RNA–Protein interactions for RNA: ENST00000563003.1

AC040174.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC040174.1, Length 2,571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040174.1-201ENST00000563003 PRDM4Q9UKN5 801 aa17.11■□□□□ 0.33
AC040174.1-201ENST00000563003 RIPK4P57078 832 aa17.11■□□□□ 0.33
AC040174.1-201ENST00000563003 NEUROD2Q15784 382 aa17.11■□□□□ 0.33
AC040174.1-201ENST00000563003 RBM10P98175 930 aaKnown RBP17.1■□□□□ 0.33
AC040174.1-201ENST00000563003 PODXL2Q9NZ53 605 aa17.1■□□□□ 0.33
AC040174.1-201ENST00000563003 MED14O60244 1454 aa17.1■□□□□ 0.33
AC040174.1-201ENST00000563003 ATP7BP35670 1465 aa17.1■□□□□ 0.33
AC040174.1-201ENST00000563003 ANKRD26Q9UPS8 1709 aa17.1■□□□□ 0.33
AC040174.1-201ENST00000563003 RAB3GAP1Q15042 981 aa17.09■□□□□ 0.33
AC040174.1-201ENST00000563003 SMC5Q8IY18 1101 aa17.09■□□□□ 0.33
AC040174.1-201ENST00000563003 MTHFSP49914 203 aa17.09■□□□□ 0.33
AC040174.1-201ENST00000563003 CFAP53Q96M91 514 aa17.09■□□□□ 0.33
AC040174.1-201ENST00000563003 CIZ1Q9ULV3 898 aaPredicted RBP17.09■□□□□ 0.33
AC040174.1-201ENST00000563003 NASPP49321 788 aaPredicted RBP17.08■□□□□ 0.33
AC040174.1-201ENST00000563003 SNX21Q969T3 373 aa17.08■□□□□ 0.33
AC040174.1-201ENST00000563003 RRP7AQ9Y3A4 280 aaKnown RBP17.08■□□□□ 0.33
AC040174.1-201ENST00000563003 FYB1O15117 783 aa17.08■□□□□ 0.32
AC040174.1-201ENST00000563003 SHPRHQ149N8 1683 aa17.08■□□□□ 0.32
AC040174.1-201ENST00000563003 MVPQ14764 893 aaKnown RBP17.07■□□□□ 0.32
AC040174.1-201ENST00000563003 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.07■□□□□ 0.32
AC040174.1-201ENST00000563003 ROBO2Q9HCK4 1378 aa17.07■□□□□ 0.32
AC040174.1-201ENST00000563003 TERF1P54274 439 aa17.06■□□□□ 0.32
AC040174.1-201ENST00000563003 GGNBP2Q9H3C7 697 aa17.06■□□□□ 0.32
AC040174.1-201ENST00000563003 KIF20BQ96Q89 1820 aa17.06■□□□□ 0.32
AC040174.1-201ENST00000563003 LMTK3Q96Q04 1460 aa17.06■□□□□ 0.32
AC040174.1-201ENST00000563003 MSNP26038 577 aaKnown RBP17.06■□□□□ 0.32
AC040174.1-201ENST00000563003 RBM25P49756 843 aaKnown RBP17.06■□□□□ 0.32
AC040174.1-201ENST00000563003 TBX22Q9Y458 520 aa17.06■□□□□ 0.32
AC040174.1-201ENST00000563003 HSP90AB1P08238 724 aaKnown RBP17.05■□□□□ 0.32
AC040174.1-201ENST00000563003 PTMSP20962 102 aa17.05■□□□□ 0.32
AC040174.1-201ENST00000563003 PPIP5K1Q6PFW1 1433 aa17.04■□□□□ 0.32
AC040174.1-201ENST00000563003 ANP32BQ92688 251 aaKnown RBP17.04■□□□□ 0.32
AC040174.1-201ENST00000563003 NUDT16Q96DE0 195 aaKnown RBP17.04■□□□□ 0.32
AC040174.1-201ENST00000563003 SLC26A8Q96RN1 970 aa17.04■□□□□ 0.32
AC040174.1-201ENST00000563003 FAM13BQ9NYF5 915 aa17.04■□□□□ 0.32
AC040174.1-201ENST00000563003 CPSF1Q10570 1443 aaKnown RBP17.03■□□□□ 0.32
AC040174.1-201ENST00000563003 CCDC61Q9Y6R9 512 aa17.03■□□□□ 0.32
AC040174.1-201ENST00000563003 DIP2AQ14689 1571 aa17.03■□□□□ 0.32
AC040174.1-201ENST00000563003 R3HCC1Q9Y3T6 440 aaKnown RBP17.03■□□□□ 0.32
AC040174.1-201ENST00000563003 ADGRB2O60241 1585 aa17.03■□□□□ 0.32
AC040174.1-201ENST00000563003 CEP170BQ9Y4F5 1589 aaPredicted RBP17.03■□□□□ 0.32
AC040174.1-201ENST00000563003 TCP11L2Q8N4U5 519 aa17.02■□□□□ 0.32
AC040174.1-201ENST00000563003 MAP7D2Q96T17 732 aa17.02■□□□□ 0.32
AC040174.1-201ENST00000563003 PTPRUQ92729 1446 aa17.02■□□□□ 0.32
AC040174.1-201ENST00000563003 HSPA2P54652 639 aa17.02■□□□□ 0.31
AC040174.1-201ENST00000563003 WDR63Q8IWG1 891 aa17.02■□□□□ 0.31
AC040174.1-201ENST00000563003 PHF23Q9BUL5 403 aaPredicted RBP17.02■□□□□ 0.31
AC040174.1-201ENST00000563003 FOXD4L1Q9NU39 408 aa17.02■□□□□ 0.31
AC040174.1-201ENST00000563003 HDAC1Q13547 482 aaPredicted RBP17.01■□□□□ 0.31
AC040174.1-201ENST00000563003 FTSJ3Q8IY81 847 aaKnown RBP17.01■□□□□ 0.31
AC040174.1-201ENST00000563003 DZIP1LQ8IYY4 767 aaKnown RBP17.01■□□□□ 0.31
AC040174.1-201ENST00000563003 RUNDC1Q96C34 613 aa17.01■□□□□ 0.31
AC040174.1-201ENST00000563003 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.01■□□□□ 0.31
AC040174.1-201ENST00000563003 ZKSCAN2Q63HK3 967 aa17.01■□□□□ 0.31
AC040174.1-201ENST00000563003 EDC4Q6P2E9 1401 aaKnown RBP17.01■□□□□ 0.31
AC040174.1-201ENST00000563003 CDC42BPGQ6DT37 1551 aa17■□□□□ 0.31
AC040174.1-201ENST00000563003 AMOTL2Q9Y2J4 779 aa17■□□□□ 0.31
AC040174.1-201ENST00000563003 SETD1BQ9UPS6 1966 aaKnown RBP16.99■□□□□ 0.31
AC040174.1-201ENST00000563003 PLEKHG5O94827 1062 aa16.99■□□□□ 0.31
AC040174.1-201ENST00000563003 CD2BP2O95400 341 aaKnown RBP16.99■□□□□ 0.31
AC040174.1-201ENST00000563003 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.99■□□□□ 0.31
AC040174.1-201ENST00000563003 SSFA2P28290 1259 aa16.98■□□□□ 0.31
AC040174.1-201ENST00000563003 KLHL40Q2TBA0 621 aa16.98■□□□□ 0.31
AC040174.1-201ENST00000563003 KIF2CQ99661 725 aa16.98■□□□□ 0.31
AC040174.1-201ENST00000563003 DDX49Q9Y6V7 483 aaKnown RBP16.98■□□□□ 0.31
AC040174.1-201ENST00000563003 PTCH1Q13635 1447 aa16.98■□□□□ 0.31
AC040174.1-201ENST00000563003 AKAP12Q02952 1782 aa16.98■□□□□ 0.31
AC040174.1-201ENST00000563003 IBTKQ9P2D0 1353 aaPredicted RBP16.98■□□□□ 0.31
AC040174.1-201ENST00000563003 MON2Q7Z3U7 1717 aa16.98■□□□□ 0.31
AC040174.1-201ENST00000563003 ITSN1Q15811 1721 aa16.97■□□□□ 0.31
AC040174.1-201ENST00000563003 PRR36Q9H6K5 1346 aa16.97■□□□□ 0.31
AC040174.1-201ENST00000563003 GOLGA6L22H0YM25 854 aa16.97■□□□□ 0.31
AC040174.1-201ENST00000563003 HS1BP3Q53T59 392 aa16.96■□□□□ 0.31
AC040174.1-201ENST00000563003 NOL7Q9UMY1 257 aaKnown RBP16.96■□□□□ 0.31
AC040174.1-201ENST00000563003 UQCRHLA0A096LP55 91 aa16.96■□□□□ 0.31
AC040174.1-201ENST00000563003 UQCRHP07919 91 aa16.96■□□□□ 0.31
AC040174.1-201ENST00000563003 COL3A1P02461 1466 aaPredicted RBP16.96■□□□□ 0.31
AC040174.1-201ENST00000563003 ZNF142P52746 1687 aaPredicted RBP16.96■□□□□ 0.31
AC040174.1-201ENST00000563003 K7ELQ4 463 aaPredicted RBP16.95■□□□□ 0.3
AC040174.1-201ENST00000563003 ZNF500O60304 480 aaPredicted RBP16.95■□□□□ 0.3
AC040174.1-201ENST00000563003 CLEC17AQ6ZS10 378 aa16.95■□□□□ 0.3
AC040174.1-201ENST00000563003 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.95■□□□□ 0.3
AC040174.1-201ENST00000563003 NCKAP5LQ9HCH0 1330 aa16.95■□□□□ 0.3
AC040174.1-201ENST00000563003 IQSEC2Q5JU85 1478 aa16.95■□□□□ 0.3
AC040174.1-201ENST00000563003 U2AF1L5P0DN76 240 aaPredicted RBP16.95■□□□□ 0.3
AC040174.1-201ENST00000563003 U2AF1Q01081 240 aaKnown RBP eCLIP16.95■□□□□ 0.3
AC040174.1-201ENST00000563003 XPCQ01831 940 aaPredicted RBP16.95■□□□□ 0.3
AC040174.1-201ENST00000563003 PNPLA6Q8IY17 1366 aa16.95■□□□□ 0.3
AC040174.1-201ENST00000563003 PIK3R4Q99570 1358 aa16.95■□□□□ 0.3
AC040174.1-201ENST00000563003 BAG4O95429 457 aaKnown RBP16.94■□□□□ 0.3
AC040174.1-201ENST00000563003 NCBP3Q53F19 620 aaKnown RBP16.94■□□□□ 0.3
AC040174.1-201ENST00000563003 TRIM27P14373 513 aa16.94■□□□□ 0.3
AC040174.1-201ENST00000563003 ZNF445P59923 1031 aa16.94■□□□□ 0.3
AC040174.1-201ENST00000563003 CCDC27Q2M243 656 aa16.94■□□□□ 0.3
AC040174.1-201ENST00000563003 ITPRIPQ8IWB1 547 aa16.94■□□□□ 0.3
AC040174.1-201ENST00000563003 TOPAZ1Q8N9V7 1692 aa16.94■□□□□ 0.3
AC040174.1-201ENST00000563003 XRN1Q8IZH2 1706 aaKnown RBP16.94■□□□□ 0.3
AC040174.1-201ENST00000563003 GAS2L2Q8NHY3 880 aa16.93■□□□□ 0.3
AC040174.1-201ENST00000563003 DDX19BQ9UMR2 479 aa16.93■□□□□ 0.3
AC040174.1-201ENST00000563003 MAP2P11137 1827 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms