-219ENST00000563346 FBLN1P23142 703 aa24.16■■□□□ 1.46
TSC2-219ENST00000563346 DDX54Q8TDD1 881 aaKnown RBP24.15■■□□□ 1.46
TSC2-219ENST00000563346 GGNBP2Q9H3C7 697 aa24.15■■□□□ 1.46
TSC2-219ENST00000563346 DCAF8L1A6NGE4 600 aa24.14■■□□□ 1.45
TSC2-219ENST00000563346 CASZ1Q86V15 1759 aa24.14■■□□□ 1.45
TSC2-219ENST00000563346 FYB1O15117 783 aa24.13■■□□□ 1.45
TSC2-219ENST00000563346 PCGF6Q9BYE7 350 aa24.13■■□□□ 1.45
TSC2-219ENST00000563346 TIMELESSQ9UNS1 1208 aa24.13■■□□□ 1.45
TSC2-219ENST00000563346 RRS1Q15050 365 aaKnown RBP24.12■■□□□ 1.45
TSC2-219ENST00000563346 SLC15A2Q16348 729 aa24.12■■□□□ 1.45
TSC2-219ENST00000563346 RTL1A6NKG5 1358 aa24.12■■□□□ 1.45
TSC2-219ENST00000563346 KAT6BQ8WYB5 2073 aa24.12■■□□□ 1.45
TSC2-219ENST00000563346 BTAF1O14981 1849 aa24.12■■□□□ 1.45
TSC2-219ENST00000563346 KIF20BQ96Q89 1820 aa24.1■■□□□ 1.45
TSC2-219ENST00000563346 ZBTB7AO95365 584 aa24.1■■□□□ 1.45
TSC2-219ENST00000563346 PDGFDQ9GZP0 370 aaPredicted RBP24.1■■□□□ 1.45
TSC2-219ENST00000563346 RGPD2P0DJD1 1756 aa24.09■■□□□ 1.45
TSC2-219ENST00000563346 SMG6Q86US8 1419 aaKnown RBP24.08■■□□□ 1.44
TSC2-219ENST00000563346 CLSPNQ9HAW4 1339 aa24.08■■□□□ 1.44
TSC2-219ENST00000563346 ZCRB1Q8TBF4 217 aaKnown RBP24.06■■□□□ 1.44
TSC2-219ENST00000563346 SYTL4Q96C24 671 aaPredicted RBP24.06■■□□□ 1.44
TSC2-219ENST00000563346 ATF5Q9Y2D1 282 aaPredicted RBP24.06■■□□□ 1.44
TSC2-219ENST00000563346 NBPF6Q5VWK0 638 aa24.04■■□□□ 1.44
TSC2-219ENST00000563346 NBPF4Q96M43 638 aa24.04■■□□□ 1.44
TSC2-219ENST00000563346 MEGF6O75095 1541 aa24.04■■□□□ 1.44
TSC2-219ENST00000563346 MYOM1P52179 1685 aa24.03■■□□□ 1.44
TSC2-219ENST00000563346 NSD3Q9BZ95 1437 aa24.02■■□□□ 1.44
TSC2-219ENST00000563346 USHBP1Q8N6Y0 703 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms