RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 C11orf95C9JLR9 678 aaPredicted RBP11.6□□□□□ -0.55
HERPUD1-206ENST00000563343 EVA1CP58658 441 aa11.6□□□□□ -0.55
HERPUD1-206ENST00000563343 MPHOSPH9Q99550 1183 aa11.6□□□□□ -0.55
HERPUD1-206ENST00000563343 QSER1Q2KHR3 1735 aa11.6□□□□□ -0.55
HERPUD1-206ENST00000563343 BCL9O00512 1426 aa11.6□□□□□ -0.55
HERPUD1-206ENST00000563343 CRB1P82279 1406 aa11.6□□□□□ -0.55
HERPUD1-206ENST00000563343 USP19O94966 1318 aa11.6□□□□□ -0.55
HERPUD1-206ENST00000563343 NUTM2GQ5VZR2 741 aa11.59□□□□□ -0.55
HERPUD1-206ENST00000563343 TRAK1Q9UPV9 953 aa11.59□□□□□ -0.55
HERPUD1-206ENST00000563343 ATF5Q9Y2D1 282 aaPredicted RBP11.59□□□□□ -0.55
HERPUD1-206ENST00000563343 NHSQ6T4R5 1651 aa11.59□□□□□ -0.55
HERPUD1-206ENST00000563343 MAP3K5Q99683 1374 aa11.58□□□□□ -0.56
HERPUD1-206ENST00000563343 BCL11BQ9C0K0 894 aaPredicted RBP11.58□□□□□ -0.56
HERPUD1-206ENST00000563343 AATKQ6ZMQ8 1374 aa11.57□□□□□ -0.56
HERPUD1-206ENST00000563343 NUDT16Q96DE0 195 aaKnown RBP11.57□□□□□ -0.56
HERPUD1-206ENST00000563343 TUBGCP6Q96RT7 1819 aa11.57□□□□□ -0.56
HERPUD1-206ENST00000563343 GOLGB1Q14789 3259 aaKnown RBP11.56□□□□□ -0.56
HERPUD1-206ENST00000563343 ACEP12821 1306 aa11.56□□□□□ -0.56
HERPUD1-206ENST00000563343 SLIT3O75094 1523 aa11.55□□□□□ -0.56
HERPUD1-206ENST00000563343 SLC15A2Q16348 729 aa11.55□□□□□ -0.56
HERPUD1-206ENST00000563343 MTFR1LQ9H019 292 aa11.55□□□□□ -0.56
HERPUD1-206ENST00000563343 BTAF1O14981 1849 aa11.55□□□□□ -0.56
HERPUD1-206ENST00000563343 TXNRD1Q16881 649 aa11.54□□□□□ -0.56
HERPUD1-206ENST00000563343 MARCH10Q8NA82 808 aaPredicted RBP11.54□□□□□ -0.56
HERPUD1-206ENST00000563343 PIK3C2AO00443 1686 aa11.53□□□□□ -0.56
HERPUD1-206ENST00000563343 GIGYF1O75420 1035 aaPredicted RBP11.53□□□□□ -0.56
HERPUD1-206ENST00000563343 GCP02774 474 aa11.53□□□□□ -0.56
HERPUD1-206ENST00000563343 DDB1Q16531 1140 aa11.53□□□□□ -0.56
HERPUD1-206ENST00000563343 PLEKHG3A1L390 1219 aa11.52□□□□□ -0.57
HERPUD1-206ENST00000563343 ABTB2Q8N961 1025 aa11.52□□□□□ -0.57
HERPUD1-206ENST00000563343 ARXQ96QS3 562 aa11.52□□□□□ -0.57
HERPUD1-206ENST00000563343 STK32BQ9NY57 414 aa11.52□□□□□ -0.57
HERPUD1-206ENST00000563343 TRPM1Q7Z4N2 1603 aa11.52□□□□□ -0.57
HERPUD1-206ENST00000563343 CDK19Q9BWU1 502 aa11.5□□□□□ -0.57
HERPUD1-206ENST00000563343 CCDC61Q9Y6R9 512 aa11.5□□□□□ -0.57
HERPUD1-206ENST00000563343 KIAA1210Q9ULL0 1709 aa11.49□□□□□ -0.57
HERPUD1-206ENST00000563343 NLRP13Q86W25 1043 aa11.49□□□□□ -0.57
HERPUD1-206ENST00000563343 WDR17Q8IZU2 1322 aa11.49□□□□□ -0.57
HERPUD1-206ENST00000563343 QRICH2Q9H0J4 1663 aa11.49□□□□□ -0.57
HERPUD1-206ENST00000563343 AXIN2Q9Y2T1 843 aa11.48□□□□□ -0.57
HERPUD1-206ENST00000563343 ABCC6O95255 1503 aa11.47□□□□□ -0.57
HERPUD1-206ENST00000563343 TNS2Q63HR2 1409 aa11.47□□□□□ -0.57
HERPUD1-206ENST00000563343 BRD4O60885 1362 aaPredicted RBP11.47□□□□□ -0.57
HERPUD1-206ENST00000563343 KAT6BQ8WYB5 2073 aa11.47□□□□□ -0.57
HERPUD1-206ENST00000563343 LY75O60449 1722 aa11.46□□□□□ -0.57
HERPUD1-206ENST00000563343 CPSF1Q10570 1443 aaKnown RBP11.46□□□□□ -0.57
HERPUD1-206ENST00000563343 PPIP5K1Q6PFW1 1433 aa11.46□□□□□ -0.57
HERPUD1-206ENST00000563343 GPR162Q16538 588 aa11.46□□□□□ -0.57
HERPUD1-206ENST00000563343 ZNF827Q17R98 1081 aa11.46□□□□□ -0.57
HERPUD1-206ENST00000563343 TOM1L2Q6ZVM7 507 aa11.46□□□□□ -0.57
HERPUD1-206ENST00000563343 USP6P35125 1406 aa11.45□□□□□ -0.58
HERPUD1-206ENST00000563343 CDCA7Q9BWT1 371 aaPredicted RBP11.45□□□□□ -0.58
HERPUD1-206ENST00000563343 NFAT5O94916 1531 aa11.45□□□□□ -0.58
HERPUD1-206ENST00000563343 CARD10Q9BWT7 1032 aa11.44□□□□□ -0.58
HERPUD1-206ENST00000563343 KDM2AQ9Y2K7 1162 aa11.44□□□□□ -0.58
HERPUD1-206ENST00000563343 NLGN2Q8NFZ4 835 aa11.43□□□□□ -0.58
HERPUD1-206ENST00000563343 DCAF11Q8TEB1 546 aa11.43□□□□□ -0.58
HERPUD1-206ENST00000563343 LRRC4BQ9NT99 713 aa11.43□□□□□ -0.58
HERPUD1-206ENST00000563343 ATP10DQ9P241 1426 aa11.43□□□□□ -0.58
HERPUD1-206ENST00000563343 USP54Q70EL1 1684 aa11.43□□□□□ -0.58
HERPUD1-206ENST00000563343 LTN1O94822 1766 aa11.42□□□□□ -0.58
HERPUD1-206ENST00000563343 ZBTB7CA1YPR0 619 aa11.42□□□□□ -0.58
HERPUD1-206ENST00000563343 YBX3P16989 372 aaKnown RBP eCLIP11.42□□□□□ -0.58
HERPUD1-206ENST00000563343 SLC16A10Q8TF71 515 aa11.42□□□□□ -0.58
HERPUD1-206ENST00000563343 AKT1S1Q96B36 256 aa11.42□□□□□ -0.58
HERPUD1-206ENST00000563343 EXOC5O00471 708 aa11.41□□□□□ -0.58
HERPUD1-206ENST00000563343 NLRP6P59044 892 aa11.41□□□□□ -0.58
HERPUD1-206ENST00000563343 ARHGEF25Q86VW2 580 aa11.41□□□□□ -0.58
HERPUD1-206ENST00000563343 STAC3Q96MF2 364 aa11.41□□□□□ -0.58
HERPUD1-206ENST00000563343 ADCY9O60503 1353 aa11.41□□□□□ -0.58
HERPUD1-206ENST00000563343 CCDC7Q96M83 1385 aa11.41□□□□□ -0.58
HERPUD1-206ENST00000563343 HSPA6P17066 643 aa11.4□□□□□ -0.58
HERPUD1-206ENST00000563343 ACSBG1Q96GR2 724 aa11.4□□□□□ -0.58
HERPUD1-206ENST00000563343 DOT1LQ8TEK3 1739 aa11.4□□□□□ -0.58
HERPUD1-206ENST00000563343 PNPLA7Q6ZV29 1317 aa11.39□□□□□ -0.59
HERPUD1-206ENST00000563343 MON2Q7Z3U7 1717 aa11.39□□□□□ -0.59
HERPUD1-206ENST00000563343 PELP1Q8IZL8 1130 aaKnown RBP11.39□□□□□ -0.59
HERPUD1-206ENST00000563343 KLHL34Q8N239 644 aa11.38□□□□□ -0.59
HERPUD1-206ENST00000563343 TAF1LQ8IZX4 1826 aa11.37□□□□□ -0.59
HERPUD1-206ENST00000563343 GRIN3BO60391 1043 aa11.37□□□□□ -0.59
HERPUD1-206ENST00000563343 CABP2Q9NPB3 220 aa11.37□□□□□ -0.59
HERPUD1-206ENST00000563343 POLD1P28340 1107 aa11.36□□□□□ -0.59
HERPUD1-206ENST00000563343 CABP1Q9NZU7 370 aa11.36□□□□□ -0.59
HERPUD1-206ENST00000563343 CSB-PGBD3P0DP91 1061 aa11.35□□□□□ -0.59
HERPUD1-206ENST00000563343 SRPK2P78362 688 aaKnown RBP11.35□□□□□ -0.59
HERPUD1-206ENST00000563343 C5P01031 1676 aa11.35□□□□□ -0.59
HERPUD1-206ENST00000563343 FAM208AQ9UK61 1670 aaKnown RBP11.35□□□□□ -0.59
HERPUD1-206ENST00000563343 SLC27A3Q5K4L6 730 aa11.34□□□□□ -0.59
HERPUD1-206ENST00000563343 KCNH5Q8NCM2 988 aa11.34□□□□□ -0.59
HERPUD1-206ENST00000563343 GPBP1L1Q9HC44 474 aaPredicted RBP11.34□□□□□ -0.59
HERPUD1-206ENST00000563343 WDR90Q96KV7 1748 aa11.34□□□□□ -0.59
HERPUD1-206ENST00000563343 ERBB3P21860 1342 aa11.34□□□□□ -0.59
HERPUD1-206ENST00000563343 TTC21BQ7Z4L5 1316 aa11.34□□□□□ -0.59
HERPUD1-206ENST00000563343 RGPD2P0DJD1 1756 aa11.33□□□□□ -0.59
HERPUD1-206ENST00000563343 RAB3GAP2Q9H2M9 1393 aa11.33□□□□□ -0.6
HERPUD1-206ENST00000563343 NBPF1Q3BBV0 1214 aa11.33□□□□□ -0.6
HERPUD1-206ENST00000563343 CENPJQ9HC77 1338 aaPredicted RBP11.33□□□□□ -0.6
HERPUD1-206ENST00000563343 TOGARAM1Q9Y4F4 1720 aa11.32□□□□□ -0.6
HERPUD1-206ENST00000563343 NSD2O96028 1365 aa11.32□□□□□ -0.6
HERPUD1-206ENST00000563343 CICQ96RK0 1608 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms